RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 V9GYV3 84 aa9□□□□□ -0.97
RAB5C-208ENST00000551338 USP24Q9UPU5 2620 aa9□□□□□ -0.97
RAB5C-208ENST00000551338 ABCA1O95477 2261 aa9□□□□□ -0.97
RAB5C-208ENST00000551338 ACACBO00763 2458 aa8.99□□□□□ -0.97
RAB5C-208ENST00000551338 TRBV9A0A0B4J1U6 114 aa8.99□□□□□ -0.97
RAB5C-208ENST00000551338 TRAV20A0A0B4J274 112 aa8.99□□□□□ -0.97
RAB5C-208ENST00000551338 PGPA6NDG6 321 aa8.99□□□□□ -0.97
RAB5C-208ENST00000551338 B4DSR2 109 aa8.99□□□□□ -0.97
RAB5C-208ENST00000551338 SLC17A3O00476 420 aa8.99□□□□□ -0.97
RAB5C-208ENST00000551338 AVPP01185 164 aa8.99□□□□□ -0.97
RAB5C-208ENST00000551338 AMY1AP04745 511 aa8.99□□□□□ -0.97
RAB5C-208ENST00000551338 HIST1H1EP10412 219 aaKnown RBP8.99□□□□□ -0.97
RAB5C-208ENST00000551338 AKR1D1P51857 326 aa8.99□□□□□ -0.97
RAB5C-208ENST00000551338 CRIP2P52943 208 aaPredicted RBP8.99□□□□□ -0.97
RAB5C-208ENST00000551338 RANP62826 216 aaKnown RBP8.99□□□□□ -0.97
RAB5C-208ENST00000551338 FOXL1Q12952 345 aa8.99□□□□□ -0.97
RAB5C-208ENST00000551338 BCL6BQ8N143 479 aaPredicted RBP8.99□□□□□ -0.97
RAB5C-208ENST00000551338 C5orf17Q8NAS9 161 aa8.99□□□□□ -0.97
RAB5C-208ENST00000551338 ZNF502Q8TBZ5 544 aa8.99□□□□□ -0.97
RAB5C-208ENST00000551338 VN1R17PQ8TDU5 208 aa8.99□□□□□ -0.97
RAB5C-208ENST00000551338 LINC00479Q96M42 142 aa8.99□□□□□ -0.97
RAB5C-208ENST00000551338 TMEM68Q96MH6 324 aa8.99□□□□□ -0.97
RAB5C-208ENST00000551338 TXN2Q99757 166 aa8.99□□□□□ -0.97
RAB5C-208ENST00000551338 C7orf69Q9H7B7 122 aa8.99□□□□□ -0.97
RAB5C-208ENST00000551338 HIF1ANQ9NWT6 349 aa8.99□□□□□ -0.97
RAB5C-208ENST00000551338 EPDR1Q9UM22 224 aa8.99□□□□□ -0.97
RAB5C-208ENST00000551338 DOPEY1Q5JWR5 2465 aa8.99□□□□□ -0.97
RAB5C-208ENST00000551338 RELNP78509 3460 aa8.99□□□□□ -0.97
RAB5C-208ENST00000551338 DCHS2Q6V1P9 2916 aa8.98□□□□□ -0.97
RAB5C-208ENST00000551338 TRAV34A0A0B4J273 112 aa8.98□□□□□ -0.97
RAB5C-208ENST00000551338 A6NDX4 124 aa8.98□□□□□ -0.97
RAB5C-208ENST00000551338 PPP5D1E7EU14 171 aa8.98□□□□□ -0.97
RAB5C-208ENST00000551338 G3V318 75 aa8.98□□□□□ -0.97
RAB5C-208ENST00000551338 ISLRO14498 428 aa8.98□□□□□ -0.97
RAB5C-208ENST00000551338 IGLC2P0DOY2 106 aa8.98□□□□□ -0.97
RAB5C-208ENST00000551338 ADMP35318 185 aa8.98□□□□□ -0.97
RAB5C-208ENST00000551338 NDUFA6P56556 154 aa8.98□□□□□ -0.97
RAB5C-208ENST00000551338 KRTAP10-9P60411 292 aa8.98□□□□□ -0.97
RAB5C-208ENST00000551338 TMEM183BQ1AE95 376 aa8.98□□□□□ -0.97
RAB5C-208ENST00000551338 ACTL10Q5JWF8 245 aa8.98□□□□□ -0.97
RAB5C-208ENST00000551338 CHRDL1Q9BU40 450 aa8.98□□□□□ -0.97
RAB5C-208ENST00000551338 TMUB1Q9BVT8 246 aa8.98□□□□□ -0.97
RAB5C-208ENST00000551338 OTORQ9NRC9 128 aa8.98□□□□□ -0.97
RAB5C-208ENST00000551338 RPH3ALQ9UNE2 315 aa8.98□□□□□ -0.97
RAB5C-208ENST00000551338 SMG1Q96Q15 3661 aaKnown RBP8.98□□□□□ -0.97
RAB5C-208ENST00000551338 TRAV9-1A0A075B6T8 112 aa8.97□□□□□ -0.97
RAB5C-208ENST00000551338 OR2T8A6NH00 312 aa8.97□□□□□ -0.97
RAB5C-208ENST00000551338 CTSGP08311 255 aa8.97□□□□□ -0.97
RAB5C-208ENST00000551338 HOXA5P20719 270 aa8.97□□□□□ -0.97
RAB5C-208ENST00000551338 COL8A1P27658 744 aa8.97□□□□□ -0.97
RAB5C-208ENST00000551338 ERVFC1-1P60608 527 aa8.97□□□□□ -0.97
RAB5C-208ENST00000551338 RPL15P61313 204 aaKnown RBP8.97□□□□□ -0.97
RAB5C-208ENST00000551338 RHOGP84095 191 aa8.97□□□□□ -0.97
RAB5C-208ENST00000551338 BPIFA4PQ86YQ2 179 aa8.97□□□□□ -0.97
RAB5C-208ENST00000551338 LINC00518Q8N0U6 118 aa8.97□□□□□ -0.97
RAB5C-208ENST00000551338 NHLRC2Q8NBF2 726 aa8.97□□□□□ -0.97
RAB5C-208ENST00000551338 BTF3L4Q96K17 158 aa8.97□□□□□ -0.97
RAB5C-208ENST00000551338 CCDC140Q96MF4 163 aa8.97□□□□□ -0.97
RAB5C-208ENST00000551338 ATG101Q9BSB4 218 aa8.97□□□□□ -0.97
RAB5C-208ENST00000551338 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.96□□□□□ -0.971e-6■■■■□ 21.1
RAB5C-208ENST00000551338 TRBV19A0A075B6N1 114 aa8.96□□□□□ -0.98
RAB5C-208ENST00000551338 ZNF320A2RRD8 509 aa8.96□□□□□ -0.98
RAB5C-208ENST00000551338 ZNF98A6NK75 572 aa8.96□□□□□ -0.98
RAB5C-208ENST00000551338 H3BUX3 64 aa8.96□□□□□ -0.98
RAB5C-208ENST00000551338 TCRAP04437 139 aa8.96□□□□□ -0.98
RAB5C-208ENST00000551338 MGST1P10620 155 aaKnown RBP8.96□□□□□ -0.98
RAB5C-208ENST00000551338 GATA3P23771 443 aa8.96□□□□□ -0.98
RAB5C-208ENST00000551338 GPR183P32249 361 aa8.96□□□□□ -0.98
RAB5C-208ENST00000551338 LY6EQ16553 131 aa8.96□□□□□ -0.98
RAB5C-208ENST00000551338 RPEL1Q2QD12 228 aa8.96□□□□□ -0.98
RAB5C-208ENST00000551338 C15orf32Q32M92 178 aa8.96□□□□□ -0.98
RAB5C-208ENST00000551338 FAM231DQ6ZW35 169 aa8.96□□□□□ -0.98
RAB5C-208ENST00000551338 BAGE2Q86Y30 109 aa8.96□□□□□ -0.98
RAB5C-208ENST00000551338 LINC01356Q8N9X3 169 aa8.96□□□□□ -0.98
RAB5C-208ENST00000551338 OR4F17Q8NGA8 305 aa8.96□□□□□ -0.98
RAB5C-208ENST00000551338 C17orf77Q96MU5 243 aa8.96□□□□□ -0.98
RAB5C-208ENST00000551338 RNASE7Q9H1E1 156 aaKnown RBP8.96□□□□□ -0.98
RAB5C-208ENST00000551338 ZFAND3Q9H8U3 227 aa8.96□□□□□ -0.98
RAB5C-208ENST00000551338 KLF12Q9Y4X4 402 aa8.96□□□□□ -0.98
RAB5C-208ENST00000551338 TRAV41A0A0B4J266 112 aa8.95□□□□□ -0.98
RAB5C-208ENST00000551338 SCGB2A1O75556 95 aa8.95□□□□□ -0.98
RAB5C-208ENST00000551338 UBE2G1P62253 170 aa8.95□□□□□ -0.98
RAB5C-208ENST00000551338 IBA57Q5T440 356 aaKnown RBP8.95□□□□□ -0.98
RAB5C-208ENST00000551338 SIGLEC15Q6ZMC9 328 aa8.95□□□□□ -0.98
RAB5C-208ENST00000551338 EXOC3-AS1Q8N2X6 119 aa8.95□□□□□ -0.98
RAB5C-208ENST00000551338 MBD6Q96DN6 1003 aa8.95□□□□□ -0.98
RAB5C-208ENST00000551338 LRBAP50851 2863 aa8.95□□□□□ -0.98
RAB5C-208ENST00000551338 IGSF10Q6WRI0 2623 aa8.95□□□□□ -0.98
RAB5C-208ENST00000551338 IFITM10A6NMD0 228 aa8.94□□□□□ -0.98
RAB5C-208ENST00000551338 S100A9P06702 114 aaKnown RBP8.94□□□□□ -0.98
RAB5C-208ENST00000551338 LOXL1Q08397 574 aaPredicted RBP8.94□□□□□ -0.98
RAB5C-208ENST00000551338 Q86TA4 180 aa8.94□□□□□ -0.98
RAB5C-208ENST00000551338 TMEM190Q8WZ59 177 aa8.94□□□□□ -0.98
RAB5C-208ENST00000551338 EEF1AKMT3Q96AZ1 226 aa8.94□□□□□ -0.98
RAB5C-208ENST00000551338 SMIM12Q96EX1 92 aa8.94□□□□□ -0.98
RAB5C-208ENST00000551338 FMC1Q96HJ9 113 aa8.94□□□□□ -0.98
RAB5C-208ENST00000551338 SGK494Q96LW2 274 aa8.94□□□□□ -0.98
RAB5C-208ENST00000551338 BEX4Q9NWD9 120 aaPredicted RBP8.94□□□□□ -0.98
RAB5C-208ENST00000551338 RNF24Q9Y225 148 aa8.94□□□□□ -0.98
RAB5C-208ENST00000551338 TRBV6-1A0A0K0K1D8 114 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms