RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 HCFC1P51610 2035 aa3.98□□□□□ -1.77
SRP54-211ENST00000556445 VCANP13611 3396 aa3.98□□□□□ -1.77
SRP54-211ENST00000556445 YLPM1P49750 1951 aaKnown RBP3.98□□□□□ -1.77
SRP54-211ENST00000556445 USP34Q70CQ2 3546 aa3.98□□□□□ -1.77
SRP54-211ENST00000556445 DIDO1Q9BTC0 2240 aaKnown RBP3.97□□□□□ -1.77
SRP54-211ENST00000556445 ANKRD11Q6UB99 2663 aaPredicted RBP3.97□□□□□ -1.77
SRP54-211ENST00000556445 IGHV4OR15-8A0A075B7B6 117 aa3.97□□□□□ -1.77
SRP54-211ENST00000556445 LOC100131303A0A0U1RQF7 123 aa3.97□□□□□ -1.77
SRP54-211ENST00000556445 A0A1B0GW64 132 aa3.97□□□□□ -1.77
SRP54-211ENST00000556445 TMEM218A2RU14 115 aa3.97□□□□□ -1.77
SRP54-211ENST00000556445 C15orf61A6NNL5 157 aa3.97□□□□□ -1.77
SRP54-211ENST00000556445 FNDC10F2Z333 226 aa3.97□□□□□ -1.77
SRP54-211ENST00000556445 K7EMT4 169 aa3.97□□□□□ -1.77
SRP54-211ENST00000556445 CRYZL1O95825 349 aa3.97□□□□□ -1.77
SRP54-211ENST00000556445 IFNA10P01566 189 aa3.97□□□□□ -1.77
SRP54-211ENST00000556445 METTL15P1P0C7V9 234 aa3.97□□□□□ -1.77
SRP54-211ENST00000556445 SAA2P0DJI9 122 aaPredicted RBP3.97□□□□□ -1.77
SRP54-211ENST00000556445 LGALS7P47929 136 aa3.97□□□□□ -1.77
SRP54-211ENST00000556445 ZNF137PP52743 207 aa3.97□□□□□ -1.77
SRP54-211ENST00000556445 DVL1P1P54792 670 aaPredicted RBP3.97□□□□□ -1.77
SRP54-211ENST00000556445 HSPE1P61604 102 aaKnown RBP3.97□□□□□ -1.77
SRP54-211ENST00000556445 CD164Q04900 197 aa3.97□□□□□ -1.77
SRP54-211ENST00000556445 ZNF616Q08AN1 781 aa3.97□□□□□ -1.77
SRP54-211ENST00000556445 LRRC75BQ2VPJ9 315 aa3.97□□□□□ -1.77
SRP54-211ENST00000556445 RPL39P5Q59GN2 51 aa3.97□□□□□ -1.77
SRP54-211ENST00000556445 OR2B11Q5JQS5 317 aa3.97□□□□□ -1.77
SRP54-211ENST00000556445 RBMS3Q6XE24 437 aaKnown RBP3.97□□□□□ -1.77
SRP54-211ENST00000556445 ZNF833PQ6ZTB9 187 aa3.97□□□□□ -1.77
SRP54-211ENST00000556445 TCF23Q7RTU1 214 aa3.97□□□□□ -1.77
SRP54-211ENST00000556445 PDPNQ86YL7 162 aa3.97□□□□□ -1.77
SRP54-211ENST00000556445 ZCCHC24Q8N2G6 241 aaKnown RBP3.97□□□□□ -1.77
SRP54-211ENST00000556445 SVBPQ8N300 66 aa3.97□□□□□ -1.77
SRP54-211ENST00000556445 OR4C13Q8NGP0 309 aa3.97□□□□□ -1.77
SRP54-211ENST00000556445 OR13D1Q8NGV5 346 aa3.97□□□□□ -1.77
SRP54-211ENST00000556445 SEC11CQ9BY50 192 aa3.97□□□□□ -1.77
SRP54-211ENST00000556445 UQCC1Q9NVA1 299 aa3.97□□□□□ -1.77
SRP54-211ENST00000556445 BET1LQ9NYM9 111 aa3.97□□□□□ -1.77
SRP54-211ENST00000556445 GOLT1BQ9Y3E0 138 aa3.97□□□□□ -1.77
SRP54-211ENST00000556445 DOCK11Q5JSL3 2073 aa3.97□□□□□ -1.77
SRP54-211ENST00000556445 TLN1Q9Y490 2541 aaKnown RBP3.96□□□□□ -1.77
SRP54-211ENST00000556445 VPS13AQ96RL7 3174 aa3.96□□□□□ -1.77
SRP54-211ENST00000556445 TRAV1-1A0A0B4J248 108 aa3.96□□□□□ -1.78
SRP54-211ENST00000556445 A0A1B0GWB2 263 aa3.96□□□□□ -1.78
SRP54-211ENST00000556445 F8W036 122 aa3.96□□□□□ -1.78
SRP54-211ENST00000556445 INS-IGF2F8WCM5 200 aa3.96□□□□□ -1.78
SRP54-211ENST00000556445 M0R1W7 72 aa3.96□□□□□ -1.78
SRP54-211ENST00000556445 UPK2O00526 184 aa3.96□□□□□ -1.78
SRP54-211ENST00000556445 SLC31A2O15432 143 aa3.96□□□□□ -1.78
SRP54-211ENST00000556445 CRXO43186 299 aaPredicted RBP3.96□□□□□ -1.78
SRP54-211ENST00000556445 KBTBD11O94819 623 aa3.96□□□□□ -1.78
SRP54-211ENST00000556445 TSHBP01222 138 aa3.96□□□□□ -1.78
SRP54-211ENST00000556445 IFNA1P01562 189 aa3.96□□□□□ -1.78
SRP54-211ENST00000556445 APOC3P02656 99 aa3.96□□□□□ -1.78
SRP54-211ENST00000556445 OR9G9P0C7N8 305 aa3.96□□□□□ -1.78
SRP54-211ENST00000556445 IGHV1-8P0DP01 117 aa3.96□□□□□ -1.78
SRP54-211ENST00000556445 USF1P22415 310 aaPredicted RBP3.96□□□□□ -1.78
SRP54-211ENST00000556445 SNCAP37840 140 aa3.96□□□□□ -1.78
SRP54-211ENST00000556445 HOXA1P49639 335 aaPredicted RBP3.96□□□□□ -1.78
SRP54-211ENST00000556445 SUB1P53999 127 aaKnown RBP eCLIP3.96□□□□□ -1.78
SRP54-211ENST00000556445 DLX6P56179 175 aa3.96□□□□□ -1.78
SRP54-211ENST00000556445 TMEM267Q0VDI3 215 aaPredicted RBP3.96□□□□□ -1.78
SRP54-211ENST00000556445 KIAA0141Q14154 515 aaPredicted RBP3.96□□□□□ -1.78
SRP54-211ENST00000556445 ZNF726P1Q15940 193 aa3.96□□□□□ -1.78
SRP54-211ENST00000556445 ACOT6Q3I5F7 207 aaPredicted RBP3.96□□□□□ -1.78
SRP54-211ENST00000556445 VMA21Q3ZAQ7 101 aa3.96□□□□□ -1.78
SRP54-211ENST00000556445 C11orf71Q6IPW1 123 aa3.96□□□□□ -1.78
SRP54-211ENST00000556445 LYPD2Q6UXB3 125 aa3.96□□□□□ -1.78
SRP54-211ENST00000556445 TGIF2LYQ8IUE0 185 aa3.96□□□□□ -1.78
SRP54-211ENST00000556445 OR1L8Q8NGR8 309 aa3.96□□□□□ -1.78
SRP54-211ENST00000556445 OR2T6Q8NHC8 308 aa3.96□□□□□ -1.78
SRP54-211ENST00000556445 FAM213BQ8TBF2 198 aa3.96□□□□□ -1.78
SRP54-211ENST00000556445 ITLN2Q8WWU7 325 aaPredicted RBP3.96□□□□□ -1.78
SRP54-211ENST00000556445 TAF15Q92804 592 aaKnown RBP eCLIP3.96□□□□□ -1.78
SRP54-211ENST00000556445 EEF1AKMT3Q96AZ1 226 aa3.96□□□□□ -1.78
SRP54-211ENST00000556445 LINC00052Q96N35 136 aa3.96□□□□□ -1.78
SRP54-211ENST00000556445 RNF5Q99942 180 aa3.96□□□□□ -1.78
SRP54-211ENST00000556445 CLEC7AQ9BXN2 247 aa3.96□□□□□ -1.78
SRP54-211ENST00000556445 WDR61Q9GZS3 305 aaKnown RBP3.96□□□□□ -1.78
SRP54-211ENST00000556445 TMEM133Q9H2Q1 129 aa3.96□□□□□ -1.78
SRP54-211ENST00000556445 SDF2L1Q9HCN8 221 aa3.96□□□□□ -1.78
SRP54-211ENST00000556445 TMEM14BQ9NUH8 114 aa3.96□□□□□ -1.78
SRP54-211ENST00000556445 CTSZQ9UBR2 303 aa3.96□□□□□ -1.78
SRP54-211ENST00000556445 CARHSP1Q9Y2V2 147 aaKnown RBP3.96□□□□□ -1.78
SRP54-211ENST00000556445 WASHC3Q9Y3C0 194 aa3.96□□□□□ -1.78
SRP54-211ENST00000556445 KLF12Q9Y4X4 402 aa3.96□□□□□ -1.78
SRP54-211ENST00000556445 PIEZO1Q92508 2521 aa3.95□□□□□ -1.78
SRP54-211ENST00000556445 TINCRA0A1B0GVN0 87 aa3.95□□□□□ -1.78
SRP54-211ENST00000556445 OOSP1A8MZH6 123 aa3.95□□□□□ -1.78
SRP54-211ENST00000556445 H0YJW9 148 aa3.95□□□□□ -1.78
SRP54-211ENST00000556445 H3BP45 60 aa3.95□□□□□ -1.78
SRP54-211ENST00000556445 CYB5BO43169 146 aa3.95□□□□□ -1.78
SRP54-211ENST00000556445 MMP23AO75900 390 aa3.95□□□□□ -1.78
SRP54-211ENST00000556445 IGHV3-7P01780 117 aa3.95□□□□□ -1.78
SRP54-211ENST00000556445 IFNA4P05014 189 aa3.95□□□□□ -1.78
SRP54-211ENST00000556445 ARG1P05089 322 aa3.95□□□□□ -1.78
SRP54-211ENST00000556445 CD5P06127 495 aa3.95□□□□□ -1.78
SRP54-211ENST00000556445 CCL3L1P16619 93 aa3.95□□□□□ -1.78
SRP54-211ENST00000556445 COL8A2P25067 703 aa3.95□□□□□ -1.78
SRP54-211ENST00000556445 NPY1RP25929 384 aa3.95□□□□□ -1.78
SRP54-211ENST00000556445 VDAC2P45880 294 aaPredicted RBP3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms