RNA–Protein interactions for RNA: ENST00000583800.1

SMCHD1-210, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-210ENST00000583800 NPY1RP25929 384 aa5.56□□□□□ -1.52
SMCHD1-210ENST00000583800 RCVRNP35243 200 aa5.56□□□□□ -1.52
SMCHD1-210ENST00000583800 SUB1P53999 127 aaKnown RBP eCLIP5.56□□□□□ -1.52
SMCHD1-210ENST00000583800 EMP1P54849 157 aa5.56□□□□□ -1.52
SMCHD1-210ENST00000583800 PIGPP57054 158 aa5.56□□□□□ -1.52
SMCHD1-210ENST00000583800 RND3P61587 244 aa5.56□□□□□ -1.52
SMCHD1-210ENST00000583800 USF2Q15853 346 aaPredicted RBP5.56□□□□□ -1.52
SMCHD1-210ENST00000583800 LGALS9BQ3B8N2 356 aa5.56□□□□□ -1.52
SMCHD1-210ENST00000583800 KCTD21Q4G0X4 260 aa5.56□□□□□ -1.52
SMCHD1-210ENST00000583800 YTHDF1Q9BYJ9 559 aaKnown RBP5.56□□□□□ -1.52
SMCHD1-210ENST00000583800 ENY2Q9NPA8 101 aa5.56□□□□□ -1.52
SMCHD1-210ENST00000583800 GPR132Q9UNW8 380 aa5.56□□□□□ -1.52
SMCHD1-210ENST00000583800 TRAV30A0A087WSZ9 112 aa5.55□□□□□ -1.52
SMCHD1-210ENST00000583800 C3orf85A0A1B0GTC6 90 aa5.55□□□□□ -1.52
SMCHD1-210ENST00000583800 H3BMM0 161 aa5.55□□□□□ -1.52
SMCHD1-210ENST00000583800 NDUFB4O95168 129 aa5.55□□□□□ -1.52
SMCHD1-210ENST00000583800 IFNA10P01566 189 aa5.55□□□□□ -1.52
SMCHD1-210ENST00000583800 CD74P04233 296 aa5.55□□□□□ -1.52
SMCHD1-210ENST00000583800 IGLC1P0CG04 106 aa5.55□□□□□ -1.52
SMCHD1-210ENST00000583800 RPL5P46777 297 aaKnown RBP5.55□□□□□ -1.52
SMCHD1-210ENST00000583800 EIF2B2P49770 351 aaKnown RBP5.55□□□□□ -1.52
SMCHD1-210ENST00000583800 RND2P52198 227 aa5.55□□□□□ -1.52
SMCHD1-210ENST00000583800 FXYD7P58549 80 aa5.55□□□□□ -1.52
SMCHD1-210ENST00000583800 DEFB1P60022 68 aa5.55□□□□□ -1.52
SMCHD1-210ENST00000583800 NUTF2P61970 127 aaKnown RBP5.55□□□□□ -1.52
SMCHD1-210ENST00000583800 DLK1P80370 383 aa5.55□□□□□ -1.52
SMCHD1-210ENST00000583800 TRIM16LQ309B1 348 aa5.55□□□□□ -1.52
SMCHD1-210ENST00000583800 BSXQ3C1V8 233 aa5.55□□□□□ -1.52
SMCHD1-210ENST00000583800 SP6Q3SY56 376 aa5.55□□□□□ -1.52
SMCHD1-210ENST00000583800 PRSS54Q6PEW0 395 aa5.55□□□□□ -1.52
SMCHD1-210ENST00000583800 ZNF705AQ6ZN79 300 aaPredicted RBP5.55□□□□□ -1.52
SMCHD1-210ENST00000583800 Q6ZR54 194 aa5.55□□□□□ -1.52
SMCHD1-210ENST00000583800 LHFPL1Q86WI0 220 aa5.55□□□□□ -1.52
SMCHD1-210ENST00000583800 SLC24A4Q8NFF2 622 aa5.55□□□□□ -1.52
SMCHD1-210ENST00000583800 OR1S2Q8NGQ3 325 aa5.55□□□□□ -1.52
SMCHD1-210ENST00000583800 RNASE11Q8TAA1 199 aaKnown RBP5.55□□□□□ -1.52
SMCHD1-210ENST00000583800 C1QTNF4Q9BXJ3 329 aa5.55□□□□□ -1.52
SMCHD1-210ENST00000583800 Q9H521 79 aa5.55□□□□□ -1.52
SMCHD1-210ENST00000583800 GPN1Q9HCN4 374 aaPredicted RBP5.55□□□□□ -1.52
SMCHD1-210ENST00000583800 COMMD3Q9UBI1 195 aa5.55□□□□□ -1.52
SMCHD1-210ENST00000583800 IGHV3OR16-12A0A075B7B8 117 aa5.54□□□□□ -1.52
SMCHD1-210ENST00000583800 RPS10-NUDT3A0A1W2PQS6 291 aa5.54□□□□□ -1.52
SMCHD1-210ENST00000583800 ZNF705FA8MVS1 300 aaPredicted RBP5.54□□□□□ -1.52
SMCHD1-210ENST00000583800 ATG12O94817 140 aa5.54□□□□□ -1.52
SMCHD1-210ENST00000583800 ATP6V1G2O95670 118 aa5.54□□□□□ -1.52
SMCHD1-210ENST00000583800 IFNA21P01568 189 aa5.54□□□□□ -1.52
SMCHD1-210ENST00000583800 IGKV3-20P01619 116 aa5.54□□□□□ -1.52
SMCHD1-210ENST00000583800 IL4P05112 153 aa5.54□□□□□ -1.52
SMCHD1-210ENST00000583800 ZNF705DP0CH99 300 aaPredicted RBP5.54□□□□□ -1.52
SMCHD1-210ENST00000583800 ZNF705BP0CI00 300 aaPredicted RBP5.54□□□□□ -1.52
SMCHD1-210ENST00000583800 SPART-AS1P0CW21 52 aa5.54□□□□□ -1.52
SMCHD1-210ENST00000583800 HLA-DRB4P13762 266 aa5.54□□□□□ -1.52
SMCHD1-210ENST00000583800 HTN3P15516 51 aa5.54□□□□□ -1.52
SMCHD1-210ENST00000583800 OR10J1P30954 320 aa5.54□□□□□ -1.52
SMCHD1-210ENST00000583800 AP2S1P53680 142 aaPredicted RBP5.54□□□□□ -1.52
SMCHD1-210ENST00000583800 SNRPD3P62318 126 aaKnown RBP5.54□□□□□ -1.52
SMCHD1-210ENST00000583800 DHODHQ02127 395 aa5.54□□□□□ -1.52
SMCHD1-210ENST00000583800 GDF5OSQ5U4N7 250 aa5.54□□□□□ -1.52
SMCHD1-210ENST00000583800 SIGLEC15Q6ZMC9 328 aa5.54□□□□□ -1.52
SMCHD1-210ENST00000583800 Q6ZNX1 250 aa5.54□□□□□ -1.52
SMCHD1-210ENST00000583800 NRARPQ7Z6K4 114 aa5.54□□□□□ -1.52
SMCHD1-210ENST00000583800 Q8WTZ3 238 aa5.54□□□□□ -1.52
SMCHD1-210ENST00000583800 YIPF6Q96EC8 236 aa5.54□□□□□ -1.52
SMCHD1-210ENST00000583800 ZNF503Q96F45 646 aa5.54□□□□□ -1.52
SMCHD1-210ENST00000583800 ZNF486Q96H40 463 aaPredicted RBP5.54□□□□□ -1.52
SMCHD1-210ENST00000583800 NRN1Q9NPD7 142 aa5.54□□□□□ -1.52
SMCHD1-210ENST00000583800 HLA-DRB4X5D2U9 266 aa5.54□□□□□ -1.52
SMCHD1-210ENST00000583800 APOBP04114 4563 aaKnown RBP5.53□□□□□ -1.52
SMCHD1-210ENST00000583800 SMIM31A0A1B0GVY4 71 aa5.53□□□□□ -1.52
SMCHD1-210ENST00000583800 BUB3O43684 328 aa5.53□□□□□ -1.52
SMCHD1-210ENST00000583800 HPGDSO60760 199 aa5.53□□□□□ -1.52
SMCHD1-210ENST00000583800 TSC22D2O75157 780 aa5.53□□□□□ -1.52
SMCHD1-210ENST00000583800 APOA1P02647 267 aa5.53□□□□□ -1.52
SMCHD1-210ENST00000583800 CD3DP04234 171 aa5.53□□□□□ -1.52
SMCHD1-210ENST00000583800 ELK1P19419 428 aa5.53□□□□□ -1.52
SMCHD1-210ENST00000583800 UCP1P25874 307 aa5.53□□□□□ -1.52
SMCHD1-210ENST00000583800 HTR2BP41595 481 aa5.53□□□□□ -1.52
SMCHD1-210ENST00000583800 YPEL3P61236 119 aaPredicted RBP5.53□□□□□ -1.52
SMCHD1-210ENST00000583800 SNRPEP62304 92 aaKnown RBP5.53□□□□□ -1.52
SMCHD1-210ENST00000583800 RNASE10Q5GAN6 216 aaKnown RBP5.53□□□□□ -1.52
SMCHD1-210ENST00000583800 FAM222AQ5U5X8 452 aa5.53□□□□□ -1.52
SMCHD1-210ENST00000583800 GSG1LQ6UXU4 331 aa5.53□□□□□ -1.52
SMCHD1-210ENST00000583800 OR4D10Q8NGI6 311 aa5.53□□□□□ -1.52
SMCHD1-210ENST00000583800 LHFPL5Q8TAF8 219 aa5.53□□□□□ -1.52
SMCHD1-210ENST00000583800 ATG101Q9BSB4 218 aa5.53□□□□□ -1.52
SMCHD1-210ENST00000583800 DNAJC4Q9NNZ3 241 aa5.53□□□□□ -1.52
SMCHD1-210ENST00000583800 COPZ2Q9P299 210 aa5.53□□□□□ -1.52
SMCHD1-210ENST00000583800 KLK11Q9UBX7 282 aa5.53□□□□□ -1.52
SMCHD1-210ENST00000583800 TMEM189A5PLL7 270 aa5.52□□□□□ -1.53
SMCHD1-210ENST00000583800 RHODO00212 210 aa5.52□□□□□ -1.53
SMCHD1-210ENST00000583800 TOMM40O96008 361 aa5.52□□□□□ -1.53
SMCHD1-210ENST00000583800 OR5AC1P0C628 307 aa5.52□□□□□ -1.53
SMCHD1-210ENST00000583800 SLC25A4P12235 298 aa5.52□□□□□ -1.53
SMCHD1-210ENST00000583800 TNFSF8P32971 234 aa5.52□□□□□ -1.53
SMCHD1-210ENST00000583800 NKX2-1P43699 371 aaPredicted RBP5.52□□□□□ -1.53
SMCHD1-210ENST00000583800 SPCS3P61009 180 aa5.52□□□□□ -1.53
SMCHD1-210ENST00000583800 NCS1P62166 190 aa5.52□□□□□ -1.53
SMCHD1-210ENST00000583800 BLOC1S1P78537 153 aa5.52□□□□□ -1.53
SMCHD1-210ENST00000583800 GAGE2BQ13066 116 aa5.52□□□□□ -1.53
SMCHD1-210ENST00000583800 UBE2V1Q13404 147 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms