RNA–Protein interactions for RNA: ENST00000533667.5

CTNND1-236, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-236ENST00000533667 IGKV1-27A0A075B6S5 117 aa5.78□□□□□ -1.48
CTNND1-236ENST00000533667 IGHV2-5P01817 119 aa5.78□□□□□ -1.48
CTNND1-236ENST00000533667 CLPSP04118 112 aa5.78□□□□□ -1.48
CTNND1-236ENST00000533667 ZNF479Q96JC4 524 aa5.78□□□□□ -1.48
CTNND1-236ENST00000533667 JMJD8Q96S16 334 aa5.78□□□□□ -1.48
CTNND1-236ENST00000533667 SPANXB1Q9NS25 103 aaPredicted RBP5.78□□□□□ -1.48
CTNND1-236ENST00000533667 MRPL27Q9P0M9 148 aaKnown RBP5.78□□□□□ -1.48
CTNND1-236ENST00000533667 APC2O95996 2303 aa5.78□□□□□ -1.48
CTNND1-236ENST00000533667 ICE1Q9Y2F5 2266 aa5.78□□□□□ -1.48
CTNND1-236ENST00000533667 TRGV2A0A075B6R0 118 aa5.78□□□□□ -1.48
CTNND1-236ENST00000533667 MUC21A0A0G2JKD1 596 aa5.78□□□□□ -1.48
CTNND1-236ENST00000533667 MUC21A0A140T8X8 626 aa5.78□□□□□ -1.48
CTNND1-236ENST00000533667 PINLYPA6NC86 204 aa5.78□□□□□ -1.48
CTNND1-236ENST00000533667 WNT2P09544 360 aa5.78□□□□□ -1.48
CTNND1-236ENST00000533667 PAX8Q06710 450 aa5.78□□□□□ -1.48
CTNND1-236ENST00000533667 ACTL10Q5JWF8 245 aa5.78□□□□□ -1.48
CTNND1-236ENST00000533667 MUC21Q5SSG8 566 aa5.78□□□□□ -1.48
CTNND1-236ENST00000533667 SRSF8Q9BRL6 282 aaKnown RBP5.78□□□□□ -1.48
CTNND1-236ENST00000533667 NHP2Q9NX24 153 aaKnown RBP5.78□□□□□ -1.48
CTNND1-236ENST00000533667 TRAV26-1A0A087WT03 109 aa5.77□□□□□ -1.49
CTNND1-236ENST00000533667 IGKV1-5P01602 117 aa5.77□□□□□ -1.49
CTNND1-236ENST00000533667 CXCL1P09341 107 aa5.77□□□□□ -1.49
CTNND1-236ENST00000533667 CEACAM8P31997 349 aaPredicted RBP5.77□□□□□ -1.49
CTNND1-236ENST00000533667 VDAC2P45880 294 aaPredicted RBP5.77□□□□□ -1.49
CTNND1-236ENST00000533667 SLC25A39Q9BZJ4 359 aaPredicted RBP5.77□□□□□ -1.49
CTNND1-236ENST00000533667 KLF12Q9Y4X4 402 aa5.77□□□□□ -1.49
CTNND1-236ENST00000533667 IGHV2-26A0A0B4J1V2 119 aa5.77□□□□□ -1.49
CTNND1-236ENST00000533667 F8W1H4 67 aa5.77□□□□□ -1.49
CTNND1-236ENST00000533667 LAGE3Q14657 143 aa5.77□□□□□ -1.49
CTNND1-236ENST00000533667 ADAMTSL5Q6ZMM2 481 aa5.77□□□□□ -1.49
CTNND1-236ENST00000533667 RPP25LQ8N5L8 163 aaKnown RBP5.77□□□□□ -1.49
CTNND1-236ENST00000533667 KIR3DL3Q8N743 410 aa5.77□□□□□ -1.49
CTNND1-236ENST00000533667 GREB1Q4ZG55 1949 aa5.77□□□□□ -1.49
CTNND1-236ENST00000533667 TCRAP04437 139 aa5.77□□□□□ -1.49
CTNND1-236ENST00000533667 IGHV1-8P0DP01 117 aa5.77□□□□□ -1.49
CTNND1-236ENST00000533667 SIGLEC15Q6ZMC9 328 aa5.77□□□□□ -1.49
CTNND1-236ENST00000533667 STHQ8IWL8 128 aa5.77□□□□□ -1.49
CTNND1-236ENST00000533667 PRDM6Q9NQX0 595 aa5.77□□□□□ -1.49
CTNND1-236ENST00000533667 SLC25A20O43772 301 aa5.77□□□□□ -1.49
CTNND1-236ENST00000533667 TRACP01848 142 aa5.77□□□□□ -1.49
CTNND1-236ENST00000533667 GAGE2AQ6NT46 116 aa5.77□□□□□ -1.49
CTNND1-236ENST00000533667 C1orf122Q6ZSJ8 110 aa5.77□□□□□ -1.49
CTNND1-236ENST00000533667 C9orf139Q6ZV77 190 aa5.77□□□□□ -1.49
CTNND1-236ENST00000533667 RNASE8Q8TDE3 154 aaKnown RBP5.77□□□□□ -1.49
CTNND1-236ENST00000533667 ALPK2Q86TB3 2170 aa5.76□□□□□ -1.49
CTNND1-236ENST00000533667 IGHV3-11P01762 117 aa5.76□□□□□ -1.49
CTNND1-236ENST00000533667 MESP1Q9BRJ9 268 aa5.76□□□□□ -1.49
CTNND1-236ENST00000533667 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.76□□□□□ -1.49
CTNND1-236ENST00000533667 TRAV41A0A0B4J266 112 aa5.76□□□□□ -1.49
CTNND1-236ENST00000533667 ZNF815PA8K554 130 aa5.76□□□□□ -1.49
CTNND1-236ENST00000533667 M0R1W7 72 aa5.76□□□□□ -1.49
CTNND1-236ENST00000533667 RPRMLQ8N4K4 120 aa5.76□□□□□ -1.49
CTNND1-236ENST00000533667 EDA2RQ9HAV5 297 aa5.76□□□□□ -1.49
CTNND1-236ENST00000533667 TOMM7Q9P0U1 55 aa5.76□□□□□ -1.49
CTNND1-236ENST00000533667 SLC25A15Q9Y619 301 aa5.76□□□□□ -1.49
CTNND1-236ENST00000533667 RALGAPA1Q6GYQ0 2036 aa5.76□□□□□ -1.49
CTNND1-236ENST00000533667 ASXL3Q9C0F0 2248 aa5.76□□□□□ -1.49
CTNND1-236ENST00000533667 CASP8AP2Q9UKL3 1982 aa5.76□□□□□ -1.49
CTNND1-236ENST00000533667 IGHV2-70DA0A0C4DH43 119 aa5.76□□□□□ -1.49
CTNND1-236ENST00000533667 TMEM178BH3BS89 294 aa5.76□□□□□ -1.49
CTNND1-236ENST00000533667 PSPNO60542 156 aa5.76□□□□□ -1.49
CTNND1-236ENST00000533667 Q6P435 159 aa5.76□□□□□ -1.49
CTNND1-236ENST00000533667 TMEM105Q8N8V8 129 aa5.76□□□□□ -1.49
CTNND1-236ENST00000533667 DOCK6Q96HP0 2047 aa5.76□□□□□ -1.49
CTNND1-236ENST00000533667 KIF26BQ2KJY2 2108 aa5.76□□□□□ -1.49
CTNND1-236ENST00000533667 TCTEX1D4Q5JR98 221 aa5.76□□□□□ -1.49
CTNND1-236ENST00000533667 DMRTC2Q8IXT2 367 aaPredicted RBP5.76□□□□□ -1.49
CTNND1-236ENST00000533667 IGHV3OR16-8A0A075B7F1 116 aa5.75□□□□□ -1.49
CTNND1-236ENST00000533667 TRBV7-1A0A0A6YYK4 115 aa5.75□□□□□ -1.49
CTNND1-236ENST00000533667 IGHV1-3A0A0C4DH29 117 aa5.75□□□□□ -1.49
CTNND1-236ENST00000533667 MLNRO43193 412 aa5.75□□□□□ -1.49
CTNND1-236ENST00000533667 CD28P10747 220 aa5.75□□□□□ -1.49
CTNND1-236ENST00000533667 CDKN1AP38936 164 aa5.75□□□□□ -1.49
CTNND1-236ENST00000533667 PLEKHB2Q96CS7 222 aa5.75□□□□□ -1.49
CTNND1-236ENST00000533667 LINC00477Q96M19 166 aa5.75□□□□□ -1.49
CTNND1-236ENST00000533667 CD59P13987 128 aa5.75□□□□□ -1.49
CTNND1-236ENST00000533667 PSG3Q16557 428 aa5.75□□□□□ -1.49
CTNND1-236ENST00000533667 ZNF672Q499Z4 452 aaPredicted RBP5.75□□□□□ -1.49
CTNND1-236ENST00000533667 TMEM200BQ69YZ2 307 aa5.75□□□□□ -1.49
CTNND1-236ENST00000533667 DTX2Q86UW9 622 aa5.75□□□□□ -1.49
CTNND1-236ENST00000533667 DTX1Q86Y01 620 aa5.75□□□□□ -1.49
CTNND1-236ENST00000533667 CD177Q8N6Q3 437 aa5.75□□□□□ -1.49
CTNND1-236ENST00000533667 GFRA4Q9GZZ7 299 aa5.75□□□□□ -1.49
CTNND1-236ENST00000533667 TET1Q8NFU7 2136 aa5.75□□□□□ -1.49
CTNND1-236ENST00000533667 H0YJW9 148 aa5.75□□□□□ -1.49
CTNND1-236ENST00000533667 K7EP34 96 aa5.75□□□□□ -1.49
CTNND1-236ENST00000533667 EFNA4P52798 201 aa5.75□□□□□ -1.49
CTNND1-236ENST00000533667 GFI1BQ5VTD9 330 aa5.75□□□□□ -1.49
CTNND1-236ENST00000533667 PMS2P5A8MQ11 134 aa5.75□□□□□ -1.49
CTNND1-236ENST00000533667 ZNF138P52744 262 aa5.75□□□□□ -1.49
CTNND1-236ENST00000533667 TMEM86BQ8N661 226 aa5.75□□□□□ -1.49
CTNND1-236ENST00000533667 MDS2Q8NDY4 140 aa5.75□□□□□ -1.49
CTNND1-236ENST00000533667 MBD3L4A6NDZ8 208 aaPredicted RBP5.74□□□□□ -1.49
CTNND1-236ENST00000533667 MBD3L3A6NE82 208 aaPredicted RBP5.74□□□□□ -1.49
CTNND1-236ENST00000533667 MBD3L5A6NJ08 208 aaPredicted RBP5.74□□□□□ -1.49
CTNND1-236ENST00000533667 MALP21145 153 aa5.74□□□□□ -1.49
CTNND1-236ENST00000533667 ATXN8Q156A1 80 aa5.74□□□□□ -1.49
CTNND1-236ENST00000533667 MBD3L2Q8NHZ7 208 aaPredicted RBP5.74□□□□□ -1.49
CTNND1-236ENST00000533667 C22orf46C9J442 243 aa5.74□□□□□ -1.49
CTNND1-236ENST00000533667 SPATA31B1PQ5VZV4 182 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms