RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 CA10Q9NS85 328 aa1.68□□□□□ -2.14
SPG11-206ENST00000558093 TAS2R8Q9NYW2 309 aa1.68□□□□□ -2.14
SPG11-206ENST00000558093 ZNF492Q9P255 531 aa1.68□□□□□ -2.14
SPG11-206ENST00000558093 ZNF443Q9Y2A4 671 aaPredicted RBP1.68□□□□□ -2.14
SPG11-206ENST00000558093 PTPRBP23467 1997 aa1.68□□□□□ -2.14
SPG11-206ENST00000558093 SCN9AQ15858 1988 aa1.68□□□□□ -2.14
SPG11-206ENST00000558093 KTN1Q86UP2 1357 aaKnown RBP1.68□□□□□ -2.14
SPG11-206ENST00000558093 TNKS1BP1Q9C0C2 1729 aaKnown RBP1.68□□□□□ -2.14
SPG11-206ENST00000558093 CAMSAP2Q08AD1 1489 aa1.68□□□□□ -2.14
SPG11-206ENST00000558093 NEO1Q92859 1461 aa1.68□□□□□ -2.14
SPG11-206ENST00000558093 TUBGCP6Q96RT7 1819 aa1.68□□□□□ -2.14
SPG11-206ENST00000558093 KDM5CP41229 1560 aa1.68□□□□□ -2.14
SPG11-206ENST00000558093 FRMPD1Q5SYB0 1578 aa1.68□□□□□ -2.14
SPG11-206ENST00000558093 NRKQ7Z2Y5 1582 aa1.68□□□□□ -2.14
SPG11-206ENST00000558093 DSPPQ9NZW4 1301 aa1.67□□□□□ -2.14
SPG11-206ENST00000558093 CLIP1P30622 1438 aa1.67□□□□□ -2.14
SPG11-206ENST00000558093 TRAV19A0A0A6YYK7 116 aa1.67□□□□□ -2.14
SPG11-206ENST00000558093 ZNF860A6NHJ4 632 aa1.67□□□□□ -2.14
SPG11-206ENST00000558093 IGLL5B9A064 214 aa1.67□□□□□ -2.14
SPG11-206ENST00000558093 M0R378 163 aa1.67□□□□□ -2.14
SPG11-206ENST00000558093 PLA2G10O15496 165 aa1.67□□□□□ -2.14
SPG11-206ENST00000558093 SLC37A4O43826 429 aa1.67□□□□□ -2.14
SPG11-206ENST00000558093 KLF7O75840 302 aaPredicted RBP1.67□□□□□ -2.14
SPG11-206ENST00000558093 IGLV3-27P01718 113 aa1.67□□□□□ -2.14
SPG11-206ENST00000558093 TCRAP04437 139 aa1.67□□□□□ -2.14
SPG11-206ENST00000558093 IL7P13232 177 aa1.67□□□□□ -2.14
SPG11-206ENST00000558093 LGALS3P17931 250 aaKnown RBP1.67□□□□□ -2.14
SPG11-206ENST00000558093 CRYBB3P26998 211 aa1.67□□□□□ -2.14
SPG11-206ENST00000558093 PSMB8P28062 276 aa1.67□□□□□ -2.14
SPG11-206ENST00000558093 RPL22P35268 128 aaKnown RBP1.67□□□□□ -2.14
SPG11-206ENST00000558093 TGFBR1P36897 503 aa1.67□□□□□ -2.14
SPG11-206ENST00000558093 ZNF83P51522 516 aa1.67□□□□□ -2.14
SPG11-206ENST00000558093 AKR1C2P52895 323 aa1.67□□□□□ -2.14
SPG11-206ENST00000558093 AQP4P55087 323 aa1.67□□□□□ -2.14
SPG11-206ENST00000558093 CLLU1Q5K131 121 aa1.67□□□□□ -2.14
SPG11-206ENST00000558093 C6orf52Q5T4I8 152 aa1.67□□□□□ -2.14
SPG11-206ENST00000558093 KRTAP5-7Q6L8G8 165 aa1.67□□□□□ -2.14
SPG11-206ENST00000558093 CEMP1Q6PRD7 247 aaPredicted RBP1.67□□□□□ -2.14
SPG11-206ENST00000558093 ZNF705AQ6ZN79 300 aaPredicted RBP1.67□□□□□ -2.14
SPG11-206ENST00000558093 PDPNQ86YL7 162 aa1.67□□□□□ -2.14
SPG11-206ENST00000558093 GPHB5Q86YW7 130 aa1.67□□□□□ -2.14
SPG11-206ENST00000558093 MSRB3Q8IXL7 192 aa1.67□□□□□ -2.14
SPG11-206ENST00000558093 TTC9CQ8N5M4 171 aa1.67□□□□□ -2.14
SPG11-206ENST00000558093 STAG3L4Q8TBR4 150 aa1.67□□□□□ -2.14
SPG11-206ENST00000558093 FAM57AQ8TBR7 257 aa1.67□□□□□ -2.14
SPG11-206ENST00000558093 RPS4Y2Q8TD47 263 aa1.67□□□□□ -2.14
SPG11-206ENST00000558093 H1FXQ92522 213 aaKnown RBP1.67□□□□□ -2.14
SPG11-206ENST00000558093 MS4A6EQ96DS6 147 aa1.67□□□□□ -2.14
SPG11-206ENST00000558093 DPH3Q96FX2 82 aa1.67□□□□□ -2.14
SPG11-206ENST00000558093 C2orf50Q96LR7 162 aa1.67□□□□□ -2.14
SPG11-206ENST00000558093 TIMM17AQ99595 171 aa1.67□□□□□ -2.14
SPG11-206ENST00000558093 SND1-IT1Q9HBX3 110 aa1.67□□□□□ -2.14
SPG11-206ENST00000558093 MED9Q9NWA0 146 aa1.67□□□□□ -2.14
SPG11-206ENST00000558093 ZNF586Q9NXT0 402 aa1.67□□□□□ -2.14
SPG11-206ENST00000558093 FKBP11Q9NYL4 201 aa1.67□□□□□ -2.14
SPG11-206ENST00000558093 AK3Q9UIJ7 227 aa1.67□□□□□ -2.14
SPG11-206ENST00000558093 MRPS16Q9Y3D3 137 aaKnown RBP1.67□□□□□ -2.14
SPG11-206ENST00000558093 IER3IP1Q9Y5U9 82 aa1.67□□□□□ -2.14
SPG11-206ENST00000558093 NUP98P52948 1817 aa1.67□□□□□ -2.14
SPG11-206ENST00000558093 SBF2Q86WG5 1849 aa1.67□□□□□ -2.14
SPG11-206ENST00000558093 A2ML1A8K2U0 1454 aa1.67□□□□□ -2.14
SPG11-206ENST00000558093 PLXNB1O43157 2135 aa1.67□□□□□ -2.14
SPG11-206ENST00000558093 CEP170Q5SW79 1584 aa1.67□□□□□ -2.14
SPG11-206ENST00000558093 KIF21AQ7Z4S6 1674 aa1.67□□□□□ -2.14
SPG11-206ENST00000558093 LTN1O94822 1766 aa1.67□□□□□ -2.14
SPG11-206ENST00000558093 RGPD4Q7Z3J3 1758 aa1.67□□□□□ -2.14
SPG11-206ENST00000558093 ANK1P16157 1881 aa1.67□□□□□ -2.14
SPG11-206ENST00000558093 SDK2Q58EX2 2172 aa1.66□□□□□ -2.14
SPG11-206ENST00000558093 ADAMTS13Q76LX8 1427 aa1.66□□□□□ -2.14
SPG11-206ENST00000558093 NSD3Q9BZ95 1437 aa1.66□□□□□ -2.14
SPG11-206ENST00000558093 ARAP3Q8WWN8 1544 aa1.66□□□□□ -2.14
SPG11-206ENST00000558093 TOPBP1Q92547 1522 aa1.66□□□□□ -2.14
SPG11-206ENST00000558093 BRWD3Q6RI45 1802 aa1.66□□□□□ -2.14
SPG11-206ENST00000558093 SCN1AP35498 2009 aa1.66□□□□□ -2.14
SPG11-206ENST00000558093 SVILO95425 2214 aa1.66□□□□□ -2.14
SPG11-206ENST00000558093 IGLV1-50A0A075B6I6 118 aa1.66□□□□□ -2.14
SPG11-206ENST00000558093 TRAV27A0A087WT01 109 aa1.66□□□□□ -2.14
SPG11-206ENST00000558093 IGKV3D-11A0A0A0MRZ8 115 aa1.66□□□□□ -2.14
SPG11-206ENST00000558093 IGHV1-45A0A0A0MS14 117 aa1.66□□□□□ -2.14
SPG11-206ENST00000558093 TRAV13-1A0A0B4J241 112 aa1.66□□□□□ -2.14
SPG11-206ENST00000558093 IGHV1-58A0A0C4DH39 117 aa1.66□□□□□ -2.14
SPG11-206ENST00000558093 TRBV7-6A0A0J9YX20 115 aa1.66□□□□□ -2.14
SPG11-206ENST00000558093 A0A1W2PRS3 328 aa1.66□□□□□ -2.14
SPG11-206ENST00000558093 IRGMA1A4Y4 181 aa1.66□□□□□ -2.14
SPG11-206ENST00000558093 ZNF727A8MUV8 499 aa1.66□□□□□ -2.14
SPG11-206ENST00000558093 H3BMG7 143 aa1.66□□□□□ -2.14
SPG11-206ENST00000558093 TMEM256-PLSCR3K7ERE1 68 aa1.66□□□□□ -2.14
SPG11-206ENST00000558093 K7ERJ3 54 aa1.66□□□□□ -2.14
SPG11-206ENST00000558093 CST7O76096 145 aa1.66□□□□□ -2.14
SPG11-206ENST00000558093 KRASP01116 189 aa1.66□□□□□ -2.14
SPG11-206ENST00000558093 LTAP01374 205 aa1.66□□□□□ -2.14
SPG11-206ENST00000558093 TNFP01375 233 aa1.66□□□□□ -2.14
SPG11-206ENST00000558093 IGKV1-5P01602 117 aa1.66□□□□□ -2.14
SPG11-206ENST00000558093 SRP19P09132 144 aaKnown RBP1.66□□□□□ -2.14
SPG11-206ENST00000558093 SEC11BP0C7V7 166 aa1.66□□□□□ -2.14
SPG11-206ENST00000558093 TRAPPC2P0DI81 140 aa1.66□□□□□ -2.14
SPG11-206ENST00000558093 TRAPPC2BP0DI82 140 aa1.66□□□□□ -2.14
SPG11-206ENST00000558093 IFITM1P13164 125 aa1.66□□□□□ -2.14
SPG11-206ENST00000558093 CRYGSP22914 178 aa1.66□□□□□ -2.14
SPG11-206ENST00000558093 ARPP19P56211 112 aa1.66□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 146.1 ms