RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 C22orf42Q6IC83 251 aa4.69□□□□□ -1.66
CSDE1-213ENST00000530784 Q6ZVH6 145 aa4.69□□□□□ -1.66
CSDE1-213ENST00000530784 OR13F1Q8NGS4 319 aa4.69□□□□□ -1.66
CSDE1-213ENST00000530784 ZNF502Q8TBZ5 544 aa4.69□□□□□ -1.66
CSDE1-213ENST00000530784 NDUFAF3Q9BU61 184 aa4.69□□□□□ -1.66
CSDE1-213ENST00000530784 COMMD5Q9GZQ3 224 aa4.69□□□□□ -1.66
CSDE1-213ENST00000530784 DAZ1Q9NQZ3 744 aaKnown RBP4.69□□□□□ -1.66
CSDE1-213ENST00000530784 BET1LQ9NYM9 111 aa4.69□□□□□ -1.66
CSDE1-213ENST00000530784 BLOC1S6Q9UL45 172 aa4.69□□□□□ -1.66
CSDE1-213ENST00000530784 KIR2DL5BA0A0G2JN68 375 aa4.68□□□□□ -1.66
CSDE1-213ENST00000530784 KIR2DL5BA0A0G2JPC4 375 aa4.68□□□□□ -1.66
CSDE1-213ENST00000530784 IGLC7A0M8Q6 106 aa4.68□□□□□ -1.66
CSDE1-213ENST00000530784 OR4C46A6NHA9 309 aa4.68□□□□□ -1.66
CSDE1-213ENST00000530784 RBFOX2O43251 390 aaKnown RBP eCLIP4.68□□□□□ -1.66
CSDE1-213ENST00000530784 TGOLN2O43493 480 aa4.68□□□□□ -1.66
CSDE1-213ENST00000530784 SSX5O60225 188 aa4.68□□□□□ -1.66
CSDE1-213ENST00000530784 HPRT1P00492 218 aa4.68□□□□□ -1.66
CSDE1-213ENST00000530784 PPYP01298 95 aa4.68□□□□□ -1.66
CSDE1-213ENST00000530784 NQO2P16083 231 aa4.68□□□□□ -1.66
CSDE1-213ENST00000530784 PTBP1P26599 531 aaKnown RBP eCLIP4.68□□□□□ -1.664e-9■■■■■ 37.3
CSDE1-213ENST00000530784 TAS2R31P59538 309 aa4.68□□□□□ -1.66
CSDE1-213ENST00000530784 THOC7Q6I9Y2 204 aaKnown RBP4.68□□□□□ -1.66
CSDE1-213ENST00000530784 HSD17B13Q7Z5P4 300 aaPredicted RBP4.68□□□□□ -1.66
CSDE1-213ENST00000530784 KIR2DL5AQ8N109 375 aa4.68□□□□□ -1.66
CSDE1-213ENST00000530784 RPP25LQ8N5L8 163 aaKnown RBP4.68□□□□□ -1.66
CSDE1-213ENST00000530784 GDPD1Q8N9F7 314 aa4.68□□□□□ -1.66
CSDE1-213ENST00000530784 KIR2DL5BQ8NHK3 375 aa4.68□□□□□ -1.66
CSDE1-213ENST00000530784 LGALS14Q8TCE9 139 aa4.68□□□□□ -1.66
CSDE1-213ENST00000530784 LINC00167Q96N53 147 aa4.68□□□□□ -1.66
CSDE1-213ENST00000530784 ZNF436Q9C0F3 470 aaPredicted RBP4.68□□□□□ -1.66
CSDE1-213ENST00000530784 VCX3BQ9H321 246 aa4.68□□□□□ -1.66
CSDE1-213ENST00000530784 CCL28Q9NRJ3 127 aa4.68□□□□□ -1.66
CSDE1-213ENST00000530784 RHBDL2Q9NX52 303 aa4.68□□□□□ -1.66
CSDE1-213ENST00000530784 ALMS1Q8TCU4 4167 aa4.67□□□□□ -1.66
CSDE1-213ENST00000530784 OR2T8A6NH00 312 aa4.67□□□□□ -1.66
CSDE1-213ENST00000530784 H0Y9J4 135 aa4.67□□□□□ -1.66
CSDE1-213ENST00000530784 SULT1C2O00338 296 aa4.67□□□□□ -1.66
CSDE1-213ENST00000530784 NDUFA4O00483 81 aa4.67□□□□□ -1.66
CSDE1-213ENST00000530784 UPK2O00526 184 aa4.67□□□□□ -1.66
CSDE1-213ENST00000530784 S1PR2O95136 353 aa4.67□□□□□ -1.66
CSDE1-213ENST00000530784 TRAPPC2P0DI81 140 aa4.67□□□□□ -1.66
CSDE1-213ENST00000530784 TRAPPC2BP0DI82 140 aa4.67□□□□□ -1.66
CSDE1-213ENST00000530784 PTHLHP12272 177 aa4.67□□□□□ -1.66
CSDE1-213ENST00000530784 RPA2P15927 270 aa4.67□□□□□ -1.66
CSDE1-213ENST00000530784 FGF9P31371 208 aaPredicted RBP4.67□□□□□ -1.66
CSDE1-213ENST00000530784 HSPA13P48723 471 aa4.67□□□□□ -1.66
CSDE1-213ENST00000530784 FXYD4P59646 89 aa4.67□□□□□ -1.66
CSDE1-213ENST00000530784 KRTAP10-8P60410 259 aa4.67□□□□□ -1.66
CSDE1-213ENST00000530784 POU2AF1Q16633 256 aa4.67□□□□□ -1.66
CSDE1-213ENST00000530784 AADACL3Q5VUY0 350 aa4.67□□□□□ -1.66
CSDE1-213ENST00000530784 SFXN4Q6P4A7 337 aa4.67□□□□□ -1.66
CSDE1-213ENST00000530784 IZUMO2Q6UXV1 221 aa4.67□□□□□ -1.66
CSDE1-213ENST00000530784 TPRA1Q86W33 373 aa4.67□□□□□ -1.66
CSDE1-213ENST00000530784 TMEM17Q86X19 198 aa4.67□□□□□ -1.66
CSDE1-213ENST00000530784 UBAC2Q8NBM4 344 aa4.67□□□□□ -1.66
CSDE1-213ENST00000530784 OR10W1Q8NGF6 305 aa4.67□□□□□ -1.66
CSDE1-213ENST00000530784 OR5B3Q8NH48 314 aa4.67□□□□□ -1.66
CSDE1-213ENST00000530784 OR51H1Q8NH63 302 aa4.67□□□□□ -1.66
CSDE1-213ENST00000530784 CD300LFQ8TDQ1 290 aa4.67□□□□□ -1.66
CSDE1-213ENST00000530784 CNBD2Q96M20 576 aa4.67□□□□□ -1.66
CSDE1-213ENST00000530784 C20orf24Q9BUV8 137 aa4.67□□□□□ -1.66
CSDE1-213ENST00000530784 C6orf62Q9GZU0 229 aaPredicted RBP4.67□□□□□ -1.66
CSDE1-213ENST00000530784 TXNL4BQ9NX01 149 aaKnown RBP4.67□□□□□ -1.66
CSDE1-213ENST00000530784 COMMD9Q9P000 198 aa4.67□□□□□ -1.66
CSDE1-213ENST00000530784 TRAV3A0A0B4J244 114 aa4.66□□□□□ -1.66
CSDE1-213ENST00000530784 K7EMT4 169 aa4.66□□□□□ -1.66
CSDE1-213ENST00000530784 RTL8CO15255 209 aa4.66□□□□□ -1.66
CSDE1-213ENST00000530784 DEDDO75618 318 aa4.66□□□□□ -1.66
CSDE1-213ENST00000530784 SERPINE2P07093 398 aa4.66□□□□□ -1.66
CSDE1-213ENST00000530784 CTSDP07339 412 aaPredicted RBP4.66□□□□□ -1.66
CSDE1-213ENST00000530784 OR13C7P0DN81 318 aa4.66□□□□□ -1.66
CSDE1-213ENST00000530784 PSMB9P28065 219 aa4.66□□□□□ -1.66
CSDE1-213ENST00000530784 GABARAPL2P60520 117 aa4.66□□□□□ -1.66
CSDE1-213ENST00000530784 WT1-ASQ06250 92 aa4.66□□□□□ -1.66
CSDE1-213ENST00000530784 Q56UQ5 140 aa4.66□□□□□ -1.66
CSDE1-213ENST00000530784 C9orf129Q5T035 196 aaKnown RBP4.66□□□□□ -1.66
CSDE1-213ENST00000530784 LGALS9CQ6DKI2 356 aa4.66□□□□□ -1.66
CSDE1-213ENST00000530784 SLC25A24Q6NUK1 477 aa4.66□□□□□ -1.66
CSDE1-213ENST00000530784 ZNF818PQ6ZRF7 136 aa4.66□□□□□ -1.66
CSDE1-213ENST00000530784 BORCS5Q969J3 196 aa4.66□□□□□ -1.66
CSDE1-213ENST00000530784 LSM10Q969L4 123 aaKnown RBP4.66□□□□□ -1.66
CSDE1-213ENST00000530784 GALNT14Q96FL9 552 aa4.66□□□□□ -1.66
CSDE1-213ENST00000530784 HINT2Q9BX68 163 aa4.66□□□□□ -1.66
CSDE1-213ENST00000530784 MFFQ9GZY8 342 aa4.66□□□□□ -1.66
CSDE1-213ENST00000530784 C21orf62Q9NYP8 219 aa4.66□□□□□ -1.66
CSDE1-213ENST00000530784 F11RQ9Y624 299 aaKnown RBP4.66□□□□□ -1.66
CSDE1-213ENST00000530784 IGHV3OR16-8A0A075B7F1 116 aa4.65□□□□□ -1.67
CSDE1-213ENST00000530784 A0A0A6YYH2 397 aa4.65□□□□□ -1.67
CSDE1-213ENST00000530784 IGHV3-21A0A0B4J1V1 117 aa4.65□□□□□ -1.67
CSDE1-213ENST00000530784 TRBV7-9A0A0J9YWB2 115 aa4.65□□□□□ -1.67
CSDE1-213ENST00000530784 A0A0U1RRA0 63 aa4.65□□□□□ -1.67
CSDE1-213ENST00000530784 TEX50A0A1B0GTY4 177 aa4.65□□□□□ -1.67
CSDE1-213ENST00000530784 A6NJ64 397 aa4.65□□□□□ -1.67
CSDE1-213ENST00000530784 ZNF207O43670 478 aaKnown RBP4.65□□□□□ -1.67
CSDE1-213ENST00000530784 MRPS14O60783 128 aaKnown RBP4.65□□□□□ -1.67
CSDE1-213ENST00000530784 P0C879 139 aa4.65□□□□□ -1.67
CSDE1-213ENST00000530784 CBX5P45973 191 aa4.65□□□□□ -1.67
CSDE1-213ENST00000530784 TFPI2P48307 235 aa4.65□□□□□ -1.67
CSDE1-213ENST00000530784 CMC4P56277 68 aaPredicted RBP4.65□□□□□ -1.67
CSDE1-213ENST00000530784 UBE2UQ5VVX9 321 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms