RNA–Protein interactions for RNA: ENST00000550020.6

TMEM116-209, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-209ENST00000550020 PRDM13Q9H4Q3 707 aa7.07□□□□□ -1.28
TMEM116-209ENST00000550020 ZNF586Q9NXT0 402 aa7.07□□□□□ -1.28
TMEM116-209ENST00000550020 RPH3ALQ9UNE2 315 aa7.07□□□□□ -1.28
TMEM116-209ENST00000550020 POLR3KQ9Y2Y1 108 aaPredicted RBP7.07□□□□□ -1.28
TMEM116-209ENST00000550020 ZGRF1Q86YA3 2104 aa7.07□□□□□ -1.28
TMEM116-209ENST00000550020 PLCE1Q9P212 2302 aa7.06□□□□□ -1.28
TMEM116-209ENST00000550020 RIF1Q5UIP0 2472 aaKnown RBP7.06□□□□□ -1.28
TMEM116-209ENST00000550020 BMPR1BO00238 502 aa7.06□□□□□ -1.28
TMEM116-209ENST00000550020 ZNF253O75346 499 aa7.06□□□□□ -1.28
TMEM116-209ENST00000550020 OR2J3O76001 311 aa7.06□□□□□ -1.28
TMEM116-209ENST00000550020 NDUFB8O95169 186 aa7.06□□□□□ -1.28
TMEM116-209ENST00000550020 CT45A10P0DMU9 189 aa7.06□□□□□ -1.28
TMEM116-209ENST00000550020 IGLC2P0DOY2 106 aa7.06□□□□□ -1.28
TMEM116-209ENST00000550020 RAB4AP20338 218 aa7.06□□□□□ -1.28
TMEM116-209ENST00000550020 GNLYP22749 145 aa7.06□□□□□ -1.28
TMEM116-209ENST00000550020 COL8A1P27658 744 aa7.06□□□□□ -1.28
TMEM116-209ENST00000550020 DDTP30046 118 aa7.06□□□□□ -1.28
TMEM116-209ENST00000550020 HBBP68871 147 aa7.06□□□□□ -1.28
TMEM116-209ENST00000550020 KLK9Q2XQG4 91 aa7.06□□□□□ -1.28
TMEM116-209ENST00000550020 LBHQ53QV2 105 aaPredicted RBP7.06□□□□□ -1.28
TMEM116-209ENST00000550020 LDLRAD2Q5SZI1 272 aa7.06□□□□□ -1.28
TMEM116-209ENST00000550020 DMRTA1Q5VZB9 504 aa7.06□□□□□ -1.28
TMEM116-209ENST00000550020 MRPL54Q6P161 138 aaKnown RBP7.06□□□□□ -1.28
TMEM116-209ENST00000550020 RBPMS2Q6ZRY4 209 aaKnown RBP7.06□□□□□ -1.28
TMEM116-209ENST00000550020 Q86TA4 180 aa7.06□□□□□ -1.28
TMEM116-209ENST00000550020 NHLRC2Q8NBF2 726 aa7.06□□□□□ -1.28
TMEM116-209ENST00000550020 BORCS7Q96B45 105 aa7.06□□□□□ -1.28
TMEM116-209ENST00000550020 LINC00479Q96M42 142 aa7.06□□□□□ -1.28
TMEM116-209ENST00000550020 PIMREGQ9BSJ6 248 aa7.06□□□□□ -1.28
TMEM116-209ENST00000550020 PRSS22Q9GZN4 317 aa7.06□□□□□ -1.28
TMEM116-209ENST00000550020 C7orf69Q9H7B7 122 aa7.06□□□□□ -1.28
TMEM116-209ENST00000550020 RABAC1Q9UI14 185 aa7.06□□□□□ -1.28
TMEM116-209ENST00000550020 NAGKQ9UJ70 344 aa7.06□□□□□ -1.28
TMEM116-209ENST00000550020 KLK9Q9UKQ9 250 aa7.06□□□□□ -1.28
TMEM116-209ENST00000550020 APC2O95996 2303 aa7.05□□□□□ -1.28
TMEM116-209ENST00000550020 CEP250Q9BV73 2442 aa7.05□□□□□ -1.28
TMEM116-209ENST00000550020 A0A1W2PRD5 423 aa7.05□□□□□ -1.28
TMEM116-209ENST00000550020 A0A1W2PRF3 423 aa7.05□□□□□ -1.28
TMEM116-209ENST00000550020 A0A1W2PRM7 423 aa7.05□□□□□ -1.28
TMEM116-209ENST00000550020 GRIFINA4D1Z8 144 aa7.05□□□□□ -1.28
TMEM116-209ENST00000550020 C19orf71A6NCJ1 209 aa7.05□□□□□ -1.28
TMEM116-209ENST00000550020 HIGD1CA8MV81 97 aa7.05□□□□□ -1.28
TMEM116-209ENST00000550020 OVOL3O00110 214 aa7.05□□□□□ -1.28
TMEM116-209ENST00000550020 NPFFO15130 113 aa7.05□□□□□ -1.28
TMEM116-209ENST00000550020 SERF1AO75920 110 aa7.05□□□□□ -1.28
TMEM116-209ENST00000550020 ZFP36P26651 326 aaKnown RBP7.05□□□□□ -1.28
TMEM116-209ENST00000550020 LMO4P61968 165 aa7.05□□□□□ -1.28
TMEM116-209ENST00000550020 SAPCD1Q5SSQ6 148 aa7.05□□□□□ -1.28
TMEM116-209ENST00000550020 LEMD1Q68G75 181 aa7.05□□□□□ -1.28
TMEM116-209ENST00000550020 C19orf35Q6ZS72 473 aa7.05□□□□□ -1.28
TMEM116-209ENST00000550020 TMEM256Q8N2U0 113 aa7.05□□□□□ -1.28
TMEM116-209ENST00000550020 NUP35Q8NFH5 326 aa7.05□□□□□ -1.28
TMEM116-209ENST00000550020 KCNS1Q96KK3 526 aa7.05□□□□□ -1.28
TMEM116-209ENST00000550020 FANCD2OSQ96PS1 177 aa7.05□□□□□ -1.28
TMEM116-209ENST00000550020 NEU1Q99519 415 aa7.05□□□□□ -1.28
TMEM116-209ENST00000550020 GSX1Q9H4S2 264 aaPredicted RBP7.05□□□□□ -1.28
TMEM116-209ENST00000550020 FBXL7Q9UJT9 491 aa7.05□□□□□ -1.28
TMEM116-209ENST00000550020 DIDO1Q9BTC0 2240 aaKnown RBP7.05□□□□□ -1.28
TMEM116-209ENST00000550020 ARFGEF3Q5TH69 2177 aa7.04□□□□□ -1.28
TMEM116-209ENST00000550020 IGHV7-81A0A0B4J1V7 117 aa7.04□□□□□ -1.28
TMEM116-209ENST00000550020 TRAV20A0A0B4J274 112 aa7.04□□□□□ -1.28
TMEM116-209ENST00000550020 ZNF705FA8MVS1 300 aaPredicted RBP7.04□□□□□ -1.28
TMEM116-209ENST00000550020 NPIPB6E9PJ23 425 aa7.04□□□□□ -1.28
TMEM116-209ENST00000550020 SPINK4O60575 86 aa7.04□□□□□ -1.28
TMEM116-209ENST00000550020 ZNF705DP0CH99 300 aaPredicted RBP7.04□□□□□ -1.28
TMEM116-209ENST00000550020 ZNF705BP0CI00 300 aaPredicted RBP7.04□□□□□ -1.28
TMEM116-209ENST00000550020 SRIP30626 198 aa7.04□□□□□ -1.28
TMEM116-209ENST00000550020 DSCR9P59020 149 aa7.04□□□□□ -1.28
TMEM116-209ENST00000550020 RIGQ13278 110 aa7.04□□□□□ -1.28
TMEM116-209ENST00000550020 KLF5Q13887 457 aaPredicted RBP7.04□□□□□ -1.28
TMEM116-209ENST00000550020 PSG3Q16557 428 aa7.04□□□□□ -1.28
TMEM116-209ENST00000550020 UNQ5815/PRO19632Q6UWF5 114 aa7.04□□□□□ -1.28
TMEM116-209ENST00000550020 GOLT1AQ6ZVE7 132 aa7.04□□□□□ -1.28
TMEM116-209ENST00000550020 PRNTQ86SH4 94 aa7.04□□□□□ -1.28
TMEM116-209ENST00000550020 CIARTQ8N365 385 aaPredicted RBP7.04□□□□□ -1.28
TMEM116-209ENST00000550020 Q8N9W7 124 aa7.04□□□□□ -1.28
TMEM116-209ENST00000550020 ZNF414Q96IQ9 312 aa7.04□□□□□ -1.28
TMEM116-209ENST00000550020 TBX15Q96SF7 602 aa7.04□□□□□ -1.28
TMEM116-209ENST00000550020 FAM103A1Q9BTL3 118 aaKnown RBP7.04□□□□□ -1.28
TMEM116-209ENST00000550020 TMUB1Q9BVT8 246 aa7.04□□□□□ -1.28
TMEM116-209ENST00000550020 BPESC1Q9GZL8 116 aa7.04□□□□□ -1.28
TMEM116-209ENST00000550020 GNB4Q9HAV0 340 aa7.04□□□□□ -1.28
TMEM116-209ENST00000550020 TRBV7-1A0A0A6YYK4 115 aa7.03□□□□□ -1.28
TMEM116-209ENST00000550020 CHEK1O14757 476 aa7.03□□□□□ -1.28
TMEM116-209ENST00000550020 GPX1P07203 203 aa7.03□□□□□ -1.28
TMEM116-209ENST00000550020 CD24P25063 80 aa7.03□□□□□ -1.28
TMEM116-209ENST00000550020 SAA4P35542 130 aa7.03□□□□□ -1.28
TMEM116-209ENST00000550020 RPS20P60866 119 aaKnown RBP7.03□□□□□ -1.28
TMEM116-209ENST00000550020 SLC35B1P78383 322 aa7.03□□□□□ -1.28
TMEM116-209ENST00000550020 RELQ04864 619 aaPredicted RBP7.03□□□□□ -1.28
TMEM116-209ENST00000550020 ASPHD1Q5U4P2 390 aa7.03□□□□□ -1.28
TMEM116-209ENST00000550020 RUSC1-AS1Q66K80 236 aa7.03□□□□□ -1.28
TMEM116-209ENST00000550020 CLEC2AQ6UVW9 174 aa7.03□□□□□ -1.28
TMEM116-209ENST00000550020 SIGLEC15Q6ZMC9 328 aa7.03□□□□□ -1.28
TMEM116-209ENST00000550020 REC114Q7Z4M0 266 aa7.03□□□□□ -1.28
TMEM116-209ENST00000550020 OR2D3Q8NGH3 330 aa7.03□□□□□ -1.28
TMEM116-209ENST00000550020 FAM168AQ92567 244 aa7.03□□□□□ -1.28
TMEM116-209ENST00000550020 EEF1AKMT3Q96AZ1 226 aa7.03□□□□□ -1.28
TMEM116-209ENST00000550020 HSPB9Q9BQS6 159 aa7.03□□□□□ -1.28
TMEM116-209ENST00000550020 NDFIP1Q9BT67 221 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms