RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 SRRQ9GZT4 340 aa3.6□□□□□ -1.83
HERC1-213ENST00000561359 ACOT13Q9NPJ3 140 aa3.6□□□□□ -1.83
HERC1-213ENST00000561359 NUDT15Q9NV35 164 aa3.6□□□□□ -1.83
HERC1-213ENST00000561359 SCN3BQ9NY72 215 aa3.6□□□□□ -1.83
HERC1-213ENST00000561359 SCP2D1Q9UJQ7 156 aa3.6□□□□□ -1.83
HERC1-213ENST00000561359 V9GYH0 126 aa3.6□□□□□ -1.83
HERC1-213ENST00000561359 A0A1W2PPK0 400 aa3.59□□□□□ -1.83
HERC1-213ENST00000561359 C5orf52A6NGY3 159 aa3.59□□□□□ -1.83
HERC1-213ENST00000561359 HSBP1L1C9JCN9 74 aa3.59□□□□□ -1.83
HERC1-213ENST00000561359 G3V2T6 193 aa3.59□□□□□ -1.83
HERC1-213ENST00000561359 K7EIM0 57 aa3.59□□□□□ -1.83
HERC1-213ENST00000561359 TCAPO15273 167 aa3.59□□□□□ -1.83
HERC1-213ENST00000561359 SIVA1O15304 175 aa3.59□□□□□ -1.83
HERC1-213ENST00000561359 FABP7O15540 132 aa3.59□□□□□ -1.83
HERC1-213ENST00000561359 RGS10O43665 173 aa3.59□□□□□ -1.83
HERC1-213ENST00000561359 MPC2O95563 127 aa3.59□□□□□ -1.83
HERC1-213ENST00000561359 HRASP01112 189 aa3.59□□□□□ -1.83
HERC1-213ENST00000561359 MBP02144 154 aa3.59□□□□□ -1.83
HERC1-213ENST00000561359 SERPINE2P07093 398 aa3.59□□□□□ -1.83
HERC1-213ENST00000561359 MT1HL1P0DM35 61 aa3.59□□□□□ -1.83
HERC1-213ENST00000561359 CELP19835 753 aa3.59□□□□□ -1.83
HERC1-213ENST00000561359 NPPCP23582 126 aa3.59□□□□□ -1.83
HERC1-213ENST00000561359 TNFSF8P32971 234 aa3.59□□□□□ -1.83
HERC1-213ENST00000561359 P2RY1P47900 373 aa3.59□□□□□ -1.83
HERC1-213ENST00000561359 MFAP4P55083 255 aa3.59□□□□□ -1.83
HERC1-213ENST00000561359 TAS2R43P59537 309 aa3.59□□□□□ -1.83
HERC1-213ENST00000561359 RPP30P78346 268 aaKnown RBP3.59□□□□□ -1.83
HERC1-213ENST00000561359 DHODHQ02127 395 aa3.59□□□□□ -1.83
HERC1-213ENST00000561359 OR5I1Q13606 314 aa3.59□□□□□ -1.83
HERC1-213ENST00000561359 KLF9Q13886 244 aaPredicted RBP3.59□□□□□ -1.83
HERC1-213ENST00000561359 FCN2Q15485 313 aa3.59□□□□□ -1.83
HERC1-213ENST00000561359 TIMM50Q3ZCQ8 353 aa3.59□□□□□ -1.83
HERC1-213ENST00000561359 LAIR2Q6ISS4 152 aa3.59□□□□□ -1.83
HERC1-213ENST00000561359 TOMM20LQ6UXN7 152 aa3.59□□□□□ -1.83
HERC1-213ENST00000561359 MS4A15Q8N5U1 240 aa3.59□□□□□ -1.83
HERC1-213ENST00000561359 NANOGP1Q8N7R0 232 aa3.59□□□□□ -1.83
HERC1-213ENST00000561359 OR4C16Q8NGL9 310 aa3.59□□□□□ -1.83
HERC1-213ENST00000561359 DCANP1Q8TF63 244 aa3.59□□□□□ -1.83
HERC1-213ENST00000561359 TCTEX1D2Q8WW35 142 aa3.59□□□□□ -1.83
HERC1-213ENST00000561359 GLMPQ8WWB7 406 aa3.59□□□□□ -1.83
HERC1-213ENST00000561359 MOB3AQ96BX8 217 aa3.59□□□□□ -1.83
HERC1-213ENST00000561359 NARS2Q96I59 477 aaKnown RBP3.59□□□□□ -1.83
HERC1-213ENST00000561359 C14orf144Q96I85 54 aa3.59□□□□□ -1.83
HERC1-213ENST00000561359 CMSS1Q9BQ75 279 aaKnown RBP3.59□□□□□ -1.83
HERC1-213ENST00000561359 TMEM208Q9BTX3 173 aa3.59□□□□□ -1.83
HERC1-213ENST00000561359 SSR3Q9UNL2 185 aa3.59□□□□□ -1.83
HERC1-213ENST00000561359 MUC2Q02817 5179 aa3.58□□□□□ -1.84
HERC1-213ENST00000561359 TRAV26-1A0A087WT03 109 aa3.58□□□□□ -1.84
HERC1-213ENST00000561359 TRBV6-7A0A0A0MS04 114 aa3.58□□□□□ -1.84
HERC1-213ENST00000561359 TRAV3A0A0B4J244 114 aa3.58□□□□□ -1.84
HERC1-213ENST00000561359 A0A0J9YY99 117 aa3.58□□□□□ -1.84
HERC1-213ENST00000561359 LOC100130705A0A1B0GUX0 176 aa3.58□□□□□ -1.84
HERC1-213ENST00000561359 C7orf66A4D0T2 115 aa3.58□□□□□ -1.84
HERC1-213ENST00000561359 CBY3A6NI87 242 aa3.58□□□□□ -1.84
HERC1-213ENST00000561359 FAM74A7A6NL05 159 aa3.58□□□□□ -1.84
HERC1-213ENST00000561359 PDCD5O14737 125 aa3.58□□□□□ -1.84
HERC1-213ENST00000561359 GNG7O60262 68 aa3.58□□□□□ -1.84
HERC1-213ENST00000561359 HPGDSO60760 199 aa3.58□□□□□ -1.84
HERC1-213ENST00000561359 RAB3DO95716 219 aa3.58□□□□□ -1.84
HERC1-213ENST00000561359 IGHV3-48P01763 117 aa3.58□□□□□ -1.84
HERC1-213ENST00000561359 NMBP08949 121 aa3.58□□□□□ -1.84
HERC1-213ENST00000561359 LINC00614P0C842 121 aa3.58□□□□□ -1.84
HERC1-213ENST00000561359 UBBP0CG47 229 aa3.58□□□□□ -1.84
HERC1-213ENST00000561359 ANXA3P12429 323 aa3.58□□□□□ -1.84
HERC1-213ENST00000561359 HLA-DRB4P13762 266 aa3.58□□□□□ -1.84
HERC1-213ENST00000561359 RAB3BP20337 219 aa3.58□□□□□ -1.84
HERC1-213ENST00000561359 PVALBP20472 110 aaPredicted RBP3.58□□□□□ -1.84
HERC1-213ENST00000561359 PSMB9P28065 219 aa3.58□□□□□ -1.84
HERC1-213ENST00000561359 KRTAP10-4P60372 401 aaPredicted RBP3.58□□□□□ -1.84
HERC1-213ENST00000561359 RAB5BP61020 215 aa3.58□□□□□ -1.84
HERC1-213ENST00000561359 LSM3P62310 102 aaKnown RBP3.58□□□□□ -1.84
HERC1-213ENST00000561359 RPL30P62888 115 aaKnown RBP3.58□□□□□ -1.84
HERC1-213ENST00000561359 WT1-ASQ06250 92 aa3.58□□□□□ -1.84
HERC1-213ENST00000561359 GAGE1Q13065 139 aa3.58□□□□□ -1.84
HERC1-213ENST00000561359 RAB32Q13637 225 aa3.58□□□□□ -1.84
HERC1-213ENST00000561359 TBCEQ15813 527 aaPredicted RBP3.58□□□□□ -1.84
HERC1-213ENST00000561359 ZNF79Q15937 498 aa3.58□□□□□ -1.84
HERC1-213ENST00000561359 LGALSLQ3ZCW2 172 aaPredicted RBP3.58□□□□□ -1.84
HERC1-213ENST00000561359 FAM74A3Q4VXF1 159 aa3.58□□□□□ -1.84
HERC1-213ENST00000561359 LELP1Q5T871 98 aa3.58□□□□□ -1.84
HERC1-213ENST00000561359 RPL22L1Q6P5R6 122 aaKnown RBP3.58□□□□□ -1.84
HERC1-213ENST00000561359 TMPRSS11AQ6ZMR5 421 aa3.58□□□□□ -1.84
HERC1-213ENST00000561359 C1orf158Q8N1D5 194 aa3.58□□□□□ -1.84
HERC1-213ENST00000561359 RXFP4Q8TDU9 374 aa3.58□□□□□ -1.84
HERC1-213ENST00000561359 SLC25A46Q96AG3 418 aa3.58□□□□□ -1.84
HERC1-213ENST00000561359 CABLES2Q9BTV7 478 aa3.58□□□□□ -1.84
HERC1-213ENST00000561359 HINT2Q9BX68 163 aa3.58□□□□□ -1.84
HERC1-213ENST00000561359 BET1LQ9NYM9 111 aa3.58□□□□□ -1.84
HERC1-213ENST00000561359 F11RQ9Y624 299 aaKnown RBP3.58□□□□□ -1.84
HERC1-213ENST00000561359 HLA-DRB4X5D2U9 266 aa3.58□□□□□ -1.84
HERC1-213ENST00000561359 DNAH8Q96JB1 4490 aa3.58□□□□□ -1.84
HERC1-213ENST00000561359 A0A0A6YYD4 124 aa3.57□□□□□ -1.84
HERC1-213ENST00000561359 ZNF705GA8MUZ8 300 aaPredicted RBP3.57□□□□□ -1.84
HERC1-213ENST00000561359 FAM90A26D6RGX4 464 aa3.57□□□□□ -1.84
HERC1-213ENST00000561359 TEX46H3BTG2 121 aa3.57□□□□□ -1.84
HERC1-213ENST00000561359 PLA2G10O15496 165 aa3.57□□□□□ -1.84
HERC1-213ENST00000561359 SOCS1O15524 211 aa3.57□□□□□ -1.84
HERC1-213ENST00000561359 PRM2P04554 102 aa3.57□□□□□ -1.84
HERC1-213ENST00000561359 IGKV2-30P06310 120 aa3.57□□□□□ -1.84
HERC1-213ENST00000561359 OR4E1P0C645 316 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms