RNA–Protein interactions for RNA: ENST00000520286.5

LSM1-202, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best)

Gene LSM1, Length 776 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-202ENST00000520286 ANKRD17O75179 2603 aaKnown RBP4.65□□□□□ -1.66
LSM1-202ENST00000520286 PTPRQQ9UMZ3 2332 aa4.65□□□□□ -1.66
LSM1-202ENST00000520286 A0A1B0GW15 77 aa4.65□□□□□ -1.67
LSM1-202ENST00000520286 A0A1B0GWA3 101 aa4.65□□□□□ -1.67
LSM1-202ENST00000520286 C5orf63A6NC05 138 aa4.65□□□□□ -1.67
LSM1-202ENST00000520286 C4orf51C9J302 202 aa4.65□□□□□ -1.67
LSM1-202ENST00000520286 H0YJW9 148 aa4.65□□□□□ -1.67
LSM1-202ENST00000520286 PSPHP1O15172 72 aa4.65□□□□□ -1.67
LSM1-202ENST00000520286 CCL25O15444 150 aa4.65□□□□□ -1.67
LSM1-202ENST00000520286 COCHO43405 550 aa4.65□□□□□ -1.67
LSM1-202ENST00000520286 CSN2P05814 226 aa4.65□□□□□ -1.67
LSM1-202ENST00000520286 CISD3P0C7P0 127 aa4.65□□□□□ -1.67
LSM1-202ENST00000520286 ZNF688P0C7X2 276 aa4.65□□□□□ -1.67
LSM1-202ENST00000520286 ESDP10768 282 aa4.65□□□□□ -1.67
LSM1-202ENST00000520286 KRTAP10-3P60369 221 aa4.65□□□□□ -1.67
LSM1-202ENST00000520286 S100A10P60903 97 aa4.65□□□□□ -1.67
LSM1-202ENST00000520286 SLC9A3R2Q15599 337 aa4.65□□□□□ -1.67
LSM1-202ENST00000520286 TAF9Q16594 264 aa4.65□□□□□ -1.67
LSM1-202ENST00000520286 PRSS8Q16651 343 aa4.65□□□□□ -1.67
LSM1-202ENST00000520286 ACOT6Q3I5F7 207 aaPredicted RBP4.65□□□□□ -1.67
LSM1-202ENST00000520286 C6orf99Q4VX62 202 aa4.65□□□□□ -1.67
LSM1-202ENST00000520286 MORN2Q502X0 79 aa4.65□□□□□ -1.67
LSM1-202ENST00000520286 GRINAQ7Z429 371 aa4.65□□□□□ -1.67
LSM1-202ENST00000520286 TMEM25Q86YD3 366 aa4.65□□□□□ -1.67
LSM1-202ENST00000520286 H1FOOQ8IZA3 346 aaPredicted RBP4.65□□□□□ -1.67
LSM1-202ENST00000520286 CLDND2Q8NHS1 167 aa4.65□□□□□ -1.67
LSM1-202ENST00000520286 TSLPQ969D9 159 aa4.65□□□□□ -1.67
LSM1-202ENST00000520286 RBMXL1Q96E39 390 aaKnown RBP4.65□□□□□ -1.67
LSM1-202ENST00000520286 NMNAT3Q96T66 252 aa4.65□□□□□ -1.67
LSM1-202ENST00000520286 RSG1Q9BU20 258 aa4.65□□□□□ -1.67
LSM1-202ENST00000520286 SFXN3Q9BWM7 321 aa4.65□□□□□ -1.67
LSM1-202ENST00000520286 PCBD2Q9H0N5 130 aa4.65□□□□□ -1.67
LSM1-202ENST00000520286 SH3BGRL3Q9H299 93 aa4.65□□□□□ -1.67
LSM1-202ENST00000520286 SLC2A9Q9NRM0 540 aa4.65□□□□□ -1.67
LSM1-202ENST00000520286 URGCP-MRPS24S4R325 110 aa4.65□□□□□ -1.67
LSM1-202ENST00000520286 TEP1Q99973 2627 aaKnown RBP4.65□□□□□ -1.67
LSM1-202ENST00000520286 COL5A1P20908 1838 aaPredicted RBP4.65□□□□□ -1.67
LSM1-202ENST00000520286 MYO9AB2RTY4 2548 aa4.65□□□□□ -1.67
LSM1-202ENST00000520286 UBR5O95071 2799 aaPredicted RBP4.65□□□□□ -1.67
LSM1-202ENST00000520286 CPAMD8Q8IZJ3 1885 aa4.64□□□□□ -1.67
LSM1-202ENST00000520286 THADAQ6YHU6 1953 aa4.64□□□□□ -1.67
LSM1-202ENST00000520286 NOTCH2Q04721 2471 aa4.64□□□□□ -1.67
LSM1-202ENST00000520286 HEATR5AQ86XA9 2040 aa4.64□□□□□ -1.67
LSM1-202ENST00000520286 C20orf202A1L168 122 aa4.64□□□□□ -1.67
LSM1-202ENST00000520286 TMEM14DPA8MWL7 114 aa4.64□□□□□ -1.67
LSM1-202ENST00000520286 TMEM238C9JI98 176 aa4.64□□□□□ -1.67
LSM1-202ENST00000520286 PITX3O75364 302 aa4.64□□□□□ -1.67
LSM1-202ENST00000520286 IFNA21P01568 189 aa4.64□□□□□ -1.67
LSM1-202ENST00000520286 IFNA6P05013 189 aa4.64□□□□□ -1.67
LSM1-202ENST00000520286 GRPRP30550 384 aa4.64□□□□□ -1.67
LSM1-202ENST00000520286 SSR2P43308 183 aa4.64□□□□□ -1.67
LSM1-202ENST00000520286 PSG3Q16557 428 aa4.64□□□□□ -1.67
LSM1-202ENST00000520286 IAH1Q2TAA2 248 aaPredicted RBP4.64□□□□□ -1.67
LSM1-202ENST00000520286 GLYATL3Q5SZD4 288 aa4.64□□□□□ -1.67
LSM1-202ENST00000520286 C22orf39Q6P5X5 142 aa4.64□□□□□ -1.67
LSM1-202ENST00000520286 ZNF705AQ6ZN79 300 aaPredicted RBP4.64□□□□□ -1.67
LSM1-202ENST00000520286 SGPP2Q8IWX5 399 aa4.64□□□□□ -1.67
LSM1-202ENST00000520286 LGI3Q8N145 548 aa4.64□□□□□ -1.67
LSM1-202ENST00000520286 ZNF645Q8N7E2 425 aa4.64□□□□□ -1.67
LSM1-202ENST00000520286 OR2M7Q8NG81 312 aa4.64□□□□□ -1.67
LSM1-202ENST00000520286 OR13G1Q8NGZ3 307 aa4.64□□□□□ -1.67
LSM1-202ENST00000520286 FNDC9Q8TBE3 224 aa4.64□□□□□ -1.67
LSM1-202ENST00000520286 FAM213BQ8TBF2 198 aa4.64□□□□□ -1.67
LSM1-202ENST00000520286 DDIT4LQ96D03 193 aa4.64□□□□□ -1.67
LSM1-202ENST00000520286 PARD6GQ9BYG4 376 aaPredicted RBP4.64□□□□□ -1.67
LSM1-202ENST00000520286 TBL1XR1Q9BZK7 514 aa4.64□□□□□ -1.67
LSM1-202ENST00000520286 SMIM3Q9BZL3 60 aa4.64□□□□□ -1.67
LSM1-202ENST00000520286 METTL8Q9H825 291 aaKnown RBP4.64□□□□□ -1.67
LSM1-202ENST00000520286 GPR84Q9NQS5 396 aa4.64□□□□□ -1.67
LSM1-202ENST00000520286 TAS2R4Q9NYW5 299 aa4.64□□□□□ -1.67
LSM1-202ENST00000520286 HS3ST2Q9Y278 367 aa4.64□□□□□ -1.67
LSM1-202ENST00000520286 COL6A6A6NMZ7 2263 aa4.63□□□□□ -1.67
LSM1-202ENST00000520286 TMEM131Q92545 1883 aa4.63□□□□□ -1.67
LSM1-202ENST00000520286 FAM240AA0A1B0GVK7 77 aa4.63□□□□□ -1.67
LSM1-202ENST00000520286 CRYM-AS1A6NIL9 109 aa4.63□□□□□ -1.67
LSM1-202ENST00000520286 F6UZH7 168 aa4.63□□□□□ -1.67
LSM1-202ENST00000520286 VAMP5O95183 116 aa4.63□□□□□ -1.67
LSM1-202ENST00000520286 IGHV3-11P01762 117 aa4.63□□□□□ -1.67
LSM1-202ENST00000520286 HLA-DQA1P01909 254 aa4.63□□□□□ -1.67
LSM1-202ENST00000520286 PRH1P02810 166 aa4.63□□□□□ -1.67
LSM1-202ENST00000520286 ISG15P05161 165 aa4.63□□□□□ -1.67
LSM1-202ENST00000520286 NBEAP1P0C6P0 100 aa4.63□□□□□ -1.67
LSM1-202ENST00000520286 GIMD1P0DJR0 217 aa4.63□□□□□ -1.67
LSM1-202ENST00000520286 HIST1H1TP22492 207 aaPredicted RBP4.63□□□□□ -1.67
LSM1-202ENST00000520286 PSMB5P28074 263 aa4.63□□□□□ -1.67
LSM1-202ENST00000520286 HSD11B1P28845 292 aa4.63□□□□□ -1.67
LSM1-202ENST00000520286 DNASE1L1P49184 302 aa4.63□□□□□ -1.67
LSM1-202ENST00000520286 UBE2G2P60604 165 aa4.63□□□□□ -1.67
LSM1-202ENST00000520286 HIST1H3AP68431 136 aa4.63□□□□□ -1.67
LSM1-202ENST00000520286 IGFBP7Q16270 282 aa4.63□□□□□ -1.67
LSM1-202ENST00000520286 TCF24Q7RTU0 167 aa4.63□□□□□ -1.67
LSM1-202ENST00000520286 TMEM256Q8N2U0 113 aa4.63□□□□□ -1.67
LSM1-202ENST00000520286 OR5T1Q8NG75 326 aa4.63□□□□□ -1.67
LSM1-202ENST00000520286 OR2V1Q8NHB1 315 aa4.63□□□□□ -1.67
LSM1-202ENST00000520286 OTOSQ8NHW6 89 aa4.63□□□□□ -1.67
LSM1-202ENST00000520286 TP53RKQ96S44 253 aa4.63□□□□□ -1.67
LSM1-202ENST00000520286 ULBP3Q9BZM4 244 aa4.63□□□□□ -1.67
LSM1-202ENST00000520286 ZNF430Q9H8G1 570 aaPredicted RBP4.63□□□□□ -1.67
LSM1-202ENST00000520286 C8orf17Q9NRJ1 99 aa4.63□□□□□ -1.67
LSM1-202ENST00000520286 CKLFQ9UBR5 152 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms