RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 C4orf3Q8WVX3 66 aa2.84□□□□□ -1.95
PTPN22-211ENST00000538253 KRTAP4-2Q9BYR5 136 aa2.84□□□□□ -1.95
PTPN22-211ENST00000538253 TECRQ9NZ01 308 aaKnown RBP2.84□□□□□ -1.95
PTPN22-211ENST00000538253 M0QYG6 137 aa2.84□□□□□ -1.96
PTPN22-211ENST00000538253 AVPP01185 164 aa2.84□□□□□ -1.96
PTPN22-211ENST00000538253 IFNA1P01562 189 aa2.84□□□□□ -1.96
PTPN22-211ENST00000538253 TRGV3P03979 118 aa2.84□□□□□ -1.96
PTPN22-211ENST00000538253 REG1BP48304 166 aa2.84□□□□□ -1.96
PTPN22-211ENST00000538253 CAV2P51636 162 aa2.84□□□□□ -1.96
PTPN22-211ENST00000538253 GNB1P62873 340 aa2.84□□□□□ -1.96
PTPN22-211ENST00000538253 CX3CL1P78423 397 aa2.84□□□□□ -1.96
PTPN22-211ENST00000538253 PRCDQ00LT1 54 aa2.84□□□□□ -1.96
PTPN22-211ENST00000538253 PHLDA2Q53GA4 152 aa2.84□□□□□ -1.96
PTPN22-211ENST00000538253 ZNF343Q6P1L6 599 aa2.84□□□□□ -1.96
PTPN22-211ENST00000538253 NR2C2APQ86WQ0 139 aa2.84□□□□□ -1.96
PTPN22-211ENST00000538253 TMEM217Q8N7C4 229 aa2.84□□□□□ -1.96
PTPN22-211ENST00000538253 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.84□□□□□ -1.96
PTPN22-211ENST00000538253 Q8N9W7 124 aa2.84□□□□□ -1.96
PTPN22-211ENST00000538253 ZNF114Q8NC26 417 aa2.84□□□□□ -1.96
PTPN22-211ENST00000538253 OR1B1Q8NGR6 318 aa2.84□□□□□ -1.96
PTPN22-211ENST00000538253 DDB2Q92466 427 aa2.84□□□□□ -1.96
PTPN22-211ENST00000538253 GPR82Q96P67 336 aa2.84□□□□□ -1.96
PTPN22-211ENST00000538253 RBKSQ9H477 322 aa2.84□□□□□ -1.96
PTPN22-211ENST00000538253 MRPL27Q9P0M9 148 aaKnown RBP2.84□□□□□ -1.96
PTPN22-211ENST00000538253 LAMTOR2Q9Y2Q5 125 aa2.84□□□□□ -1.96
PTPN22-211ENST00000538253 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.83□□□□□ -1.96
PTPN22-211ENST00000538253 A0A1W2PRE2 83 aa2.83□□□□□ -1.96
PTPN22-211ENST00000538253 LINC01619G3V211 115 aa2.83□□□□□ -1.96
PTPN22-211ENST00000538253 CA2P00918 260 aa2.83□□□□□ -1.96
PTPN22-211ENST00000538253 HLA-AP01891 365 aaKnown RBP2.83□□□□□ -1.96
PTPN22-211ENST00000538253 TRGC2P03986 189 aa2.83□□□□□ -1.96
PTPN22-211ENST00000538253 TYMSP04818 313 aa2.83□□□□□ -1.96
PTPN22-211ENST00000538253 LGALS1P09382 135 aaKnown RBP2.83□□□□□ -1.96
PTPN22-211ENST00000538253 SAA1P0DJI8 122 aaPredicted RBP2.83□□□□□ -1.96
PTPN22-211ENST00000538253 CD33P20138 364 aa2.83□□□□□ -1.96
PTPN22-211ENST00000538253 OR10J1P30954 320 aa2.83□□□□□ -1.96
PTPN22-211ENST00000538253 FCGR2BP31994 310 aaPredicted RBP2.83□□□□□ -1.96
PTPN22-211ENST00000538253 NKX2-1P43699 371 aaPredicted RBP2.83□□□□□ -1.96
PTPN22-211ENST00000538253 TPPP2P59282 170 aa2.83□□□□□ -1.96
PTPN22-211ENST00000538253 SRSF4Q08170 494 aaKnown RBP2.83□□□□□ -1.96
PTPN22-211ENST00000538253 RHEBQ15382 184 aa2.83□□□□□ -1.96
PTPN22-211ENST00000538253 ECSCRQ19T08 205 aa2.83□□□□□ -1.96
PTPN22-211ENST00000538253 RPL39P5Q59GN2 51 aa2.83□□□□□ -1.96
PTPN22-211ENST00000538253 IL17RELQ6ZVW7 336 aa2.83□□□□□ -1.96
PTPN22-211ENST00000538253 Q71RC1 249 aaPredicted RBP2.83□□□□□ -1.96
PTPN22-211ENST00000538253 FAM71E2Q8N5Q1 922 aa2.83□□□□□ -1.96
PTPN22-211ENST00000538253 GVQW1Q8N7I0 195 aa2.83□□□□□ -1.96
PTPN22-211ENST00000538253 STPG3Q8N7X2 389 aa2.83□□□□□ -1.96
PTPN22-211ENST00000538253 ZNF709Q8N972 641 aa2.83□□□□□ -1.96
PTPN22-211ENST00000538253 LINC01006Q8NI28 216 aa2.83□□□□□ -1.96
PTPN22-211ENST00000538253 Q8WTZ3 238 aa2.83□□□□□ -1.96
PTPN22-211ENST00000538253 FRZBQ92765 325 aa2.83□□□□□ -1.96
PTPN22-211ENST00000538253 DERL1Q9BUN8 251 aa2.83□□□□□ -1.96
PTPN22-211ENST00000538253 KCNK15Q9H427 330 aa2.83□□□□□ -1.96
PTPN22-211ENST00000538253 FBXL15Q9H469 300 aa2.83□□□□□ -1.96
PTPN22-211ENST00000538253 ZNF702PQ9H963 129 aa2.83□□□□□ -1.96
PTPN22-211ENST00000538253 MRPL16Q9NX20 251 aaKnown RBP2.83□□□□□ -1.96
PTPN22-211ENST00000538253 NAT8Q9UHE5 227 aa2.83□□□□□ -1.96
PTPN22-211ENST00000538253 RTTNQ86VV8 2226 aa2.83□□□□□ -1.96
PTPN22-211ENST00000538253 IGKV1-6A0A0C4DH72 117 aa2.83□□□□□ -1.96
PTPN22-211ENST00000538253 C17orf112F2Z3M2 114 aa2.83□□□□□ -1.96
PTPN22-211ENST00000538253 MPDU1O75352 247 aa2.83□□□□□ -1.96
PTPN22-211ENST00000538253 BTCP35070 178 aa2.83□□□□□ -1.96
PTPN22-211ENST00000538253 RNASE12Q5GAN4 147 aaKnown RBP2.83□□□□□ -1.96
PTPN22-211ENST00000538253 FFAR4Q5NUL3 377 aa2.83□□□□□ -1.96
PTPN22-211ENST00000538253 ZNF818PQ6ZRF7 136 aa2.83□□□□□ -1.96
PTPN22-211ENST00000538253 C1orf229Q6ZS94 237 aaPredicted RBP2.83□□□□□ -1.96
PTPN22-211ENST00000538253 BCL6BQ8N143 479 aaPredicted RBP2.83□□□□□ -1.96
PTPN22-211ENST00000538253 FGFRL1Q8N441 504 aa2.83□□□□□ -1.96
PTPN22-211ENST00000538253 PHYHIPLQ96FC7 376 aa2.83□□□□□ -1.96
PTPN22-211ENST00000538253 C2orf50Q96LR7 162 aa2.83□□□□□ -1.96
PTPN22-211ENST00000538253 WNT10AQ9GZT5 417 aa2.83□□□□□ -1.96
PTPN22-211ENST00000538253 SRD5A3Q9H8P0 318 aa2.83□□□□□ -1.96
PTPN22-211ENST00000538253 ZNF586Q9NXT0 402 aa2.83□□□□□ -1.96
PTPN22-211ENST00000538253 KLK11Q9UBX7 282 aa2.83□□□□□ -1.96
PTPN22-211ENST00000538253 CCDC168Q8NDH2 2452 aa2.83□□□□□ -1.96
PTPN22-211ENST00000538253 FXYD6-FXYD2A0A087WZ82 144 aa2.82□□□□□ -1.96
PTPN22-211ENST00000538253 GAGE12HA6NDE8 117 aa2.82□□□□□ -1.96
PTPN22-211ENST00000538253 H7BYZ3 331 aa2.82□□□□□ -1.96
PTPN22-211ENST00000538253 TMEM50AO95807 157 aa2.82□□□□□ -1.96
PTPN22-211ENST00000538253 KRASP01116 189 aa2.82□□□□□ -1.96
PTPN22-211ENST00000538253 GIPP09681 153 aaPredicted RBP2.82□□□□□ -1.96
PTPN22-211ENST00000538253 HIST1H1EP10412 219 aaKnown RBP2.82□□□□□ -1.96
PTPN22-211ENST00000538253 PROK1P58294 105 aa2.82□□□□□ -1.96
PTPN22-211ENST00000538253 RAP2BP61225 183 aa2.82□□□□□ -1.96
PTPN22-211ENST00000538253 HSD52Q0P140 79 aa2.82□□□□□ -1.96
PTPN22-211ENST00000538253 PJVKQ0ZLH3 352 aa2.82□□□□□ -1.96
PTPN22-211ENST00000538253 RPEL1Q2QD12 228 aa2.82□□□□□ -1.96
PTPN22-211ENST00000538253 KLK9Q2XQG4 91 aa2.82□□□□□ -1.96
PTPN22-211ENST00000538253 CD300EQ496F6 205 aaPredicted RBP2.82□□□□□ -1.96
PTPN22-211ENST00000538253 C2orf83Q53S99 150 aa2.82□□□□□ -1.96
PTPN22-211ENST00000538253 AMMECR1LQ6DCA0 310 aa2.82□□□□□ -1.96
PTPN22-211ENST00000538253 DYNLRB2Q8TF09 96 aa2.82□□□□□ -1.96
PTPN22-211ENST00000538253 UHRF2Q96PU4 802 aa2.82□□□□□ -1.96
PTPN22-211ENST00000538253 PSMG3Q9BT73 122 aaPredicted RBP2.82□□□□□ -1.96
PTPN22-211ENST00000538253 TNFRSF19Q9NS68 423 aa2.82□□□□□ -1.96
PTPN22-211ENST00000538253 KLK9Q9UKQ9 250 aa2.82□□□□□ -1.96
PTPN22-211ENST00000538253 WSB1Q9Y6I7 421 aa2.82□□□□□ -1.96
PTPN22-211ENST00000538253 BORCS7-ASMTA0A0B4J1R7 106 aa2.82□□□□□ -1.96
PTPN22-211ENST00000538253 MEIS3P1A6NDR6 274 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms