RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 TTC9CQ8N5M4 171 aa1.63□□□□□ -2.15
SNHG1-224ENST00000545688 SPANXA2-OT1Q8N9U9 137 aa1.63□□□□□ -2.15
SNHG1-224ENST00000545688 DYNLRB2Q8TF09 96 aa1.63□□□□□ -2.15
SNHG1-224ENST00000545688 DEFB104AQ8WTQ1 72 aa1.63□□□□□ -2.15
SNHG1-224ENST00000545688 PP6455Q8WZ26 134 aa1.63□□□□□ -2.15
SNHG1-224ENST00000545688 YPEL2Q96QA6 119 aa1.63□□□□□ -2.15
SNHG1-224ENST00000545688 APOL4Q9BPW4 351 aa1.63□□□□□ -2.15
SNHG1-224ENST00000545688 TPPP3Q9BW30 176 aa1.63□□□□□ -2.15
SNHG1-224ENST00000545688 OR51V1Q9H2C8 321 aa1.63□□□□□ -2.15
SNHG1-224ENST00000545688 MRPL27Q9P0M9 148 aaKnown RBP1.63□□□□□ -2.15
SNHG1-224ENST00000545688 METTL1Q9UBP6 276 aaKnown RBP1.63□□□□□ -2.15
SNHG1-224ENST00000545688 AP3M1Q9Y2T2 418 aa1.63□□□□□ -2.15
SNHG1-224ENST00000545688 FAM32AQ9Y421 112 aaKnown RBP1.63□□□□□ -2.15
SNHG1-224ENST00000545688 FSIP2Q5CZC0 6907 aa1.62□□□□□ -2.15
SNHG1-224ENST00000545688 A0A1B0GW64 132 aa1.62□□□□□ -2.15
SNHG1-224ENST00000545688 BBIP1A8MTZ0 92 aa1.62□□□□□ -2.15
SNHG1-224ENST00000545688 SERPINA3P01011 423 aa1.62□□□□□ -2.15
SNHG1-224ENST00000545688 IFNA21P01568 189 aa1.62□□□□□ -2.15
SNHG1-224ENST00000545688 IFNA17P01571 189 aa1.62□□□□□ -2.15
SNHG1-224ENST00000545688 IFNGP01579 166 aa1.62□□□□□ -2.15
SNHG1-224ENST00000545688 HBZP02008 142 aa1.62□□□□□ -2.15
SNHG1-224ENST00000545688 PRH1P02810 166 aa1.62□□□□□ -2.15
SNHG1-224ENST00000545688 ISG15P05161 165 aa1.62□□□□□ -2.15
SNHG1-224ENST00000545688 CRYGCP07315 174 aa1.62□□□□□ -2.15
SNHG1-224ENST00000545688 SAA2P0DJI9 122 aaPredicted RBP1.62□□□□□ -2.15
SNHG1-224ENST00000545688 RRM2P31350 389 aa1.62□□□□□ -2.15
SNHG1-224ENST00000545688 MAGEA2P43356 314 aa1.62□□□□□ -2.15
SNHG1-224ENST00000545688 MAP2K4P45985 399 aa1.62□□□□□ -2.15
SNHG1-224ENST00000545688 CDK5Q00535 292 aa1.62□□□□□ -2.15
SNHG1-224ENST00000545688 ATP5G2Q06055 141 aa1.62□□□□□ -2.15
SNHG1-224ENST00000545688 MED21Q13503 144 aa1.62□□□□□ -2.15
SNHG1-224ENST00000545688 KISS1Q15726 138 aa1.62□□□□□ -2.15
SNHG1-224ENST00000545688 PIGYQ3MUY2 71 aa1.62□□□□□ -2.15
SNHG1-224ENST00000545688 ORMDL2Q53FV1 153 aa1.62□□□□□ -2.15
SNHG1-224ENST00000545688 BCL2L15Q5TBC7 163 aa1.62□□□□□ -2.15
SNHG1-224ENST00000545688 ZNF322Q6U7Q0 402 aaPredicted RBP1.62□□□□□ -2.15
SNHG1-224ENST00000545688 ZNF767PQ75MW2 155 aa1.62□□□□□ -2.15
SNHG1-224ENST00000545688 SSX6Q7RTT6 188 aa1.62□□□□□ -2.15
SNHG1-224ENST00000545688 APRG1Q8IVJ8 170 aa1.62□□□□□ -2.15
SNHG1-224ENST00000545688 HSD17B11Q8NBQ5 300 aa1.62□□□□□ -2.15
SNHG1-224ENST00000545688 ZNF680Q8NEM1 530 aa1.62□□□□□ -2.15
SNHG1-224ENST00000545688 OR1L1Q8NH94 360 aa1.62□□□□□ -2.15
SNHG1-224ENST00000545688 TLCD1Q96CP7 247 aa1.62□□□□□ -2.15
SNHG1-224ENST00000545688 PYURFQ96I23 114 aa1.62□□□□□ -2.15
SNHG1-224ENST00000545688 OPALINQ96PE5 141 aa1.62□□□□□ -2.15
SNHG1-224ENST00000545688 CNN2Q99439 309 aaKnown RBP1.62□□□□□ -2.15
SNHG1-224ENST00000545688 TIMM17AQ99595 171 aa1.62□□□□□ -2.15
SNHG1-224ENST00000545688 TMEM70Q9BUB7 260 aa1.62□□□□□ -2.15
SNHG1-224ENST00000545688 ZNF436Q9C0F3 470 aaPredicted RBP1.62□□□□□ -2.15
SNHG1-224ENST00000545688 GORASP2Q9H8Y8 452 aa1.62□□□□□ -2.15
SNHG1-224ENST00000545688 ARMC1Q9NVT9 282 aa1.62□□□□□ -2.15
SNHG1-224ENST00000545688 JPT1Q9UK76 154 aa1.62□□□□□ -2.15
SNHG1-224ENST00000545688 WASHC3Q9Y3C0 194 aa1.62□□□□□ -2.15
SNHG1-224ENST00000545688 CBY1Q9Y3M2 126 aa1.62□□□□□ -2.15
SNHG1-224ENST00000545688 LOC107986453A0A1B0GWG9 222 aa1.61□□□□□ -2.15
SNHG1-224ENST00000545688 OR4C46A6NHA9 309 aa1.61□□□□□ -2.15
SNHG1-224ENST00000545688 E7EUB6 86 aa1.61□□□□□ -2.15
SNHG1-224ENST00000545688 K7EMT4 169 aa1.61□□□□□ -2.15
SNHG1-224ENST00000545688 AIPO00170 330 aa1.61□□□□□ -2.15
SNHG1-224ENST00000545688 MRASO14807 208 aa1.61□□□□□ -2.15
SNHG1-224ENST00000545688 GEMIN2O14893 280 aaKnown RBP1.61□□□□□ -2.15
SNHG1-224ENST00000545688 RAB29O14966 203 aa1.61□□□□□ -2.15
SNHG1-224ENST00000545688 SULT1C4O75897 302 aa1.61□□□□□ -2.15
SNHG1-224ENST00000545688 SOX14O95416 240 aa1.61□□□□□ -2.15
SNHG1-224ENST00000545688 FUSP35637 526 aaKnown RBP eCLIP1.61□□□□□ -2.15
SNHG1-224ENST00000545688 PPP1CCP36873 323 aaKnown RBP1.61□□□□□ -2.15
SNHG1-224ENST00000545688 LGALS7P47929 136 aa1.61□□□□□ -2.15
SNHG1-224ENST00000545688 NUDT2P50583 147 aa1.61□□□□□ -2.15
SNHG1-224ENST00000545688 CMC4P56277 68 aaPredicted RBP1.61□□□□□ -2.15
SNHG1-224ENST00000545688 RBM11P57052 281 aaKnown RBP1.61□□□□□ -2.15
SNHG1-224ENST00000545688 CXCR4P61073 352 aa1.61□□□□□ -2.15
SNHG1-224ENST00000545688 VSNL1P62760 191 aa1.61□□□□□ -2.15
SNHG1-224ENST00000545688 HMGN3Q15651 99 aa1.61□□□□□ -2.15
SNHG1-224ENST00000545688 MPV17LQ2QL34 196 aa1.61□□□□□ -2.15
SNHG1-224ENST00000545688 RPL39P5Q59GN2 51 aa1.61□□□□□ -2.15
SNHG1-224ENST00000545688 SYT6Q5T7P8 510 aaPredicted RBP1.61□□□□□ -2.15
SNHG1-224ENST00000545688 LELP1Q5T871 98 aa1.61□□□□□ -2.15
SNHG1-224ENST00000545688 AADACL4Q5VUY2 407 aa1.61□□□□□ -2.15
SNHG1-224ENST00000545688 TMEM244Q5VVB8 128 aa1.61□□□□□ -2.15
SNHG1-224ENST00000545688 GLYATQ6IB77 296 aa1.61□□□□□ -2.15
SNHG1-224ENST00000545688 ZNF705AQ6ZN79 300 aaPredicted RBP1.61□□□□□ -2.15
SNHG1-224ENST00000545688 PLEKHG7Q6ZR37 379 aa1.61□□□□□ -2.15
SNHG1-224ENST00000545688 TMEM136Q6ZRR5 245 aa1.61□□□□□ -2.15
SNHG1-224ENST00000545688 Q6ZSA8 131 aa1.61□□□□□ -2.15
SNHG1-224ENST00000545688 ARPINQ7Z6K5 226 aa1.61□□□□□ -2.15
SNHG1-224ENST00000545688 PDPNQ86YL7 162 aa1.61□□□□□ -2.15
SNHG1-224ENST00000545688 OR51A4Q8NGJ6 313 aa1.61□□□□□ -2.15
SNHG1-224ENST00000545688 OR5D18Q8NGL1 313 aa1.61□□□□□ -2.15
SNHG1-224ENST00000545688 OR10J6PQ8NGY7 276 aa1.61□□□□□ -2.15
SNHG1-224ENST00000545688 OR10AC1Q8NH08 325 aa1.61□□□□□ -2.15
SNHG1-224ENST00000545688 OR5B3Q8NH48 314 aa1.61□□□□□ -2.15
SNHG1-224ENST00000545688 GRPEL2Q8TAA5 225 aa1.61□□□□□ -2.15
SNHG1-224ENST00000545688 MRPL30Q8TCC3 161 aaKnown RBP1.61□□□□□ -2.15
SNHG1-224ENST00000545688 THRSPQ92748 146 aa1.61□□□□□ -2.15
SNHG1-224ENST00000545688 PTX4Q96A99 478 aa1.61□□□□□ -2.15
SNHG1-224ENST00000545688 MRPS24Q96EL2 167 aaKnown RBP1.61□□□□□ -2.15
SNHG1-224ENST00000545688 TSNAXQ99598 290 aaKnown RBP1.61□□□□□ -2.15
SNHG1-224ENST00000545688 NIPSNAP1Q9BPW8 284 aa1.61□□□□□ -2.15
SNHG1-224ENST00000545688 HOPXQ9BPY8 73 aaPredicted RBP1.61□□□□□ -2.15
SNHG1-224ENST00000545688 UPK3BQ9BT76 320 aa1.61□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms