RNA–Protein interactions for RNA: ENST00000578664.1

GAPLINC-201, gastric adenocarcinoma associated, positive CD44 regulator, long intergenic non-coding RNA, humanhuman

TSL 3

Gene GAPLINC, Length 440 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPLINC-201ENST00000578664 AMN1Q8IY45 258 aa2.92□□□□□ -1.94
GAPLINC-201ENST00000578664 TSTD1Q8NFU3 115 aa2.92□□□□□ -1.94
GAPLINC-201ENST00000578664 OR4K13Q8NH42 304 aa2.92□□□□□ -1.94
GAPLINC-201ENST00000578664 TMEM158Q8WZ71 300 aa2.92□□□□□ -1.94
GAPLINC-201ENST00000578664 H1FXQ92522 213 aaKnown RBP2.92□□□□□ -1.94
GAPLINC-201ENST00000578664 TBL1YQ9BQ87 522 aa2.92□□□□□ -1.94
GAPLINC-201ENST00000578664 MND1Q9BWT6 205 aa2.92□□□□□ -1.94
GAPLINC-201ENST00000578664 OR8D2Q9GZM6 311 aa2.92□□□□□ -1.94
GAPLINC-201ENST00000578664 AICDAQ9GZX7 198 aa2.92□□□□□ -1.94
GAPLINC-201ENST00000578664 TUBA4BQ9H853 241 aa2.92□□□□□ -1.94
GAPLINC-201ENST00000578664 CACYBPQ9HB71 228 aaKnown RBP2.92□□□□□ -1.94
GAPLINC-201ENST00000578664 FAM60AQ9NP50 221 aa2.92□□□□□ -1.94
GAPLINC-201ENST00000578664 COA4Q9NYJ1 87 aa2.92□□□□□ -1.94
GAPLINC-201ENST00000578664 C21orf62Q9NYP8 219 aa2.92□□□□□ -1.94
GAPLINC-201ENST00000578664 TRAPPC2LQ9UL33 140 aa2.92□□□□□ -1.94
GAPLINC-201ENST00000578664 ANKRD11Q6UB99 2663 aaPredicted RBP2.92□□□□□ -1.94
GAPLINC-201ENST00000578664 TRIP11Q15643 1979 aa2.91□□□□□ -1.94
GAPLINC-201ENST00000578664 PDCD11Q14690 1871 aaKnown RBP2.91□□□□□ -1.94
GAPLINC-201ENST00000578664 IGKV1D-43A0A0B4J1Z2 117 aa2.91□□□□□ -1.94
GAPLINC-201ENST00000578664 IGHV1-3A0A0C4DH29 117 aa2.91□□□□□ -1.94
GAPLINC-201ENST00000578664 A0A0J9YWU9 116 aa2.91□□□□□ -1.94
GAPLINC-201ENST00000578664 A0A1W2PP18 115 aa2.91□□□□□ -1.94
GAPLINC-201ENST00000578664 FABP5P3A8MUU1 101 aa2.91□□□□□ -1.94
GAPLINC-201ENST00000578664 LEUTXA8MZ59 168 aa2.91□□□□□ -1.94
GAPLINC-201ENST00000578664 C19orf84I3L1E1 186 aa2.91□□□□□ -1.94
GAPLINC-201ENST00000578664 ZNF324O75467 553 aaPredicted RBP2.91□□□□□ -1.94
GAPLINC-201ENST00000578664 ZNF432O94892 652 aa2.91□□□□□ -1.94
GAPLINC-201ENST00000578664 S100A8P05109 93 aa2.91□□□□□ -1.94
GAPLINC-201ENST00000578664 OR5AC1P0C628 307 aa2.91□□□□□ -1.94
GAPLINC-201ENST00000578664 IL1RNP18510 177 aa2.91□□□□□ -1.94
GAPLINC-201ENST00000578664 KDELR1P24390 212 aa2.91□□□□□ -1.94
GAPLINC-201ENST00000578664 CRIP2P52943 208 aaPredicted RBP2.91□□□□□ -1.94
GAPLINC-201ENST00000578664 TAS2R30P59541 319 aa2.91□□□□□ -1.94
GAPLINC-201ENST00000578664 KRTAP10-11P60412 298 aa2.91□□□□□ -1.94
GAPLINC-201ENST00000578664 HIST1H1AQ02539 215 aaPredicted RBP2.91□□□□□ -1.94
GAPLINC-201ENST00000578664 SLC38A11Q08AI6 406 aa2.91□□□□□ -1.94
GAPLINC-201ENST00000578664 HNRNPA0Q13151 305 aaKnown RBP2.91□□□□□ -1.94
GAPLINC-201ENST00000578664 RRN3P1Q2M238 152 aa2.91□□□□□ -1.94
GAPLINC-201ENST00000578664 C15orf32Q32M92 178 aa2.91□□□□□ -1.94
GAPLINC-201ENST00000578664 LGALS9BQ3B8N2 356 aa2.91□□□□□ -1.94
GAPLINC-201ENST00000578664 TMEM69Q5SWH9 247 aa2.91□□□□□ -1.94
GAPLINC-201ENST00000578664 LGALS9CQ6DKI2 356 aa2.91□□□□□ -1.94
GAPLINC-201ENST00000578664 SSX8Q7RTT4 187 aa2.91□□□□□ -1.94
GAPLINC-201ENST00000578664 LINC01551Q86U37 167 aa2.91□□□□□ -1.94
GAPLINC-201ENST00000578664 OR4C16Q8NGL9 310 aa2.91□□□□□ -1.94
GAPLINC-201ENST00000578664 OR5W2Q8NH69 310 aa2.91□□□□□ -1.94
GAPLINC-201ENST00000578664 RNASE6Q93091 150 aaKnown RBP2.91□□□□□ -1.94
GAPLINC-201ENST00000578664 SLC25A46Q96AG3 418 aa2.91□□□□□ -1.94
GAPLINC-201ENST00000578664 BORCS8Q96FH0 119 aa2.91□□□□□ -1.94
GAPLINC-201ENST00000578664 TEX37Q96LM6 180 aa2.91□□□□□ -1.94
GAPLINC-201ENST00000578664 NDFIP1Q9BT67 221 aa2.91□□□□□ -1.94
GAPLINC-201ENST00000578664 TSSK6Q9BXA6 273 aa2.91□□□□□ -1.94
GAPLINC-201ENST00000578664 LINC00470Q9BZP3 86 aa2.91□□□□□ -1.94
GAPLINC-201ENST00000578664 TP73-AS1Q9UF72 201 aa2.91□□□□□ -1.94
GAPLINC-201ENST00000578664 ZNF580Q9UK33 172 aa2.91□□□□□ -1.94
GAPLINC-201ENST00000578664 MCTS1Q9ULC4 181 aaKnown RBP2.91□□□□□ -1.94
GAPLINC-201ENST00000578664 HS3ST2Q9Y278 367 aa2.91□□□□□ -1.94
GAPLINC-201ENST00000578664 PHLDA3Q9Y5J5 127 aa2.91□□□□□ -1.94
GAPLINC-201ENST00000578664 TMEM14AQ9Y6G1 99 aa2.91□□□□□ -1.94
GAPLINC-201ENST00000578664 GPR179Q6PRD1 2367 aa2.91□□□□□ -1.94
GAPLINC-201ENST00000578664 TENM4Q6N022 2769 aa2.91□□□□□ -1.94
GAPLINC-201ENST00000578664 EML5Q05BV3 1969 aa2.91□□□□□ -1.94
GAPLINC-201ENST00000578664 KIF26AQ9ULI4 1882 aaPredicted RBP2.9□□□□□ -1.94
GAPLINC-201ENST00000578664 GREB1Q4ZG55 1949 aa2.9□□□□□ -1.95
GAPLINC-201ENST00000578664 TRBV7-6A0A0J9YX20 115 aa2.9□□□□□ -1.95
GAPLINC-201ENST00000578664 TMEM223A0PJW6 202 aa2.9□□□□□ -1.95
GAPLINC-201ENST00000578664 IRGMA1A4Y4 181 aa2.9□□□□□ -1.95
GAPLINC-201ENST00000578664 H3BQF6 201 aa2.9□□□□□ -1.95
GAPLINC-201ENST00000578664 LY6LH3BQJ8 138 aa2.9□□□□□ -1.95
GAPLINC-201ENST00000578664 GABARAPH6UMI1 98 aa2.9□□□□□ -1.95
GAPLINC-201ENST00000578664 J3QQQ9 107 aa2.9□□□□□ -1.95
GAPLINC-201ENST00000578664 M0R2Z0 102 aa2.9□□□□□ -1.95
GAPLINC-201ENST00000578664 RBFOX2O43251 390 aaKnown RBP eCLIP2.9□□□□□ -1.95
GAPLINC-201ENST00000578664 GGCTO75223 188 aaKnown RBP2.9□□□□□ -1.95
GAPLINC-201ENST00000578664 PROSCO94903 275 aa2.9□□□□□ -1.95
GAPLINC-201ENST00000578664 NDUFB2O95178 105 aa2.9□□□□□ -1.95
GAPLINC-201ENST00000578664 METTL15P1P0C7V9 234 aa2.9□□□□□ -1.95
GAPLINC-201ENST00000578664 NPPCP23582 126 aa2.9□□□□□ -1.95
GAPLINC-201ENST00000578664 FKBP2P26885 142 aaKnown RBP2.9□□□□□ -1.95
GAPLINC-201ENST00000578664 Q5XG85 94 aa2.9□□□□□ -1.95
GAPLINC-201ENST00000578664 RASL11AQ6T310 242 aa2.9□□□□□ -1.95
GAPLINC-201ENST00000578664 CIRBP-AS1Q8TBR5 109 aa2.9□□□□□ -1.95
GAPLINC-201ENST00000578664 SLAMF6Q96DU3 332 aa2.9□□□□□ -1.95
GAPLINC-201ENST00000578664 C14orf144Q96I85 54 aa2.9□□□□□ -1.95
GAPLINC-201ENST00000578664 CARD19Q96LW7 228 aa2.9□□□□□ -1.95
GAPLINC-201ENST00000578664 PRADC1Q9BSG0 188 aa2.9□□□□□ -1.95
GAPLINC-201ENST00000578664 SMIM3Q9BZL3 60 aa2.9□□□□□ -1.95
GAPLINC-201ENST00000578664 YIPF3Q9GZM5 350 aa2.9□□□□□ -1.95
GAPLINC-201ENST00000578664 XAGE1AQ9HD64 81 aa2.9□□□□□ -1.95
GAPLINC-201ENST00000578664 NAT8BQ9UHF3 227 aa2.9□□□□□ -1.95
GAPLINC-201ENST00000578664 ZNF230Q9UIE0 474 aaPredicted RBP2.9□□□□□ -1.95
GAPLINC-201ENST00000578664 FUT9Q9Y231 359 aa2.9□□□□□ -1.95
GAPLINC-201ENST00000578664 YLPM1P49750 1951 aaKnown RBP2.9□□□□□ -1.95
GAPLINC-201ENST00000578664 MGAQ8IWI9 3026 aa2.9□□□□□ -1.95
GAPLINC-201ENST00000578664 ATRXP46100 2492 aa2.9□□□□□ -1.95
GAPLINC-201ENST00000578664 CEP295Q9C0D2 2601 aa2.89□□□□□ -1.95
GAPLINC-201ENST00000578664 TICRRQ7Z2Z1 1910 aa2.89□□□□□ -1.95
GAPLINC-201ENST00000578664 ATG2BQ96BY7 2078 aa2.89□□□□□ -1.95
GAPLINC-201ENST00000578664 ASH1LQ9NR48 2969 aaKnown RBP2.89□□□□□ -1.95
GAPLINC-201ENST00000578664 IGKV2D-30A0A075B6S6 120 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms