RNA–Protein interactions for RNA: ENST00000556975.5

TMEM260-214, Transcript of transmembrane protein 260, humanhuman

TSL 4

Gene TMEM260, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-214ENST00000556975 SOCS3O14543 225 aa16.43■□□□□ 0.22
TMEM260-214ENST00000556975 RBMY1A1P0DJD3 496 aaKnown RBP16.43■□□□□ 0.22
TMEM260-214ENST00000556975 RBMY1CP0DJD4 496 aa16.43■□□□□ 0.22
TMEM260-214ENST00000556975 ID1P41134 155 aa16.43■□□□□ 0.22
TMEM260-214ENST00000556975 RBMY1FQ15415 496 aaKnown RBP16.43■□□□□ 0.22
TMEM260-214ENST00000556975 C4orf46Q504U0 113 aa16.43■□□□□ 0.22
TMEM260-214ENST00000556975 TMEM144Q7Z5S9 345 aa16.43■□□□□ 0.22
TMEM260-214ENST00000556975 OR8I2Q8N0Y5 310 aa16.43■□□□□ 0.22
TMEM260-214ENST00000556975 SMIM8Q96KF7 97 aa16.43■□□□□ 0.22
TMEM260-214ENST00000556975 IGHV4-28A0A0C4DH34 117 aa16.42■□□□□ 0.22
TMEM260-214ENST00000556975 PMS2P5A8MQ11 134 aa16.42■□□□□ 0.22
TMEM260-214ENST00000556975 PLA2G10O15496 165 aa16.42■□□□□ 0.22
TMEM260-214ENST00000556975 PSMB3P49720 205 aa16.42■□□□□ 0.22
TMEM260-214ENST00000556975 BPIFCQ8NFQ6 507 aa16.42■□□□□ 0.22
TMEM260-214ENST00000556975 MITD1Q8WV92 249 aa16.42■□□□□ 0.22
TMEM260-214ENST00000556975 PPP1R14BQ96C90 147 aa16.42■□□□□ 0.22
TMEM260-214ENST00000556975 CLEC5AQ9NY25 188 aa16.42■□□□□ 0.22
TMEM260-214ENST00000556975 PSENENQ9NZ42 101 aa16.42■□□□□ 0.22
TMEM260-214ENST00000556975 TBC1D24Q9ULP9 559 aa16.42■□□□□ 0.22
TMEM260-214ENST00000556975 SAMD13Q5VXD3 122 aa16.41■□□□□ 0.22
TMEM260-214ENST00000556975 TMEM182Q6ZP80 229 aaPredicted RBP16.41■□□□□ 0.22
TMEM260-214ENST00000556975 ACOT7LQ6ZUV0 252 aa16.41■□□□□ 0.22
TMEM260-214ENST00000556975 CLUHP3Q96NS8 147 aa16.41■□□□□ 0.22
TMEM260-214ENST00000556975 ISLRO14498 428 aa16.4■□□□□ 0.22
TMEM260-214ENST00000556975 PAX9P55771 341 aa16.4■□□□□ 0.22
TMEM260-214ENST00000556975 AKR1C1Q04828 323 aa16.4■□□□□ 0.22
TMEM260-214ENST00000556975 FOXI2Q6ZQN5 318 aa16.4■□□□□ 0.22
TMEM260-214ENST00000556975 SAV1Q9H4B6 383 aaPredicted RBP16.4■□□□□ 0.22
TMEM260-214ENST00000556975 ZNF98A6NK75 572 aa16.39■□□□□ 0.21
TMEM260-214ENST00000556975 GATA2P23769 480 aaPredicted RBP16.39■□□□□ 0.21
TMEM260-214ENST00000556975 S100A7P31151 101 aa16.39■□□□□ 0.21
TMEM260-214ENST00000556975 MEOX2P50222 304 aa16.39■□□□□ 0.21
TMEM260-214ENST00000556975 IAH1Q2TAA2 248 aaPredicted RBP16.39■□□□□ 0.21
TMEM260-214ENST00000556975 GDF5OSQ5U4N7 250 aa16.39■□□□□ 0.21
TMEM260-214ENST00000556975 TMEM14EPQ6UXP3 125 aa16.39■□□□□ 0.21
TMEM260-214ENST00000556975 LINC00052Q96N35 136 aa16.39■□□□□ 0.21
TMEM260-214ENST00000556975 XCL2Q9UBD3 114 aa16.39■□□□□ 0.21
TMEM260-214ENST00000556975 C11orf94C9JXX5 98 aa16.38■□□□□ 0.21
TMEM260-214ENST00000556975 LYRM1O43325 122 aa16.38■□□□□ 0.21
TMEM260-214ENST00000556975 SSSCA1O60232 199 aa16.38■□□□□ 0.21
TMEM260-214ENST00000556975 GALR1P47211 349 aa16.38■□□□□ 0.21
TMEM260-214ENST00000556975 TCTAP57738 103 aa16.38■□□□□ 0.21
TMEM260-214ENST00000556975 TAS2R30P59541 319 aa16.38■□□□□ 0.21
TMEM260-214ENST00000556975 SPATA31B1PQ5VZV4 182 aa16.38■□□□□ 0.21
TMEM260-214ENST00000556975 LGALS9CQ6DKI2 356 aa16.38■□□□□ 0.21
TMEM260-214ENST00000556975 ELOA3CA0A087WX78 387 aaPredicted RBP16.37■□□□□ 0.21
TMEM260-214ENST00000556975 FNDC10F2Z333 226 aa16.37■□□□□ 0.21
TMEM260-214ENST00000556975 ORM2P19652 201 aa16.37■□□□□ 0.21
TMEM260-214ENST00000556975 CYP2G1PQ6ZSU1 146 aa16.37■□□□□ 0.21
TMEM260-214ENST00000556975 ZBTB8BQ8NAP8 495 aaPredicted RBP16.37■□□□□ 0.21
TMEM260-214ENST00000556975 C2CD4CQ8TF44 421 aa16.37■□□□□ 0.21
TMEM260-214ENST00000556975 C17orf77Q96MU5 243 aa16.37■□□□□ 0.21
TMEM260-214ENST00000556975 GPR82Q96P67 336 aa16.37■□□□□ 0.21
TMEM260-214ENST00000556975 C20orf85Q9H1P6 137 aa16.37■□□□□ 0.21
TMEM260-214ENST00000556975 SLC25A32Q9H2D1 315 aa16.37■□□□□ 0.21
TMEM260-214ENST00000556975 KMT2AQ03164 3969 aa16.37■□□□□ 0.21
TMEM260-214ENST00000556975 TSC22D2O75157 780 aa16.36■□□□□ 0.21
TMEM260-214ENST00000556975 DEFB1P60022 68 aa16.36■□□□□ 0.21
TMEM260-214ENST00000556975 PLP1P60201 277 aa16.36■□□□□ 0.21
TMEM260-214ENST00000556975 DLK1P80370 383 aa16.36■□□□□ 0.21
TMEM260-214ENST00000556975 OR1B1Q8NGR6 318 aa16.36■□□□□ 0.21
TMEM260-214ENST00000556975 TMEM147Q9BVK8 224 aa16.36■□□□□ 0.21
TMEM260-214ENST00000556975 TCRBP04435 133 aa16.35■□□□□ 0.21
TMEM260-214ENST00000556975 IL5P05113 134 aa16.35■□□□□ 0.21
TMEM260-214ENST00000556975 SELENOTP62341 195 aa16.35■□□□□ 0.21
TMEM260-214ENST00000556975 ZNF705AQ6ZN79 300 aaPredicted RBP16.35■□□□□ 0.21
TMEM260-214ENST00000556975 NEU1Q99519 415 aa16.35■□□□□ 0.21
TMEM260-214ENST00000556975 RSG1Q9BU20 258 aa16.35■□□□□ 0.21
TMEM260-214ENST00000556975 SLC25A22Q9H936 323 aa16.35■□□□□ 0.21
TMEM260-214ENST00000556975 NPVFQ9HCQ7 196 aa16.35■□□□□ 0.21
TMEM260-214ENST00000556975 SMCO3A2RU48 225 aa16.34■□□□□ 0.21
TMEM260-214ENST00000556975 CCNKO75909 580 aa16.34■□□□□ 0.21
TMEM260-214ENST00000556975 METTL15P1P0C7V9 234 aa16.34■□□□□ 0.21
TMEM260-214ENST00000556975 HLA-DMBP28068 263 aa16.34■□□□□ 0.21
TMEM260-214ENST00000556975 LINC00299Q6ZSB3 139 aa16.34■□□□□ 0.21
TMEM260-214ENST00000556975 OR10P1Q8NGE3 313 aa16.34■□□□□ 0.21
TMEM260-214ENST00000556975 C16orf92Q96LL3 132 aa16.34■□□□□ 0.21
TMEM260-214ENST00000556975 RPRMQ9NS64 109 aa16.34■□□□□ 0.21
TMEM260-214ENST00000556975 GSKIPQ9P0R6 139 aa16.34■□□□□ 0.21
TMEM260-214ENST00000556975 RCL1Q9Y2P8 373 aaKnown RBP16.34■□□□□ 0.21
TMEM260-214ENST00000556975 A0A0J9YX75 114 aa16.33■□□□□ 0.2
TMEM260-214ENST00000556975 K7EPK0 472 aa16.33■□□□□ 0.2
TMEM260-214ENST00000556975 SCGB1D2O95969 90 aa16.33■□□□□ 0.2
TMEM260-214ENST00000556975 EBLN2Q6P2I7 272 aa16.33■□□□□ 0.2
TMEM260-214ENST00000556975 GSG1LQ6UXU4 331 aa16.33■□□□□ 0.2
TMEM260-214ENST00000556975 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.33■□□□□ 0.2
TMEM260-214ENST00000556975 ZNF709Q8N972 641 aa16.33■□□□□ 0.2
TMEM260-214ENST00000556975 CCDC32Q9BV29 185 aa16.33■□□□□ 0.2
TMEM260-214ENST00000556975 SLC25A39Q9BZJ4 359 aaPredicted RBP16.33■□□□□ 0.2
TMEM260-214ENST00000556975 SMIM9A6NGZ8 99 aa16.32■□□□□ 0.2
TMEM260-214ENST00000556975 ZNF705FA8MVS1 300 aaPredicted RBP16.32■□□□□ 0.2
TMEM260-214ENST00000556975 H3BRN7 92 aa16.32■□□□□ 0.2
TMEM260-214ENST00000556975 IGKV3-20P01619 116 aa16.32■□□□□ 0.2
TMEM260-214ENST00000556975 MBPP02686 304 aaPredicted RBP16.32■□□□□ 0.2
TMEM260-214ENST00000556975 ZNF705DP0CH99 300 aaPredicted RBP16.32■□□□□ 0.2
TMEM260-214ENST00000556975 ZNF705BP0CI00 300 aaPredicted RBP16.32■□□□□ 0.2
TMEM260-214ENST00000556975 OR4B1Q8NGF8 309 aa16.32■□□□□ 0.2
TMEM260-214ENST00000556975 C20orf173Q96LM9 149 aa16.32■□□□□ 0.2
TMEM260-214ENST00000556975 SHANK2-AS3Q9BTD1 123 aa16.32■□□□□ 0.2
TMEM260-214ENST00000556975 C7orf66A4D0T2 115 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms