RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 LINC00587B1AMM8 73 aa2.03□□□□□ -2.08
HMGB1P46-201ENST00000520062 AIPO00170 330 aa2.03□□□□□ -2.08
HMGB1P46-201ENST00000520062 BANF1O75531 89 aa2.03□□□□□ -2.08
HMGB1P46-201ENST00000520062 NDUFC2O95298 119 aa2.03□□□□□ -2.08
HMGB1P46-201ENST00000520062 BAALC-AS2P0C853 105 aa2.03□□□□□ -2.08
HMGB1P46-201ENST00000520062 MIFP14174 115 aa2.03□□□□□ -2.08
HMGB1P46-201ENST00000520062 SRP14P37108 136 aaKnown RBP2.03□□□□□ -2.08
HMGB1P46-201ENST00000520062 NCALDP61601 193 aa2.03□□□□□ -2.08
HMGB1P46-201ENST00000520062 RHOBP62745 196 aa2.03□□□□□ -2.08
HMGB1P46-201ENST00000520062 GNG3P63215 75 aa2.03□□□□□ -2.08
HMGB1P46-201ENST00000520062 AKR1C8PQ5T2L2 129 aa2.03□□□□□ -2.08
HMGB1P46-201ENST00000520062 DCUN1D2Q6PH85 259 aa2.03□□□□□ -2.08
HMGB1P46-201ENST00000520062 OR10K1Q8NGX5 313 aa2.03□□□□□ -2.08
HMGB1P46-201ENST00000520062 OR13C6PQ8NH95 151 aa2.03□□□□□ -2.08
HMGB1P46-201ENST00000520062 C12orf57Q99622 126 aa2.03□□□□□ -2.08
HMGB1P46-201ENST00000520062 NAA38Q9BRA0 125 aaKnown RBP2.03□□□□□ -2.08
HMGB1P46-201ENST00000520062 SH3BGRL3Q9H299 93 aa2.03□□□□□ -2.08
HMGB1P46-201ENST00000520062 UTP11Q9Y3A2 253 aaKnown RBP2.03□□□□□ -2.08
HMGB1P46-201ENST00000520062 UFC1Q9Y3C8 167 aa2.03□□□□□ -2.08
HMGB1P46-201ENST00000520062 CUL9Q8IWT3 2517 aa2.02□□□□□ -2.09
HMGB1P46-201ENST00000520062 FAM135AQ9P2D6 1515 aa2.02□□□□□ -2.09
HMGB1P46-201ENST00000520062 SMG6Q86US8 1419 aaKnown RBP2.02□□□□□ -2.09
HMGB1P46-201ENST00000520062 MIA2Q96PC5 1412 aa2.02□□□□□ -2.09
HMGB1P46-201ENST00000520062 SETD5Q9C0A6 1442 aa2.02□□□□□ -2.09
HMGB1P46-201ENST00000520062 PRORSD1PA6NEY8 169 aa2.02□□□□□ -2.09
HMGB1P46-201ENST00000520062 G3V2T6 193 aa2.02□□□□□ -2.09
HMGB1P46-201ENST00000520062 GADD45GO95257 159 aa2.02□□□□□ -2.09
HMGB1P46-201ENST00000520062 S100A8P05109 93 aa2.02□□□□□ -2.09
HMGB1P46-201ENST00000520062 SMIM6P0DI80 62 aa2.02□□□□□ -2.09
HMGB1P46-201ENST00000520062 GNG2P59768 71 aa2.02□□□□□ -2.09
HMGB1P46-201ENST00000520062 SMIM21Q3B7S5 101 aa2.02□□□□□ -2.09
HMGB1P46-201ENST00000520062 GRPEL2Q8TAA5 225 aa2.02□□□□□ -2.09
HMGB1P46-201ENST00000520062 AQP3Q92482 292 aa2.02□□□□□ -2.09
HMGB1P46-201ENST00000520062 SLAMF6Q96DU3 332 aa2.02□□□□□ -2.09
HMGB1P46-201ENST00000520062 YPEL2Q96QA6 119 aa2.02□□□□□ -2.09
HMGB1P46-201ENST00000520062 SLC50A1Q9BRV3 221 aa2.02□□□□□ -2.09
HMGB1P46-201ENST00000520062 CYSTM1Q9H1C7 97 aa2.02□□□□□ -2.09
HMGB1P46-201ENST00000520062 LYRM2Q9NU23 88 aaPredicted RBP2.02□□□□□ -2.09
HMGB1P46-201ENST00000520062 RASL12Q9NYN1 266 aa2.02□□□□□ -2.09
HMGB1P46-201ENST00000520062 XIRP1Q702N8 1843 aaKnown RBP2.02□□□□□ -2.09
HMGB1P46-201ENST00000520062 ZCCHC11Q5TAX3 1644 aaKnown RBP2.02□□□□□ -2.09
HMGB1P46-201ENST00000520062 RB1CC1Q8TDY2 1594 aa2.02□□□□□ -2.09
HMGB1P46-201ENST00000520062 PLXND1Q9Y4D7 1925 aa2.01□□□□□ -2.09
HMGB1P46-201ENST00000520062 ZNF106Q9H2Y7 1883 aaKnown RBP2.01□□□□□ -2.09
HMGB1P46-201ENST00000520062 STRCQ7RTU9 1775 aa2.01□□□□□ -2.09
HMGB1P46-201ENST00000520062 BORCS7-ASMTA0A0B4J1R7 106 aa2.01□□□□□ -2.09
HMGB1P46-201ENST00000520062 DLEU1O43261 78 aa2.01□□□□□ -2.09
HMGB1P46-201ENST00000520062 OR2T1O43869 369 aa2.01□□□□□ -2.09
HMGB1P46-201ENST00000520062 TSPAN19P0C672 248 aa2.01□□□□□ -2.09
HMGB1P46-201ENST00000520062 RNASE4P34096 147 aaKnown RBP2.01□□□□□ -2.09
HMGB1P46-201ENST00000520062 PHBP35232 272 aa2.01□□□□□ -2.09
HMGB1P46-201ENST00000520062 SCGB2B2Q4G0G5 96 aa2.01□□□□□ -2.09
HMGB1P46-201ENST00000520062 TMEM128Q5BJH2 165 aa2.01□□□□□ -2.09
HMGB1P46-201ENST00000520062 GINS3Q9BRX5 216 aa2.01□□□□□ -2.09
HMGB1P46-201ENST00000520062 MED29Q9NX70 200 aa2.01□□□□□ -2.09
HMGB1P46-201ENST00000520062 SLC35A3Q9Y2D2 325 aa2.01□□□□□ -2.09
HMGB1P46-201ENST00000520062 EIF4G3O43432 1585 aaKnown RBP2.01□□□□□ -2.09
HMGB1P46-201ENST00000520062 AKAP11Q9UKA4 1901 aa2.01□□□□□ -2.09
HMGB1P46-201ENST00000520062 A2MP01023 1474 aa2.01□□□□□ -2.09
HMGB1P46-201ENST00000520062 COL11A1P12107 1806 aaPredicted RBP2.01□□□□□ -2.09
HMGB1P46-201ENST00000520062 SOGA1O94964 1423 aa2□□□□□ -2.09
HMGB1P46-201ENST00000520062 FAM135BQ49AJ0 1406 aa2□□□□□ -2.09
HMGB1P46-201ENST00000520062 UHRF1BP1Q6BDS2 1440 aa2□□□□□ -2.09
HMGB1P46-201ENST00000520062 VPS8Q8N3P4 1428 aa2□□□□□ -2.09
HMGB1P46-201ENST00000520062 WDR97A6NE52 1622 aa2□□□□□ -2.09
HMGB1P46-201ENST00000520062 UQCRHLA0A096LP55 91 aa2□□□□□ -2.09
HMGB1P46-201ENST00000520062 A0A1B0GV90 55 aa2□□□□□ -2.09
HMGB1P46-201ENST00000520062 E7EQ34 232 aa2□□□□□ -2.09
HMGB1P46-201ENST00000520062 H7C1C5 153 aa2□□□□□ -2.09
HMGB1P46-201ENST00000520062 MRPS14O60783 128 aaKnown RBP2□□□□□ -2.09
HMGB1P46-201ENST00000520062 IFNA4P05014 189 aa2□□□□□ -2.09
HMGB1P46-201ENST00000520062 DBIP07108 87 aaKnown RBP2□□□□□ -2.09
HMGB1P46-201ENST00000520062 UQCRHP07919 91 aa2□□□□□ -2.09
HMGB1P46-201ENST00000520062 LCN6P62502 163 aa2□□□□□ -2.09
HMGB1P46-201ENST00000520062 GNG5P63218 68 aa2□□□□□ -2.09
HMGB1P46-201ENST00000520062 KRTAP21-3Q3LHN1 58 aa2□□□□□ -2.09
HMGB1P46-201ENST00000520062 RNASE10Q5GAN6 216 aaKnown RBP2□□□□□ -2.09
HMGB1P46-201ENST00000520062 TMEM78Q5T7P6 136 aa2□□□□□ -2.09
HMGB1P46-201ENST00000520062 SAMD13Q5VXD3 122 aa2□□□□□ -2.09
HMGB1P46-201ENST00000520062 SMIM20Q8N5G0 67 aa2□□□□□ -2.09
HMGB1P46-201ENST00000520062 OR8J3Q8NGG0 315 aa2□□□□□ -2.09
HMGB1P46-201ENST00000520062 GPER1Q99527 375 aa2□□□□□ -2.09
HMGB1P46-201ENST00000520062 TMEM70Q9BUB7 260 aa2□□□□□ -2.09
HMGB1P46-201ENST00000520062 LRTM1Q9HBL6 345 aa2□□□□□ -2.09
HMGB1P46-201ENST00000520062 COPZ2Q9P299 210 aa2□□□□□ -2.09
HMGB1P46-201ENST00000520062 HS3ST2Q9Y278 367 aa2□□□□□ -2.09
HMGB1P46-201ENST00000520062 ASB4Q9Y574 426 aa2□□□□□ -2.09
HMGB1P46-201ENST00000520062 TRGV10A0A0A0MS01 117 aa1.99□□□□□ -2.09
HMGB1P46-201ENST00000520062 MAP1LC3B2A6NCE7 125 aa1.99□□□□□ -2.09
HMGB1P46-201ENST00000520062 C5orf58C9J3I9 102 aa1.99□□□□□ -2.09
HMGB1P46-201ENST00000520062 K7ERU9 68 aa1.99□□□□□ -2.09
HMGB1P46-201ENST00000520062 TAX1BP3O14907 124 aa1.99□□□□□ -2.09
HMGB1P46-201ENST00000520062 TNFSF15O95150 251 aa1.99□□□□□ -2.09
HMGB1P46-201ENST00000520062 APOA2P02652 100 aa1.99□□□□□ -2.09
HMGB1P46-201ENST00000520062 RPS28P62857 69 aaKnown RBP1.99□□□□□ -2.09
HMGB1P46-201ENST00000520062 MRPS10P82664 201 aaKnown RBP1.99□□□□□ -2.09
HMGB1P46-201ENST00000520062 BCL2L15Q5TBC7 163 aa1.99□□□□□ -2.09
HMGB1P46-201ENST00000520062 C22orf39Q6P5X5 142 aa1.99□□□□□ -2.09
HMGB1P46-201ENST00000520062 LRRC18Q8N456 261 aa1.99□□□□□ -2.09
HMGB1P46-201ENST00000520062 OR9Q1Q8NGQ5 310 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 283.4 ms