RNA–Protein interactions for RNA: ENST00000535941.5

COL21A1-212, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL21A1, Length 3,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-212ENST00000535941 CRISP2P16562 243 aa6.34□□□□□ -1.39
COL21A1-212ENST00000535941 CRYBA4P53673 196 aa6.34□□□□□ -1.39
COL21A1-212ENST00000535941 RPL23P62829 140 aaKnown RBP6.34□□□□□ -1.39
COL21A1-212ENST00000535941 VMA21Q3ZAQ7 101 aa6.34□□□□□ -1.39
COL21A1-212ENST00000535941 SAMD13Q5VXD3 122 aa6.34□□□□□ -1.39
COL21A1-212ENST00000535941 OR10W1Q8NGF6 305 aa6.34□□□□□ -1.39
COL21A1-212ENST00000535941 PIFOQ8TCI5 191 aa6.34□□□□□ -1.39
COL21A1-212ENST00000535941 FNDC4Q9H6D8 234 aaPredicted RBP6.34□□□□□ -1.39
COL21A1-212ENST00000535941 PLEKHA3Q9HB20 300 aa6.34□□□□□ -1.39
COL21A1-212ENST00000535941 NPVFQ9HCQ7 196 aa6.34□□□□□ -1.39
COL21A1-212ENST00000535941 ONECUT1Q9UBC0 465 aa6.34□□□□□ -1.39
COL21A1-212ENST00000535941 SERF1AO75920 110 aa6.34□□□□□ -1.4
COL21A1-212ENST00000535941 SRP14P37108 136 aaKnown RBP6.34□□□□□ -1.4
COL21A1-212ENST00000535941 PIMREGQ9BSJ6 248 aa6.34□□□□□ -1.4
COL21A1-212ENST00000535941 PARLQ9H300 379 aa6.34□□□□□ -1.4
COL21A1-212ENST00000535941 CENPVL3A0A0U1RRI6 287 aa6.33□□□□□ -1.4
COL21A1-212ENST00000535941 CTXND1A0A1B0GTU2 59 aa6.33□□□□□ -1.4
COL21A1-212ENST00000535941 PLP1P60201 277 aa6.33□□□□□ -1.4
COL21A1-212ENST00000535941 SMAGPQ0VAQ4 97 aa6.33□□□□□ -1.4
COL21A1-212ENST00000535941 FFAR4Q5NUL3 377 aa6.33□□□□□ -1.4
COL21A1-212ENST00000535941 PPP1R27Q86WC6 154 aa6.33□□□□□ -1.4
COL21A1-212ENST00000535941 NIT1Q86X76 327 aa6.33□□□□□ -1.4
COL21A1-212ENST00000535941 TMEM116Q8NCL8 245 aa6.33□□□□□ -1.4
COL21A1-212ENST00000535941 ZNF580Q9UK33 172 aa6.33□□□□□ -1.4
COL21A1-212ENST00000535941 COL12A1Q99715 3063 aa6.33□□□□□ -1.4
COL21A1-212ENST00000535941 CELSR1Q9NYQ6 3014 aa6.33□□□□□ -1.4
COL21A1-212ENST00000535941 ICE1Q9Y2F5 2266 aa6.33□□□□□ -1.4
COL21A1-212ENST00000535941 NPIPB5A8MRT5 1133 aa6.33□□□□□ -1.4
COL21A1-212ENST00000535941 I3L2K1 104 aa6.33□□□□□ -1.4
COL21A1-212ENST00000535941 MOSP00540 346 aa6.33□□□□□ -1.4
COL21A1-212ENST00000535941 IGLC2P0DOY2 106 aa6.33□□□□□ -1.4
COL21A1-212ENST00000535941 IGLC3P0DOY3 106 aa6.33□□□□□ -1.4
COL21A1-212ENST00000535941 CD99P14209 185 aa6.33□□□□□ -1.4
COL21A1-212ENST00000535941 FCGR2BP31994 310 aaPredicted RBP6.33□□□□□ -1.4
COL21A1-212ENST00000535941 ARF6P62330 175 aa6.33□□□□□ -1.4
COL21A1-212ENST00000535941 LCN2P80188 198 aa6.33□□□□□ -1.4
COL21A1-212ENST00000535941 PIP4P2Q8N4L2 257 aa6.33□□□□□ -1.4
COL21A1-212ENST00000535941 OR4F5Q8NH21 305 aa6.33□□□□□ -1.4
COL21A1-212ENST00000535941 OR4F4Q96R69 305 aa6.33□□□□□ -1.4
COL21A1-212ENST00000535941 PRRC2AP48634 2157 aaKnown RBP6.33□□□□□ -1.4
COL21A1-212ENST00000535941 IGHV4-30-2A0A087WSY4 118 aa6.32□□□□□ -1.4
COL21A1-212ENST00000535941 NBR2O15453 112 aa6.32□□□□□ -1.4
COL21A1-212ENST00000535941 RBMXL2O75526 392 aaKnown RBP6.32□□□□□ -1.4
COL21A1-212ENST00000535941 STAG3L2P0CL84 134 aa6.32□□□□□ -1.4
COL21A1-212ENST00000535941 PSMB3P49720 205 aa6.32□□□□□ -1.4
COL21A1-212ENST00000535941 MEF2BQ02080 365 aaPredicted RBP6.32□□□□□ -1.4
COL21A1-212ENST00000535941 ZC2HC1AQ96GY0 325 aa6.32□□□□□ -1.4
COL21A1-212ENST00000535941 EAF1Q96JC9 268 aaPredicted RBP6.32□□□□□ -1.4
COL21A1-212ENST00000535941 SLC39A9Q9NUM3 307 aa6.32□□□□□ -1.4
COL21A1-212ENST00000535941 F11RQ9Y624 299 aaKnown RBP6.32□□□□□ -1.4
COL21A1-212ENST00000535941 USP9XQ93008 2570 aaPredicted RBP6.32□□□□□ -1.4
COL21A1-212ENST00000535941 C17orf112F2Z3M2 114 aa6.32□□□□□ -1.4
COL21A1-212ENST00000535941 TYMSP04818 313 aa6.32□□□□□ -1.4
COL21A1-212ENST00000535941 ADMP35318 185 aa6.32□□□□□ -1.4
COL21A1-212ENST00000535941 TTC9CQ8N5M4 171 aa6.32□□□□□ -1.4
COL21A1-212ENST00000535941 FAM168AQ92567 244 aa6.32□□□□□ -1.4
COL21A1-212ENST00000535941 BEX4Q9NWD9 120 aaPredicted RBP6.32□□□□□ -1.4
COL21A1-212ENST00000535941 MRPL36Q9P0J6 103 aaKnown RBP6.32□□□□□ -1.4
COL21A1-212ENST00000535941 F8W735 103 aaPredicted RBP6.32□□□□□ -1.4
COL21A1-212ENST00000535941 CNIH1O95406 144 aa6.32□□□□□ -1.4
COL21A1-212ENST00000535941 HLA-DRB1P01911 266 aa6.32□□□□□ -1.4
COL21A1-212ENST00000535941 TSPOP30536 169 aa6.32□□□□□ -1.4
COL21A1-212ENST00000535941 AMTP48728 403 aa6.32□□□□□ -1.4
COL21A1-212ENST00000535941 C10orf55Q5SWW7 151 aa6.32□□□□□ -1.4
COL21A1-212ENST00000535941 CCDC144NLQ6NUI1 221 aa6.32□□□□□ -1.4
COL21A1-212ENST00000535941 ATOH7Q8N100 152 aa6.32□□□□□ -1.4
COL21A1-212ENST00000535941 Q8N9W7 124 aa6.32□□□□□ -1.4
COL21A1-212ENST00000535941 RPEQ96AT9 228 aa6.32□□□□□ -1.4
COL21A1-212ENST00000535941 ZNF503Q96F45 646 aa6.32□□□□□ -1.4
COL21A1-212ENST00000535941 WNT10AQ9GZT5 417 aa6.32□□□□□ -1.4
COL21A1-212ENST00000535941 HEYLQ9NQ87 328 aaPredicted RBP6.32□□□□□ -1.4
COL21A1-212ENST00000535941 A0A1B0GV72 72 aa6.31□□□□□ -1.4
COL21A1-212ENST00000535941 HMGB3O15347 200 aaKnown RBP6.31□□□□□ -1.4
COL21A1-212ENST00000535941 PLA2G2AP14555 144 aa6.31□□□□□ -1.4
COL21A1-212ENST00000535941 SLC25A16P16260 332 aa6.31□□□□□ -1.4
COL21A1-212ENST00000535941 PMCHP20382 165 aa6.31□□□□□ -1.4
COL21A1-212ENST00000535941 RPS16P62249 146 aaKnown RBP6.31□□□□□ -1.4
COL21A1-212ENST00000535941 C5orf64Q2M2E5 130 aa6.31□□□□□ -1.4
COL21A1-212ENST00000535941 TEPPQ6URK8 271 aa6.31□□□□□ -1.4
COL21A1-212ENST00000535941 C9orf139Q6ZV77 190 aa6.31□□□□□ -1.4
COL21A1-212ENST00000535941 OR1N2Q8NGR9 330 aa6.31□□□□□ -1.4
COL21A1-212ENST00000535941 GTSF1LQ9H1H1 148 aa6.31□□□□□ -1.4
COL21A1-212ENST00000535941 PXMP4Q9Y6I8 212 aa6.31□□□□□ -1.4
COL21A1-212ENST00000535941 FCN1O00602 326 aa6.31□□□□□ -1.4
COL21A1-212ENST00000535941 TRGV9Q99603 122 aa6.31□□□□□ -1.4
COL21A1-212ENST00000535941 C19orf24Q9BVV8 132 aa6.31□□□□□ -1.4
COL21A1-212ENST00000535941 KCNIP2Q9NS61 270 aa6.31□□□□□ -1.4
COL21A1-212ENST00000535941 TNCP24821 2201 aa6.31□□□□□ -1.4
COL21A1-212ENST00000535941 A0A1B0GW15 77 aa6.31□□□□□ -1.4
COL21A1-212ENST00000535941 GAGE12BA1L429 117 aa6.31□□□□□ -1.4
COL21A1-212ENST00000535941 OR7C2O60412 319 aa6.31□□□□□ -1.4
COL21A1-212ENST00000535941 AREGP15514 252 aa6.31□□□□□ -1.4
COL21A1-212ENST00000535941 COX7A1P24310 79 aa6.31□□□□□ -1.4
COL21A1-212ENST00000535941 RAB9AP51151 201 aa6.31□□□□□ -1.4
COL21A1-212ENST00000535941 LOXL1Q08397 574 aaPredicted RBP6.31□□□□□ -1.4
COL21A1-212ENST00000535941 BOD1L2Q8IYS8 172 aa6.31□□□□□ -1.4
COL21A1-212ENST00000535941 STPG3Q8N7X2 389 aa6.31□□□□□ -1.4
COL21A1-212ENST00000535941 SGMS2Q8NHU3 365 aa6.31□□□□□ -1.4
COL21A1-212ENST00000535941 PSMG3-AS1Q96PY0 264 aa6.31□□□□□ -1.4
COL21A1-212ENST00000535941 FBXL7Q9UJT9 491 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms