RNA–Protein interactions for RNA: ENST00000559151.1

CASC4-208, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 883 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-208ENST00000559151 TSC22D3Q99576 134 aa4.34□□□□□ -1.71
CASC4-208ENST00000559151 WDR61Q9GZS3 305 aaKnown RBP4.34□□□□□ -1.71
CASC4-208ENST00000559151 NDUFAF1Q9Y375 327 aa4.34□□□□□ -1.71
CASC4-208ENST00000559151 GBF1Q92538 1859 aa4.34□□□□□ -1.71
CASC4-208ENST00000559151 CHD8Q9HCK8 2581 aa4.34□□□□□ -1.72
CASC4-208ENST00000559151 WDR87Q6ZQQ6 2873 aa4.34□□□□□ -1.72
CASC4-208ENST00000559151 SETXQ7Z333 2677 aaKnown RBP4.33□□□□□ -1.72
CASC4-208ENST00000559151 PTPRSQ13332 1948 aa4.33□□□□□ -1.72
CASC4-208ENST00000559151 ZNF860A6NHJ4 632 aa4.33□□□□□ -1.72
CASC4-208ENST00000559151 FADS1O60427 444 aa4.33□□□□□ -1.72
CASC4-208ENST00000559151 RPL19P84098 196 aaKnown RBP4.33□□□□□ -1.72
CASC4-208ENST00000559151 RELAQ04206 551 aa4.33□□□□□ -1.72
CASC4-208ENST00000559151 KRR1Q13601 381 aaKnown RBP4.33□□□□□ -1.72
CASC4-208ENST00000559151 TMED4Q7Z7H5 227 aa4.33□□□□□ -1.72
CASC4-208ENST00000559151 DHFR2Q86XF0 187 aa4.33□□□□□ -1.72
CASC4-208ENST00000559151 C20orf196Q8IYI0 205 aa4.33□□□□□ -1.72
CASC4-208ENST00000559151 DYNAPQ8N1N2 210 aa4.33□□□□□ -1.72
CASC4-208ENST00000559151 RPP25LQ8N5L8 163 aaKnown RBP4.33□□□□□ -1.72
CASC4-208ENST00000559151 OR8B12Q8NGG6 310 aa4.33□□□□□ -1.72
CASC4-208ENST00000559151 TCEAL4Q96EI5 215 aa4.33□□□□□ -1.72
CASC4-208ENST00000559151 DDA1Q9BW61 102 aa4.33□□□□□ -1.72
CASC4-208ENST00000559151 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.33□□□□□ -1.72
CASC4-208ENST00000559151 SMPXQ9UHP9 88 aa4.33□□□□□ -1.72
CASC4-208ENST00000559151 CFAP47Q6ZTR5 3102 aa4.33□□□□□ -1.72
CASC4-208ENST00000559151 REV3LO60673 3130 aa4.32□□□□□ -1.72
CASC4-208ENST00000559151 XIRP2A4UGR9 3374 aa4.32□□□□□ -1.72
CASC4-208ENST00000559151 IFNA21P01568 189 aa4.32□□□□□ -1.72
CASC4-208ENST00000559151 APOC1P02654 83 aa4.32□□□□□ -1.72
CASC4-208ENST00000559151 EVX1P49640 407 aa4.32□□□□□ -1.72
CASC4-208ENST00000559151 PSPHP78330 225 aa4.32□□□□□ -1.72
CASC4-208ENST00000559151 C9orf64Q5T6V5 341 aa4.32□□□□□ -1.72
CASC4-208ENST00000559151 Q6ZS49 121 aa4.32□□□□□ -1.72
CASC4-208ENST00000559151 PHF13Q86YI8 300 aaPredicted RBP4.32□□□□□ -1.72
CASC4-208ENST00000559151 DOHHQ9BU89 302 aa4.32□□□□□ -1.72
CASC4-208ENST00000559151 M0QZK8 103 aa4.31□□□□□ -1.72
CASC4-208ENST00000559151 HLA-DRB1P01911 266 aa4.31□□□□□ -1.72
CASC4-208ENST00000559151 PRM2P04554 102 aa4.31□□□□□ -1.72
CASC4-208ENST00000559151 CRHP06850 196 aa4.31□□□□□ -1.72
CASC4-208ENST00000559151 NBEAP1P0C6P0 100 aa4.31□□□□□ -1.72
CASC4-208ENST00000559151 TFAMQ00059 246 aaKnown RBP4.31□□□□□ -1.72
CASC4-208ENST00000559151 RPL18Q07020 188 aaKnown RBP4.31□□□□□ -1.72
CASC4-208ENST00000559151 KCNJ8Q15842 424 aa4.31□□□□□ -1.72
CASC4-208ENST00000559151 DCUN1D1Q96GG9 259 aa4.31□□□□□ -1.72
CASC4-208ENST00000559151 FAM32AQ9Y421 112 aaKnown RBP4.31□□□□□ -1.72
CASC4-208ENST00000559151 AMMECR1Q9Y4X0 333 aaPredicted RBP4.31□□□□□ -1.72
CASC4-208ENST00000559151 RIC1Q4ADV7 1423 aa4.3□□□□□ -1.72
CASC4-208ENST00000559151 NUP98P52948 1817 aa4.3□□□□□ -1.72
CASC4-208ENST00000559151 CHD7Q9P2D1 2997 aa4.3□□□□□ -1.72
CASC4-208ENST00000559151 FBN1P35555 2871 aaKnown RBP4.3□□□□□ -1.72
CASC4-208ENST00000559151 DDX60LQ5H9U9 1706 aaKnown RBP4.3□□□□□ -1.72
CASC4-208ENST00000559151 MSMBP08118 114 aa4.3□□□□□ -1.72
CASC4-208ENST00000559151 IDO2Q6ZQW0 420 aa4.3□□□□□ -1.72
CASC4-208ENST00000559151 LRRC25Q8N386 305 aaPredicted RBP4.3□□□□□ -1.72
CASC4-208ENST00000559151 PHB2Q99623 299 aa4.3□□□□□ -1.72
CASC4-208ENST00000559151 CHST6Q9GZX3 395 aa4.3□□□□□ -1.72
CASC4-208ENST00000559151 TLNRD1Q9H1K6 362 aa4.3□□□□□ -1.72
CASC4-208ENST00000559151 TRIOO75962 3097 aa4.3□□□□□ -1.72
CASC4-208ENST00000559151 RALGAPA2Q2PPJ7 1873 aa4.3□□□□□ -1.72
CASC4-208ENST00000559151 TRANK1O15050 2925 aa4.29□□□□□ -1.72
CASC4-208ENST00000559151 CHD9Q3L8U1 2897 aa4.29□□□□□ -1.72
CASC4-208ENST00000559151 MGAMO43451 1857 aa4.29□□□□□ -1.72
CASC4-208ENST00000559151 A0A0D9SEW6 157 aa4.29□□□□□ -1.72
CASC4-208ENST00000559151 CNIH1O95406 144 aa4.29□□□□□ -1.72
CASC4-208ENST00000559151 SULT1A3P0DMM9 295 aa4.29□□□□□ -1.72
CASC4-208ENST00000559151 SULT1A4P0DMN0 295 aa4.29□□□□□ -1.72
CASC4-208ENST00000559151 RPL5P46777 297 aaKnown RBP4.29□□□□□ -1.72
CASC4-208ENST00000559151 SNRPD2P62316 118 aaKnown RBP4.29□□□□□ -1.72
CASC4-208ENST00000559151 HIST1H4AP62805 103 aaKnown RBP4.29□□□□□ -1.72
CASC4-208ENST00000559151 CCL20P78556 96 aa4.29□□□□□ -1.72
CASC4-208ENST00000559151 POU6F1Q14863 301 aa4.29□□□□□ -1.72
CASC4-208ENST00000559151 C3orf62Q6ZUJ4 267 aa4.29□□□□□ -1.72
CASC4-208ENST00000559151 ZNF625Q96I27 306 aaPredicted RBP4.29□□□□□ -1.72
CASC4-208ENST00000559151 MRPL27Q9P0M9 148 aaKnown RBP4.29□□□□□ -1.72
CASC4-208ENST00000559151 LRRC37A2A6NM11 1700 aa4.29□□□□□ -1.72
CASC4-208ENST00000559151 LRRC37AA6NMS7 1700 aa4.29□□□□□ -1.72
CASC4-208ENST00000559151 PLXNA1Q9UIW2 1896 aa4.28□□□□□ -1.72
CASC4-208ENST00000559151 PSME4Q14997 1843 aa4.28□□□□□ -1.72
CASC4-208ENST00000559151 CHD6Q8TD26 2715 aa4.28□□□□□ -1.72
CASC4-208ENST00000559151 HMSDA8MTL9 139 aa4.28□□□□□ -1.72
CASC4-208ENST00000559151 LINC00587B1AMM8 73 aa4.28□□□□□ -1.72
CASC4-208ENST00000559151 ATP6V1G2-DDX39BF2Z307 99 aa4.28□□□□□ -1.72
CASC4-208ENST00000559151 FAAHO00519 579 aa4.28□□□□□ -1.72
CASC4-208ENST00000559151 ARPC5O15511 151 aa4.28□□□□□ -1.72
CASC4-208ENST00000559151 CST8O60676 142 aa4.28□□□□□ -1.72
CASC4-208ENST00000559151 IGHV3-7P01780 117 aa4.28□□□□□ -1.72
CASC4-208ENST00000559151 CRYBA4P53673 196 aa4.28□□□□□ -1.72
CASC4-208ENST00000559151 AQP4P55087 323 aa4.28□□□□□ -1.72
CASC4-208ENST00000559151 TMEM155Q4W5P6 130 aa4.28□□□□□ -1.72
CASC4-208ENST00000559151 DHRS4L2Q6PKH6 230 aa4.28□□□□□ -1.72
CASC4-208ENST00000559151 OR6V1Q8N148 313 aa4.28□□□□□ -1.72
CASC4-208ENST00000559151 OR10X1Q8NGY0 326 aa4.28□□□□□ -1.72
CASC4-208ENST00000559151 AIF1LQ9BQI0 150 aa4.28□□□□□ -1.72
CASC4-208ENST00000559151 EPG5Q9HCE0 2579 aa4.28□□□□□ -1.72
CASC4-208ENST00000559151 KIAA2026Q5HYC2 2103 aa4.28□□□□□ -1.72
CASC4-208ENST00000559151 DUOX1Q9NRD9 1551 aa4.27□□□□□ -1.73
CASC4-208ENST00000559151 ANKRD36CQ5JPF3 1778 aa4.27□□□□□ -1.73
CASC4-208ENST00000559151 DDX60Q8IY21 1712 aaKnown RBP4.27□□□□□ -1.73
CASC4-208ENST00000559151 F8W036 122 aa4.27□□□□□ -1.73
CASC4-208ENST00000559151 SRP9P49458 86 aaKnown RBP4.27□□□□□ -1.73
CASC4-208ENST00000559151 STX19Q8N4C7 294 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms