RNA–Protein interactions for RNA: ENST00000560962.5

USP3-AS1-208, USP3 antisense RNA 1, humanhuman

TSL 2

Gene USP3-AS1, Length 1,807 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-AS1-208ENST00000560962 TRGV3P03979 118 aa13.86□□□□□ -0.19
USP3-AS1-208ENST00000560962 SUN5Q8TC36 379 aa13.86□□□□□ -0.19
USP3-AS1-208ENST00000560962 RNF125Q96EQ8 232 aa13.86□□□□□ -0.19
USP3-AS1-208ENST00000560962 TVP23CQ96ET8 276 aa13.86□□□□□ -0.19
USP3-AS1-208ENST00000560962 TXNDC17Q9BRA2 123 aa13.86□□□□□ -0.19
USP3-AS1-208ENST00000560962 SLC25A39Q9BZJ4 359 aaPredicted RBP13.86□□□□□ -0.19
USP3-AS1-208ENST00000560962 TLN2Q9Y4G6 2542 aa13.86□□□□□ -0.19
USP3-AS1-208ENST00000560962 IGHV3-35A0A0C4DH35 117 aa13.85□□□□□ -0.19
USP3-AS1-208ENST00000560962 WI2-2373I1.2A0A1W2PRP0 233 aa13.85□□□□□ -0.19
USP3-AS1-208ENST00000560962 F6UZH7 168 aa13.85□□□□□ -0.19
USP3-AS1-208ENST00000560962 H3BUA1 57 aa13.85□□□□□ -0.19
USP3-AS1-208ENST00000560962 NDUFS6O75380 124 aaKnown RBP13.85□□□□□ -0.19
USP3-AS1-208ENST00000560962 CLEC3BP05452 202 aa13.85□□□□□ -0.19
USP3-AS1-208ENST00000560962 ADMP35318 185 aa13.85□□□□□ -0.19
USP3-AS1-208ENST00000560962 ATP5G2Q06055 141 aa13.85□□□□□ -0.19
USP3-AS1-208ENST00000560962 TMEM95Q3KNT9 176 aa13.85□□□□□ -0.19
USP3-AS1-208ENST00000560962 CLEC19AQ6UXS0 136 aa13.85□□□□□ -0.19
USP3-AS1-208ENST00000560962 EEF1AKMT3Q96AZ1 226 aa13.85□□□□□ -0.19
USP3-AS1-208ENST00000560962 SCO2A0A1W2PP80 73 aa13.85□□□□□ -0.19
USP3-AS1-208ENST00000560962 SCGB2A1O75556 95 aa13.85□□□□□ -0.19
USP3-AS1-208ENST00000560962 NDUFB4O95168 129 aa13.85□□□□□ -0.19
USP3-AS1-208ENST00000560962 FXYD5Q96DB9 178 aa13.85□□□□□ -0.19
USP3-AS1-208ENST00000560962 CCDC140Q96MF4 163 aa13.85□□□□□ -0.19
USP3-AS1-208ENST00000560962 MYO9AB2RTY4 2548 aa13.85□□□□□ -0.19
USP3-AS1-208ENST00000560962 TPPP2P59282 170 aa13.84□□□□□ -0.19
USP3-AS1-208ENST00000560962 CFHR3Q02985 330 aa13.84□□□□□ -0.19
USP3-AS1-208ENST00000560962 USF2Q15853 346 aaPredicted RBP13.84□□□□□ -0.19
USP3-AS1-208ENST00000560962 NPFFR1Q9GZQ6 430 aa13.84□□□□□ -0.19
USP3-AS1-208ENST00000560962 GNB4Q9HAV0 340 aa13.84□□□□□ -0.19
USP3-AS1-208ENST00000560962 FAM223BA6NKX1 122 aa13.83□□□□□ -0.2
USP3-AS1-208ENST00000560962 OR2C1O95371 312 aa13.83□□□□□ -0.2
USP3-AS1-208ENST00000560962 FAM223AQ8IWN6 122 aa13.83□□□□□ -0.2
USP3-AS1-208ENST00000560962 STXBP6Q8NFX7 210 aa13.83□□□□□ -0.2
USP3-AS1-208ENST00000560962 DUX5Q96PT3 197 aa13.83□□□□□ -0.2
USP3-AS1-208ENST00000560962 DERL1Q9BUN8 251 aa13.83□□□□□ -0.2
USP3-AS1-208ENST00000560962 PRSS22Q9GZN4 317 aa13.83□□□□□ -0.2
USP3-AS1-208ENST00000560962 SDF2L1Q9HCN8 221 aa13.83□□□□□ -0.2
USP3-AS1-208ENST00000560962 ARL2-SNX15V9GYD0 113 aa13.83□□□□□ -0.2
USP3-AS1-208ENST00000560962 TRBV7-1A0A0A6YYK4 115 aa13.83□□□□□ -0.2
USP3-AS1-208ENST00000560962 GGTLC3B5MD39 225 aa13.83□□□□□ -0.2
USP3-AS1-208ENST00000560962 SUMO1P63165 101 aaKnown RBP13.83□□□□□ -0.2
USP3-AS1-208ENST00000560962 RHEBQ15382 184 aa13.83□□□□□ -0.2
USP3-AS1-208ENST00000560962 TMEM241Q24JQ0 296 aa13.83□□□□□ -0.2
USP3-AS1-208ENST00000560962 BLNKQ8WV28 456 aa13.83□□□□□ -0.2
USP3-AS1-208ENST00000560962 SHANK2-AS3Q9BTD1 123 aa13.83□□□□□ -0.2
USP3-AS1-208ENST00000560962 NAT8Q9UHE5 227 aa13.83□□□□□ -0.2
USP3-AS1-208ENST00000560962 TMA7Q9Y2S6 64 aaKnown RBP13.83□□□□□ -0.2
USP3-AS1-208ENST00000560962 IGHV3OR16-8A0A075B7F1 116 aa13.82□□□□□ -0.2
USP3-AS1-208ENST00000560962 A0A1W2PRE2 83 aa13.82□□□□□ -0.2
USP3-AS1-208ENST00000560962 H3BRN7 92 aa13.82□□□□□ -0.2
USP3-AS1-208ENST00000560962 IGLV1-40P01703 118 aa13.82□□□□□ -0.2
USP3-AS1-208ENST00000560962 PF4V1P10720 104 aa13.82□□□□□ -0.2
USP3-AS1-208ENST00000560962 GP9P14770 177 aa13.82□□□□□ -0.2
USP3-AS1-208ENST00000560962 SMR3AQ99954 134 aa13.82□□□□□ -0.2
USP3-AS1-208ENST00000560962 KLK15Q9H2R5 256 aa13.82□□□□□ -0.2
USP3-AS1-208ENST00000560962 GAR1Q9NY12 217 aaKnown RBP13.82□□□□□ -0.2
USP3-AS1-208ENST00000560962 H3BTX0 84 aa13.81□□□□□ -0.2
USP3-AS1-208ENST00000560962 SCGB2A2Q13296 93 aa13.81□□□□□ -0.2
USP3-AS1-208ENST00000560962 LCNL1Q6ZST4 164 aa13.81□□□□□ -0.2
USP3-AS1-208ENST00000560962 ZNF414Q96IQ9 312 aa13.81□□□□□ -0.2
USP3-AS1-208ENST00000560962 ATP6V0BQ99437 205 aa13.81□□□□□ -0.2
USP3-AS1-208ENST00000560962 ZNF702PQ9H963 129 aa13.81□□□□□ -0.2
USP3-AS1-208ENST00000560962 ACANP16112 2415 aa13.81□□□□□ -0.2
USP3-AS1-208ENST00000560962 OTOGQ6ZRI0 2925 aa13.81□□□□□ -0.2
USP3-AS1-208ENST00000560962 NOTCH2Q04721 2471 aa13.81□□□□□ -0.2
USP3-AS1-208ENST00000560962 TGOLN2O43493 480 aa13.8□□□□□ -0.2
USP3-AS1-208ENST00000560962 NBEAP1P0C6P0 100 aa13.8□□□□□ -0.2
USP3-AS1-208ENST00000560962 CRYBB3P26998 211 aa13.8□□□□□ -0.2
USP3-AS1-208ENST00000560962 ZNF600Q6ZNG1 722 aa13.8□□□□□ -0.2
USP3-AS1-208ENST00000560962 ZNF329Q86UD4 541 aa13.8□□□□□ -0.2
USP3-AS1-208ENST00000560962 PPP5D1E7EU14 171 aa13.8□□□□□ -0.2
USP3-AS1-208ENST00000560962 LY6G6DO95868 133 aa13.8□□□□□ -0.2
USP3-AS1-208ENST00000560962 RANP62826 216 aaKnown RBP13.8□□□□□ -0.2
USP3-AS1-208ENST00000560962 ADIRFQ15847 76 aa13.8□□□□□ -0.2
USP3-AS1-208ENST00000560962 Q8N2B8 174 aa13.8□□□□□ -0.2
USP3-AS1-208ENST00000560962 USMG5Q96IX5 58 aa13.8□□□□□ -0.2
USP3-AS1-208ENST00000560962 ELOVL1Q9BW60 279 aa13.8□□□□□ -0.2
USP3-AS1-208ENST00000560962 SONP18583 2426 aaKnown RBP13.8□□□□□ -0.2
USP3-AS1-208ENST00000560962 ZNF98A6NK75 572 aa13.79□□□□□ -0.2
USP3-AS1-208ENST00000560962 TSPAN4O14817 238 aa13.79□□□□□ -0.2
USP3-AS1-208ENST00000560962 PNRC1Q12796 327 aaPredicted RBP13.79□□□□□ -0.2
USP3-AS1-208ENST00000560962 ZNF343Q6P1L6 599 aa13.79□□□□□ -0.2
USP3-AS1-208ENST00000560962 TOMM20LQ6UXN7 152 aa13.79□□□□□ -0.2
USP3-AS1-208ENST00000560962 C11orf52Q96A22 123 aa13.79□□□□□ -0.2
USP3-AS1-208ENST00000560962 SMCO4Q9NRQ5 59 aa13.79□□□□□ -0.2
USP3-AS1-208ENST00000560962 DNAJC9-AS1A6NH13 148 aa13.78□□□□□ -0.2
USP3-AS1-208ENST00000560962 IGHV3-11P01762 117 aa13.78□□□□□ -0.2
USP3-AS1-208ENST00000560962 IGHG4P01861 327 aa13.78□□□□□ -0.2
USP3-AS1-208ENST00000560962 RPL23P62829 140 aaKnown RBP13.78□□□□□ -0.2
USP3-AS1-208ENST00000560962 TMEM14CQ9P0S9 112 aa13.78□□□□□ -0.2
USP3-AS1-208ENST00000560962 ANK3Q12955 4377 aaKnown RBP13.78□□□□□ -0.2
USP3-AS1-208ENST00000560962 AURKAIP1Q9NWT8 199 aaPredicted RBP13.78□□□□□ -0.2
USP3-AS1-208ENST00000560962 RABAC1Q9UI14 185 aa13.78□□□□□ -0.2
USP3-AS1-208ENST00000560962 TMEM89A2RUT3 159 aa13.77□□□□□ -0.21
USP3-AS1-208ENST00000560962 PGPEP1LA6NFU8 196 aa13.77□□□□□ -0.21
USP3-AS1-208ENST00000560962 HIST1H1EP10412 219 aaKnown RBP13.77□□□□□ -0.21
USP3-AS1-208ENST00000560962 RAB9AP51151 201 aa13.77□□□□□ -0.21
USP3-AS1-208ENST00000560962 C10orf99Q6UWK7 81 aa13.77□□□□□ -0.21
USP3-AS1-208ENST00000560962 S100A7AQ86SG5 101 aa13.77□□□□□ -0.21
USP3-AS1-208ENST00000560962 BPIFA4PQ86YQ2 179 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms