RNA–Protein interactions for RNA: ENST00000554819.5

SCFD1-214, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-214ENST00000554819 RHOBP62745 196 aa0.2□□□□□ -2.38
SCFD1-214ENST00000554819 PTRHD1Q6GMV3 140 aaKnown RBP0.2□□□□□ -2.38
SCFD1-214ENST00000554819 OR8D4Q8NGM9 314 aa0.2□□□□□ -2.38
SCFD1-214ENST00000554819 BORCS7Q96B45 105 aa0.2□□□□□ -2.38
SCFD1-214ENST00000554819 ADAT3Q96EY9 351 aaPredicted RBP0.2□□□□□ -2.38
SCFD1-214ENST00000554819 C8orf76Q96K31 380 aa0.2□□□□□ -2.38
SCFD1-214ENST00000554819 BCL2L10Q9HD36 194 aa0.2□□□□□ -2.38
SCFD1-214ENST00000554819 PLAC8Q9NZF1 115 aa0.2□□□□□ -2.38
SCFD1-214ENST00000554819 ORMDL1Q9P0S3 153 aa0.2□□□□□ -2.38
SCFD1-214ENST00000554819 NOSIPQ9Y314 301 aaKnown RBP0.2□□□□□ -2.38
SCFD1-214ENST00000554819 EP300Q09472 2414 aaPredicted RBP0.2□□□□□ -2.38
SCFD1-214ENST00000554819 NCOA1Q15788 1441 aa0.2□□□□□ -2.38
SCFD1-214ENST00000554819 HERC2O95714 4834 aa0.2□□□□□ -2.38
SCFD1-214ENST00000554819 PLXND1Q9Y4D7 1925 aa0.19□□□□□ -2.38
SCFD1-214ENST00000554819 A0A087WUJ7 227 aa0.19□□□□□ -2.38
SCFD1-214ENST00000554819 IGLV3-32A0A0A0MS00 114 aa0.19□□□□□ -2.38
SCFD1-214ENST00000554819 NIPSNAP2O75323 286 aa0.19□□□□□ -2.38
SCFD1-214ENST00000554819 CNIH1O95406 144 aa0.19□□□□□ -2.38
SCFD1-214ENST00000554819 OMPP47874 163 aa0.19□□□□□ -2.38
SCFD1-214ENST00000554819 RANP62826 216 aaKnown RBP0.19□□□□□ -2.38
SCFD1-214ENST00000554819 SPINK9Q5DT21 86 aa0.19□□□□□ -2.38
SCFD1-214ENST00000554819 C2orf82Q6UX34 121 aa0.19□□□□□ -2.38
SCFD1-214ENST00000554819 GDPD1Q8N9F7 314 aa0.19□□□□□ -2.38
SCFD1-214ENST00000554819 OR11H6Q8NGC7 330 aa0.19□□□□□ -2.38
SCFD1-214ENST00000554819 WFDC5Q8TCV5 224 aa0.19□□□□□ -2.38
SCFD1-214ENST00000554819 CT55Q8WUE5 264 aa0.19□□□□□ -2.38
SCFD1-214ENST00000554819 ARL5BQ96KC2 179 aa0.19□□□□□ -2.38
SCFD1-214ENST00000554819 GPER1Q99527 375 aa0.19□□□□□ -2.38
SCFD1-214ENST00000554819 TMEM133Q9H2Q1 129 aa0.19□□□□□ -2.38
SCFD1-214ENST00000554819 C14orf105Q9NVL8 296 aa0.19□□□□□ -2.38
SCFD1-214ENST00000554819 UBAP1Q9NZ09 502 aa0.19□□□□□ -2.38
SCFD1-214ENST00000554819 TNFSF18Q9UNG2 199 aa0.19□□□□□ -2.38
SCFD1-214ENST00000554819 CHCHD2Q9Y6H1 151 aaPredicted RBP0.19□□□□□ -2.38
SCFD1-214ENST00000554819 ZANQ9Y493 2812 aa0.19□□□□□ -2.38
SCFD1-214ENST00000554819 ACANP16112 2415 aa0.19□□□□□ -2.38
SCFD1-214ENST00000554819 PIK3C2GO75747 1445 aa0.19□□□□□ -2.38
SCFD1-214ENST00000554819 ADCY9O60503 1353 aa0.19□□□□□ -2.38
SCFD1-214ENST00000554819 SYNE1Q8NF91 8797 aaKnown RBP0.18□□□□□ -2.38
SCFD1-214ENST00000554819 CFAP46Q8IYW2 2715 aa0.18□□□□□ -2.38
SCFD1-214ENST00000554819 COL12A1Q99715 3063 aa0.18□□□□□ -2.38
SCFD1-214ENST00000554819 PLB1Q6P1J6 1458 aa0.18□□□□□ -2.38
SCFD1-214ENST00000554819 TCRBV4S1A1TA0A5B7 111 aa0.18□□□□□ -2.38
SCFD1-214ENST00000554819 hADV38S2A0JD32 116 aa0.18□□□□□ -2.38
SCFD1-214ENST00000554819 C1orf196B1AJZ1 125 aa0.18□□□□□ -2.38
SCFD1-214ENST00000554819 KLF7O75840 302 aaPredicted RBP0.18□□□□□ -2.38
SCFD1-214ENST00000554819 SERPINE1P05121 402 aa0.18□□□□□ -2.38
SCFD1-214ENST00000554819 PPIBP23284 216 aaKnown RBP0.18□□□□□ -2.38
SCFD1-214ENST00000554819 HIST1H3AP68431 136 aa0.18□□□□□ -2.38
SCFD1-214ENST00000554819 H3F3AP84243 136 aa0.18□□□□□ -2.38
SCFD1-214ENST00000554819 CIRBPQ14011 172 aaKnown RBP0.18□□□□□ -2.38
SCFD1-214ENST00000554819 EDDM3AQ14507 147 aa0.18□□□□□ -2.38
SCFD1-214ENST00000554819 Q6Q795 121 aa0.18□□□□□ -2.38
SCFD1-214ENST00000554819 TRAPPC5Q8IUR0 188 aa0.18□□□□□ -2.38
SCFD1-214ENST00000554819 OR8J2Q8NGG1 315 aa0.18□□□□□ -2.38
SCFD1-214ENST00000554819 SLAMF6Q96DU3 332 aa0.18□□□□□ -2.38
SCFD1-214ENST00000554819 CCDC42Q96M95 316 aa0.18□□□□□ -2.38
SCFD1-214ENST00000554819 PARVGQ9HBI0 331 aa0.18□□□□□ -2.38
SCFD1-214ENST00000554819 CTNNBIP1Q9NSA3 81 aaPredicted RBP0.18□□□□□ -2.38
SCFD1-214ENST00000554819 IDI2-AS1Q9NZ38 188 aa0.18□□□□□ -2.38
SCFD1-214ENST00000554819 MUC12Q9UKN1 5478 aa0.18□□□□□ -2.38
SCFD1-214ENST00000554819 CELSR3Q9NYQ7 3312 aa0.18□□□□□ -2.38
SCFD1-214ENST00000554819 TGP01266 2768 aa0.17□□□□□ -2.38
SCFD1-214ENST00000554819 KIAA1549Q9HCM3 1950 aa0.17□□□□□ -2.38
SCFD1-214ENST00000554819 RIMBP3CA6NJZ7 1639 aa0.17□□□□□ -2.38
SCFD1-214ENST00000554819 RIMBP3BA6NNM3 1639 aa0.17□□□□□ -2.38
SCFD1-214ENST00000554819 RIMBP3Q9UFD9 1639 aa0.17□□□□□ -2.38
SCFD1-214ENST00000554819 ALPK3Q96L96 1907 aa0.17□□□□□ -2.38
SCFD1-214ENST00000554819 MXRA5Q9NR99 2828 aa0.17□□□□□ -2.38
SCFD1-214ENST00000554819 DNHD1Q96M86 4753 aa0.17□□□□□ -2.38
SCFD1-214ENST00000554819 hCG_1818297A0A087WSY0 165 aa0.17□□□□□ -2.38
SCFD1-214ENST00000554819 SMIM9A6NGZ8 99 aa0.17□□□□□ -2.38
SCFD1-214ENST00000554819 A8MT66 165 aa0.17□□□□□ -2.38
SCFD1-214ENST00000554819 GADD45GO95257 159 aa0.17□□□□□ -2.38
SCFD1-214ENST00000554819 HAND1O96004 215 aa0.17□□□□□ -2.38
SCFD1-214ENST00000554819 TCRBP04435 133 aa0.17□□□□□ -2.38
SCFD1-214ENST00000554819 C8GP07360 202 aa0.17□□□□□ -2.38
SCFD1-214ENST00000554819 RNASE4P34096 147 aaKnown RBP0.17□□□□□ -2.38
SCFD1-214ENST00000554819 LSM6P62312 80 aaKnown RBP0.17□□□□□ -2.38
SCFD1-214ENST00000554819 RGS21Q2M5E4 152 aa0.17□□□□□ -2.38
SCFD1-214ENST00000554819 TMEM97Q5BJF2 176 aa0.17□□□□□ -2.38
SCFD1-214ENST00000554819 KRTAP26-1Q6PEX3 210 aa0.17□□□□□ -2.38
SCFD1-214ENST00000554819 HAGHLQ6PII5 290 aaPredicted RBP0.17□□□□□ -2.38
SCFD1-214ENST00000554819 Q8IYB0 196 aa0.17□□□□□ -2.38
SCFD1-214ENST00000554819 OTUD6BQ8N6M0 293 aa0.17□□□□□ -2.38
SCFD1-214ENST00000554819 SLC30A7Q8NEW0 376 aa0.17□□□□□ -2.38
SCFD1-214ENST00000554819 FAM172AQ8WUF8 416 aa0.17□□□□□ -2.38
SCFD1-214ENST00000554819 TP53RKQ96S44 253 aa0.17□□□□□ -2.38
SCFD1-214ENST00000554819 LINC00467Q9BRT7 94 aa0.17□□□□□ -2.38
SCFD1-214ENST00000554819 TRIM4Q9C037 500 aa0.17□□□□□ -2.38
SCFD1-214ENST00000554819 CEP295Q9C0D2 2601 aa0.17□□□□□ -2.38
SCFD1-214ENST00000554819 RNASE7Q9H1E1 156 aaKnown RBP0.17□□□□□ -2.38
SCFD1-214ENST00000554819 TAS2R7Q9NYW3 318 aa0.17□□□□□ -2.38
SCFD1-214ENST00000554819 TVP23BQ9NYZ1 205 aa0.17□□□□□ -2.38
SCFD1-214ENST00000554819 DSPP15924 2871 aaKnown RBP0.17□□□□□ -2.38
SCFD1-214ENST00000554819 DMBT1Q9UGM3 2413 aaPredicted RBP0.17□□□□□ -2.38
SCFD1-214ENST00000554819 RTL1A6NKG5 1358 aa0.17□□□□□ -2.38
SCFD1-214ENST00000554819 MGAM2Q2M2H8 2515 aa0.17□□□□□ -2.38
SCFD1-214ENST00000554819 UBR5O95071 2799 aaPredicted RBP0.17□□□□□ -2.38
SCFD1-214ENST00000554819 ATRQ13535 2644 aa0.17□□□□□ -2.38
SCFD1-214ENST00000554819 SPG11Q96JI7 2443 aa0.16□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms