RNA–Protein interactions for RNA: ENST00000554174.1

LRP1-207, Transcript of LDL receptor related protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRP1, Length 2,175 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-207ENST00000554174 C14orf144Q96I85 54 aa9.64□□□□□ -0.87
LRP1-207ENST00000554174 SRSF8Q9BRL6 282 aaKnown RBP9.64□□□□□ -0.87
LRP1-207ENST00000554174 VPS13CQ709C8 3753 aa9.63□□□□□ -0.87
LRP1-207ENST00000554174 VWC2LB2RUY7 222 aa9.63□□□□□ -0.87
LRP1-207ENST00000554174 BMPR1BO00238 502 aa9.63□□□□□ -0.87
LRP1-207ENST00000554174 GATCO43716 136 aaKnown RBP9.63□□□□□ -0.87
LRP1-207ENST00000554174 TOX4O94842 621 aa9.63□□□□□ -0.87
LRP1-207ENST00000554174 TCRAP04437 139 aa9.63□□□□□ -0.87
LRP1-207ENST00000554174 AMY1AP04745 511 aa9.63□□□□□ -0.87
LRP1-207ENST00000554174 PAX1P15863 534 aa9.63□□□□□ -0.87
LRP1-207ENST00000554174 HOXB4P17483 251 aaPredicted RBP9.63□□□□□ -0.87
LRP1-207ENST00000554174 GPR6P46095 362 aaPredicted RBP9.63□□□□□ -0.87
LRP1-207ENST00000554174 GDF5OSQ5U4N7 250 aa9.63□□□□□ -0.87
LRP1-207ENST00000554174 Q6ZWC4 215 aa9.63□□□□□ -0.87
LRP1-207ENST00000554174 BAGE3Q86Y29 109 aa9.63□□□□□ -0.87
LRP1-207ENST00000554174 EXOC3-AS1Q8N2X6 119 aa9.63□□□□□ -0.87
LRP1-207ENST00000554174 C5orf17Q8NAS9 161 aa9.63□□□□□ -0.87
LRP1-207ENST00000554174 NUP35Q8NFH5 326 aa9.63□□□□□ -0.87
LRP1-207ENST00000554174 C17orf77Q96MU5 243 aa9.63□□□□□ -0.87
LRP1-207ENST00000554174 MS4A10Q96PG2 267 aa9.63□□□□□ -0.87
LRP1-207ENST00000554174 RBM14Q96PK6 669 aaKnown RBP9.63□□□□□ -0.87
LRP1-207ENST00000554174 ATG101Q9BSB4 218 aa9.63□□□□□ -0.87
LRP1-207ENST00000554174 MLST8Q9BVC4 326 aa9.63□□□□□ -0.87
LRP1-207ENST00000554174 UBTD1Q9HAC8 227 aa9.63□□□□□ -0.87
LRP1-207ENST00000554174 COL12A1Q99715 3063 aa9.63□□□□□ -0.87
LRP1-207ENST00000554174 TRAV8-1A0A0A6YYK1 113 aa9.63□□□□□ -0.87
LRP1-207ENST00000554174 TSTD3H0UI37 97 aa9.63□□□□□ -0.87
LRP1-207ENST00000554174 ESDP10768 282 aa9.63□□□□□ -0.87
LRP1-207ENST00000554174 DEFA6Q01524 100 aa9.63□□□□□ -0.87
LRP1-207ENST00000554174 Q0VG73 95 aa9.63□□□□□ -0.87
LRP1-207ENST00000554174 SLAQ13239 276 aa9.63□□□□□ -0.87
LRP1-207ENST00000554174 PRR31Q5SQ13 230 aa9.63□□□□□ -0.87
LRP1-207ENST00000554174 WDR73Q6P4I2 378 aa9.63□□□□□ -0.87
LRP1-207ENST00000554174 KIR3DL3Q8N743 410 aa9.63□□□□□ -0.87
LRP1-207ENST00000554174 GPR82Q96P67 336 aa9.63□□□□□ -0.87
LRP1-207ENST00000554174 RCHY1Q96PM5 261 aa9.63□□□□□ -0.87
LRP1-207ENST00000554174 FANCD2OSQ96PS1 177 aa9.63□□□□□ -0.87
LRP1-207ENST00000554174 NCBP2LA6PVI3 153 aaKnown RBP9.62□□□□□ -0.87
LRP1-207ENST00000554174 C19orf84I3L1E1 186 aa9.62□□□□□ -0.87
LRP1-207ENST00000554174 SCGB1D1O95968 90 aa9.62□□□□□ -0.87
LRP1-207ENST00000554174 MT-ND6P03923 174 aa9.62□□□□□ -0.87
LRP1-207ENST00000554174 ZNF491Q8N8L2 437 aa9.62□□□□□ -0.87
LRP1-207ENST00000554174 GRAMD2BQ96HH9 432 aa9.62□□□□□ -0.87
LRP1-207ENST00000554174 NEU1Q99519 415 aa9.62□□□□□ -0.87
LRP1-207ENST00000554174 TOMM40O96008 361 aa9.61□□□□□ -0.87
LRP1-207ENST00000554174 LTAP01374 205 aa9.61□□□□□ -0.87
LRP1-207ENST00000554174 SRIP30626 198 aa9.61□□□□□ -0.87
LRP1-207ENST00000554174 CELSR1Q9NYQ6 3014 aa9.61□□□□□ -0.87
LRP1-207ENST00000554174 HIGD1CA8MV81 97 aa9.61□□□□□ -0.87
LRP1-207ENST00000554174 A8MWP6 167 aa9.61□□□□□ -0.87
LRP1-207ENST00000554174 F8W735 103 aaPredicted RBP9.61□□□□□ -0.87
LRP1-207ENST00000554174 IL4P05112 153 aa9.61□□□□□ -0.87
LRP1-207ENST00000554174 HIST1H1EP10412 219 aaKnown RBP9.61□□□□□ -0.87
LRP1-207ENST00000554174 IQCJQ1A5X6 159 aa9.61□□□□□ -0.87
LRP1-207ENST00000554174 ZNF562Q6V9R5 426 aa9.61□□□□□ -0.87
LRP1-207ENST00000554174 C1orf122Q6ZSJ8 110 aa9.61□□□□□ -0.87
LRP1-207ENST00000554174 Q8N6K4 173 aa9.61□□□□□ -0.87
LRP1-207ENST00000554174 ITLN2Q8WWU7 325 aaPredicted RBP9.61□□□□□ -0.87
LRP1-207ENST00000554174 SHANK2-AS3Q9BTD1 123 aa9.61□□□□□ -0.87
LRP1-207ENST00000554174 SIRPDQ9H106 197 aa9.61□□□□□ -0.87
LRP1-207ENST00000554174 PRORYQ9H606 182 aa9.61□□□□□ -0.87
LRP1-207ENST00000554174 TMEM14CQ9P0S9 112 aa9.61□□□□□ -0.87
LRP1-207ENST00000554174 RNF114Q9Y508 228 aa9.61□□□□□ -0.87
LRP1-207ENST00000554174 IGLV11-55A0A075B6I3 123 aa9.6□□□□□ -0.87
LRP1-207ENST00000554174 IGLV2-11P01706 119 aa9.6□□□□□ -0.87
LRP1-207ENST00000554174 IGHV3-23P01764 117 aa9.6□□□□□ -0.87
LRP1-207ENST00000554174 HLA-DQA1P01909 254 aa9.6□□□□□ -0.87
LRP1-207ENST00000554174 TPPP2P59282 170 aa9.6□□□□□ -0.87
LRP1-207ENST00000554174 USF2Q15853 346 aaPredicted RBP9.6□□□□□ -0.87
LRP1-207ENST00000554174 TCF24Q7RTU0 167 aa9.6□□□□□ -0.87
LRP1-207ENST00000554174 TSKUQ8WUA8 353 aa9.6□□□□□ -0.87
LRP1-207ENST00000554174 ARPC1AQ92747 370 aa9.6□□□□□ -0.87
LRP1-207ENST00000554174 RNF125Q96EQ8 232 aa9.6□□□□□ -0.87
LRP1-207ENST00000554174 FMC1Q96HJ9 113 aa9.6□□□□□ -0.87
LRP1-207ENST00000554174 ASCL2Q99929 193 aa9.6□□□□□ -0.87
LRP1-207ENST00000554174 HSPB9Q9BQS6 159 aa9.6□□□□□ -0.87
LRP1-207ENST00000554174 NAGKQ9UJ70 344 aa9.6□□□□□ -0.87
LRP1-207ENST00000554174 H3BRN7 92 aa9.6□□□□□ -0.87
LRP1-207ENST00000554174 APCSP02743 223 aa9.6□□□□□ -0.87
LRP1-207ENST00000554174 RPL19P84098 196 aaKnown RBP9.6□□□□□ -0.87
LRP1-207ENST00000554174 FAM120AOSQ5T036 256 aa9.6□□□□□ -0.87
LRP1-207ENST00000554174 AJUBAQ96IF1 538 aa9.6□□□□□ -0.87
LRP1-207ENST00000554174 SSBP4Q9BWG4 385 aaPredicted RBP9.6□□□□□ -0.87
LRP1-207ENST00000554174 PRSS22Q9GZN4 317 aa9.6□□□□□ -0.87
LRP1-207ENST00000554174 ZNF331Q9NQX6 463 aaPredicted RBP9.6□□□□□ -0.87
LRP1-207ENST00000554174 OTORQ9NRC9 128 aa9.6□□□□□ -0.87
LRP1-207ENST00000554174 POLR3KQ9Y2Y1 108 aaPredicted RBP9.6□□□□□ -0.87
LRP1-207ENST00000554174 CACNA1BQ00975 2339 aa9.6□□□□□ -0.87
LRP1-207ENST00000554174 TRBV19A0A075B6N1 114 aa9.59□□□□□ -0.87
LRP1-207ENST00000554174 C19orf71A6NCJ1 209 aa9.59□□□□□ -0.87
LRP1-207ENST00000554174 NPIPB5A8MRT5 1133 aa9.59□□□□□ -0.87
LRP1-207ENST00000554174 IGLC2P0DOY2 106 aa9.59□□□□□ -0.87
LRP1-207ENST00000554174 EGR2P11161 476 aaPredicted RBP9.59□□□□□ -0.87
LRP1-207ENST00000554174 GNLYP22749 145 aa9.59□□□□□ -0.87
LRP1-207ENST00000554174 PAFAH1B2P68402 229 aa9.59□□□□□ -0.87
LRP1-207ENST00000554174 CCDC144NLQ6NUI1 221 aa9.59□□□□□ -0.87
LRP1-207ENST00000554174 GOLT1AQ6ZVE7 132 aa9.59□□□□□ -0.87
LRP1-207ENST00000554174 CIARTQ8N365 385 aaPredicted RBP9.59□□□□□ -0.87
LRP1-207ENST00000554174 WIPF2Q8TF74 440 aaPredicted RBP9.59□□□□□ -0.87
LRP1-207ENST00000554174 GTSF1Q8WW33 167 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms