RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 HOXA5P20719 270 aa9.2□□□□□ -0.94
PTPRK-221ENST00000532331 CACNG7P62955 275 aa9.2□□□□□ -0.94
PTPRK-221ENST00000532331 TREML4Q6UXN2 200 aa9.2□□□□□ -0.94
PTPRK-221ENST00000532331 SIGLEC9Q9Y336 463 aa9.2□□□□□ -0.94
PTPRK-221ENST00000532331 TRGV11A0A075B6L2 103 aa9.2□□□□□ -0.94
PTPRK-221ENST00000532331 A0A1W2PNU3 283 aaPredicted RBP9.2□□□□□ -0.94
PTPRK-221ENST00000532331 TCF23Q7RTU1 214 aa9.2□□□□□ -0.94
PTPRK-221ENST00000532331 ST20Q9HBF5 79 aa9.2□□□□□ -0.94
PTPRK-221ENST00000532331 WFDC1Q9HC57 220 aa9.2□□□□□ -0.94
PTPRK-221ENST00000532331 BDP1A6H8Y1 2624 aa9.2□□□□□ -0.94
PTPRK-221ENST00000532331 SHISA9B4DS77 424 aa9.2□□□□□ -0.94
PTPRK-221ENST00000532331 TMEM190Q8WZ59 177 aa9.2□□□□□ -0.94
PTPRK-221ENST00000532331 C1QTNF4Q9BXJ3 329 aa9.2□□□□□ -0.94
PTPRK-221ENST00000532331 LTBP2Q14767 1821 aa9.19□□□□□ -0.94
PTPRK-221ENST00000532331 USF3Q68DE3 2245 aa9.19□□□□□ -0.94
PTPRK-221ENST00000532331 FBLN7Q53RD9 439 aa9.19□□□□□ -0.94
PTPRK-221ENST00000532331 C1orf122Q6ZSJ8 110 aa9.19□□□□□ -0.94
PTPRK-221ENST00000532331 PRDM13Q9H4Q3 707 aa9.19□□□□□ -0.94
PTPRK-221ENST00000532331 HOXA3O43365 443 aaPredicted RBP9.19□□□□□ -0.94
PTPRK-221ENST00000532331 DNAL4O96015 105 aa9.19□□□□□ -0.94
PTPRK-221ENST00000532331 LHFPL4Q7Z7J7 247 aa9.19□□□□□ -0.94
PTPRK-221ENST00000532331 LINC01619G3V211 115 aa9.19□□□□□ -0.94
PTPRK-221ENST00000532331 PLP1P60201 277 aa9.19□□□□□ -0.94
PTPRK-221ENST00000532331 MBD3L1Q8WWY6 194 aa9.19□□□□□ -0.94
PTPRK-221ENST00000532331 CACNA1DQ01668 2161 aa9.19□□□□□ -0.94
PTPRK-221ENST00000532331 KLF17Q5JT82 389 aaPredicted RBP9.18□□□□□ -0.94
PTPRK-221ENST00000532331 Q6ZR03 302 aa9.18□□□□□ -0.94
PTPRK-221ENST00000532331 A0A1B0GWJ7 208 aa9.18□□□□□ -0.94
PTPRK-221ENST00000532331 NDUFS7O75251 213 aa9.18□□□□□ -0.94
PTPRK-221ENST00000532331 SMIM13P0DJ93 91 aa9.18□□□□□ -0.94
PTPRK-221ENST00000532331 SYNJ2BPP57105 145 aa9.18□□□□□ -0.94
PTPRK-221ENST00000532331 LCN12Q6JVE5 192 aa9.18□□□□□ -0.94
PTPRK-221ENST00000532331 ROS1P08922 2347 aa9.18□□□□□ -0.94
PTPRK-221ENST00000532331 IGLV3-9A0A075B6K5 115 aa9.18□□□□□ -0.94
PTPRK-221ENST00000532331 SCGB1A1P11684 91 aa9.18□□□□□ -0.94
PTPRK-221ENST00000532331 TTC9CQ8N5M4 171 aa9.18□□□□□ -0.94
PTPRK-221ENST00000532331 GGTLC1Q9BX51 225 aa9.18□□□□□ -0.94
PTPRK-221ENST00000532331 DMRT1Q9Y5R6 373 aa9.18□□□□□ -0.94
PTPRK-221ENST00000532331 CFAP161Q6P656 301 aa9.18□□□□□ -0.94
PTPRK-221ENST00000532331 WFDC12Q8WWY7 111 aa9.18□□□□□ -0.94
PTPRK-221ENST00000532331 HS3ST6Q96QI5 342 aa9.18□□□□□ -0.94
PTPRK-221ENST00000532331 TOMM7Q9P0U1 55 aa9.18□□□□□ -0.94
PTPRK-221ENST00000532331 PLXNA2O75051 1894 aa9.18□□□□□ -0.94
PTPRK-221ENST00000532331 VGLL1Q99990 258 aa9.18□□□□□ -0.94
PTPRK-221ENST00000532331 SUPT4H1P63272 117 aaKnown RBP9.17□□□□□ -0.94
PTPRK-221ENST00000532331 TRAV5A0A0B4J249 113 aa9.17□□□□□ -0.94
PTPRK-221ENST00000532331 FGF16O43320 207 aa9.17□□□□□ -0.94
PTPRK-221ENST00000532331 ZNF688P0C7X2 276 aa9.17□□□□□ -0.94
PTPRK-221ENST00000532331 PSG1P11464 419 aa9.17□□□□□ -0.94
PTPRK-221ENST00000532331 DAZAP2Q15038 168 aaPredicted RBP9.17□□□□□ -0.94
PTPRK-221ENST00000532331 IFI27P40305 119 aaPredicted RBP9.17□□□□□ -0.94
PTPRK-221ENST00000532331 ACTL10Q5JWF8 245 aa9.17□□□□□ -0.94
PTPRK-221ENST00000532331 KIR3DL3Q8N743 410 aa9.17□□□□□ -0.94
PTPRK-221ENST00000532331 TRGV9Q99603 122 aa9.17□□□□□ -0.94
PTPRK-221ENST00000532331 F2Z2F3 143 aa9.17□□□□□ -0.94
PTPRK-221ENST00000532331 PPBPP02775 128 aa9.17□□□□□ -0.94
PTPRK-221ENST00000532331 TMEM249Q2WGJ8 235 aa9.17□□□□□ -0.94
PTPRK-221ENST00000532331 OCC1Q8TAD7 63 aa9.17□□□□□ -0.94
PTPRK-221ENST00000532331 VSIRQ9H7M9 311 aa9.17□□□□□ -0.94
PTPRK-221ENST00000532331 ZNF407Q9C0G0 2248 aa9.16□□□□□ -0.94
PTPRK-221ENST00000532331 IGKV1-5P01602 117 aa9.16□□□□□ -0.94
PTPRK-221ENST00000532331 NMSQ5H8A3 153 aa9.16□□□□□ -0.94
PTPRK-221ENST00000532331 VCX2Q9H322 139 aa9.16□□□□□ -0.94
PTPRK-221ENST00000532331 IGHV2-5P01817 119 aa9.16□□□□□ -0.94
PTPRK-221ENST00000532331 CRPP02741 224 aa9.16□□□□□ -0.94
PTPRK-221ENST00000532331 STAG3L3P0CL85 134 aa9.16□□□□□ -0.94
PTPRK-221ENST00000532331 ZNF415Q09FC8 603 aa9.16□□□□□ -0.94
PTPRK-221ENST00000532331 SPRY4Q9C004 299 aa9.16□□□□□ -0.94
PTPRK-221ENST00000532331 CNTFRP26992 372 aa9.16□□□□□ -0.94
PTPRK-221ENST00000532331 COTL1Q14019 142 aa9.16□□□□□ -0.94
PTPRK-221ENST00000532331 TEX36Q5VZQ5 186 aa9.16□□□□□ -0.94
PTPRK-221ENST00000532331 SLC25A39Q9BZJ4 359 aaPredicted RBP9.16□□□□□ -0.94
PTPRK-221ENST00000532331 PMS2P5A8MQ11 134 aa9.16□□□□□ -0.94
PTPRK-221ENST00000532331 LOXP28300 417 aaPredicted RBP9.16□□□□□ -0.94
PTPRK-221ENST00000532331 QRFPP83859 136 aa9.16□□□□□ -0.94
PTPRK-221ENST00000532331 SRSF1Q07955 248 aaKnown RBP eCLIP9.16□□□□□ -0.94
PTPRK-221ENST00000532331 FAM19A2Q8N3H0 131 aa9.16□□□□□ -0.94
PTPRK-221ENST00000532331 NRGNQ92686 78 aa9.16□□□□□ -0.94
PTPRK-221ENST00000532331 SSBP4Q9BWG4 385 aaPredicted RBP9.16□□□□□ -0.94
PTPRK-221ENST00000532331 TRAV3A0A0B4J244 114 aa9.16□□□□□ -0.94
PTPRK-221ENST00000532331 ATP6V0E1O15342 81 aa9.16□□□□□ -0.94
PTPRK-221ENST00000532331 RPL15P61313 204 aaKnown RBP9.16□□□□□ -0.94
PTPRK-221ENST00000532331 Q6ZS49 121 aa9.16□□□□□ -0.94
PTPRK-221ENST00000532331 LINC00518Q8N0U6 118 aa9.16□□□□□ -0.94
PTPRK-221ENST00000532331 KIF26AQ9ULI4 1882 aaPredicted RBP9.15□□□□□ -0.94
PTPRK-221ENST00000532331 IGHV4-30-2A0A087WSY4 118 aa9.15□□□□□ -0.94
PTPRK-221ENST00000532331 ZNF503-AS2A6NEH8 195 aa9.15□□□□□ -0.94
PTPRK-221ENST00000532331 OVOL3O00110 214 aa9.15□□□□□ -0.94
PTPRK-221ENST00000532331 NDUFA3O95167 84 aa9.15□□□□□ -0.94
PTPRK-221ENST00000532331 NDPQ00604 133 aa9.15□□□□□ -0.94
PTPRK-221ENST00000532331 OR9G4Q8NGQ1 327 aa9.15□□□□□ -0.94
PTPRK-221ENST00000532331 NXT2Q9NPJ8 142 aaKnown RBP9.15□□□□□ -0.94
PTPRK-221ENST00000532331 DAZ1Q9NQZ3 744 aaKnown RBP9.15□□□□□ -0.94
PTPRK-221ENST00000532331 TMEM170AQ8WVE7 144 aa9.15□□□□□ -0.94
PTPRK-221ENST00000532331 PPIFP30405 207 aaKnown RBP9.15□□□□□ -0.94
PTPRK-221ENST00000532331 TDGF1P3P51864 188 aa9.15□□□□□ -0.94
PTPRK-221ENST00000532331 ZNF562Q6V9R5 426 aa9.15□□□□□ -0.94
PTPRK-221ENST00000532331 TSKUQ8WUA8 353 aa9.15□□□□□ -0.94
PTPRK-221ENST00000532331 RHPN1-AS1Q9BWJ2 59 aa9.15□□□□□ -0.94
PTPRK-221ENST00000532331 C2orf16Q68DN1 1984 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms