RNA–Protein interactions for RNA: ENST00000519054.5

SKP1-205, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 654 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-205ENST00000519054 SLC22A4Q9H015 551 aa0.78□□□□□ -2.28
SKP1-205ENST00000519054 BOLA2Q9H3K6 86 aa0.78□□□□□ -2.28
SKP1-205ENST00000519054 PARVAQ9NVD7 372 aa0.78□□□□□ -2.28
SKP1-205ENST00000519054 DOK5Q9P104 306 aa0.78□□□□□ -2.28
SKP1-205ENST00000519054 DNAJC12Q9UKB3 198 aa0.78□□□□□ -2.28
SKP1-205ENST00000519054 PSMD13Q9UNM6 376 aa0.78□□□□□ -2.28
SKP1-205ENST00000519054 RPL26L1Q9UNX3 145 aaKnown RBP0.78□□□□□ -2.28
SKP1-205ENST00000519054 MYH11P35749 1972 aa0.77□□□□□ -2.29
SKP1-205ENST00000519054 A0A1B0GVG6 124 aa0.77□□□□□ -2.29
SKP1-205ENST00000519054 TCRBV4S1A1TA0A5B7 111 aa0.77□□□□□ -2.29
SKP1-205ENST00000519054 DAPL1A0PJW8 107 aa0.77□□□□□ -2.29
SKP1-205ENST00000519054 TRAPPC2LH3BP13 241 aa0.77□□□□□ -2.29
SKP1-205ENST00000519054 H3BPC8 53 aa0.77□□□□□ -2.29
SKP1-205ENST00000519054 H3BSH0 61 aa0.77□□□□□ -2.29
SKP1-205ENST00000519054 M0R2T5 61 aa0.77□□□□□ -2.29
SKP1-205ENST00000519054 M0R381 172 aa0.77□□□□□ -2.29
SKP1-205ENST00000519054 SLC17A3O00476 420 aa0.77□□□□□ -2.29
SKP1-205ENST00000519054 ATP8B1O43520 1251 aa0.77□□□□□ -2.29
SKP1-205ENST00000519054 HBZP02008 142 aa0.77□□□□□ -2.29
SKP1-205ENST00000519054 ZNF728P0DKX0 622 aa0.77□□□□□ -2.29
SKP1-205ENST00000519054 HPCAP84074 193 aa0.77□□□□□ -2.29
SKP1-205ENST00000519054 AGTRAPQ6RW13 159 aa0.77□□□□□ -2.29
SKP1-205ENST00000519054 COA5Q86WW8 74 aa0.77□□□□□ -2.29
SKP1-205ENST00000519054 FUNDC1Q8IVP5 155 aa0.77□□□□□ -2.29
SKP1-205ENST00000519054 CD302Q8IX05 232 aa0.77□□□□□ -2.29
SKP1-205ENST00000519054 TLCD1Q96CP7 247 aa0.77□□□□□ -2.29
SKP1-205ENST00000519054 MGLLQ99685 303 aa0.77□□□□□ -2.29
SKP1-205ENST00000519054 NKX6-2Q9C056 277 aaPredicted RBP0.77□□□□□ -2.29
SKP1-205ENST00000519054 NSRP1Q9H0G5 558 aaKnown RBP0.77□□□□□ -2.29
SKP1-205ENST00000519054 METTL9Q9H1A3 318 aa0.77□□□□□ -2.29
SKP1-205ENST00000519054 CHMP4BQ9H444 224 aaKnown RBP0.77□□□□□ -2.29
SKP1-205ENST00000519054 UCK1Q9HA47 277 aa0.77□□□□□ -2.29
SKP1-205ENST00000519054 STOML2Q9UJZ1 356 aa0.77□□□□□ -2.29
SKP1-205ENST00000519054 SNX12Q9UMY4 172 aa0.77□□□□□ -2.29
SKP1-205ENST00000519054 SBDSQ9Y3A5 250 aaKnown RBP eCLIP0.77□□□□□ -2.29
SKP1-205ENST00000519054 ALG5Q9Y673 324 aa0.77□□□□□ -2.29
SKP1-205ENST00000519054 MUC16Q8WXI7 14507 aa0.76□□□□□ -2.29
SKP1-205ENST00000519054 A0A0D9SEW6 157 aa0.76□□□□□ -2.29
SKP1-205ENST00000519054 C11orf86A6NJI1 115 aa0.76□□□□□ -2.29
SKP1-205ENST00000519054 OR11H12B2RN74 326 aa0.76□□□□□ -2.29
SKP1-205ENST00000519054 COPEO14579 308 aa0.76□□□□□ -2.29
SKP1-205ENST00000519054 ITGB1BP1O14713 200 aa0.76□□□□□ -2.29
SKP1-205ENST00000519054 BIRC5O15392 142 aa0.76□□□□□ -2.29
SKP1-205ENST00000519054 GNRH2O43555 120 aa0.76□□□□□ -2.29
SKP1-205ENST00000519054 ATP6V1G2O95670 118 aa0.76□□□□□ -2.29
SKP1-205ENST00000519054 LINC00614P0C842 121 aa0.76□□□□□ -2.29
SKP1-205ENST00000519054 HIST1H1CP16403 213 aaKnown RBP0.76□□□□□ -2.29
SKP1-205ENST00000519054 CFL1P23528 166 aaKnown RBP0.76□□□□□ -2.29
SKP1-205ENST00000519054 RAB13P51153 203 aa0.76□□□□□ -2.29
SKP1-205ENST00000519054 MAP3K7CLP57077 242 aa0.76□□□□□ -2.29
SKP1-205ENST00000519054 SKP1P63208 163 aa0.76□□□□□ -2.29
SKP1-205ENST00000519054 FABP5Q01469 135 aa0.76□□□□□ -2.29
SKP1-205ENST00000519054 PDPK2PQ6A1A2 396 aa0.76□□□□□ -2.29
SKP1-205ENST00000519054 C22orf39Q6P5X5 142 aa0.76□□□□□ -2.29
SKP1-205ENST00000519054 NATD1Q8N6N6 113 aa0.76□□□□□ -2.29
SKP1-205ENST00000519054 OR11H2Q8NH07 326 aa0.76□□□□□ -2.29
SKP1-205ENST00000519054 ASB13Q8WXK3 278 aa0.76□□□□□ -2.29
SKP1-205ENST00000519054 CPNE2Q96FN4 548 aaPredicted RBP0.76□□□□□ -2.29
SKP1-205ENST00000519054 RETNLBQ9BQ08 111 aa0.76□□□□□ -2.29
SKP1-205ENST00000519054 LXNQ9BS40 222 aa0.76□□□□□ -2.29
SKP1-205ENST00000519054 NDEL1Q9GZM8 345 aa0.76□□□□□ -2.29
SKP1-205ENST00000519054 TANC2Q9HCD6 1990 aa0.76□□□□□ -2.29
SKP1-205ENST00000519054 TMED7-TICAM2A0A0A6YYA0 188 aa0.75□□□□□ -2.29
SKP1-205ENST00000519054 TRAV8-1A0A0A6YYK1 113 aa0.75□□□□□ -2.29
SKP1-205ENST00000519054 TEX50A0A1B0GTY4 177 aa0.75□□□□□ -2.29
SKP1-205ENST00000519054 A0A1B0GX78 115 aa0.75□□□□□ -2.29
SKP1-205ENST00000519054 C2orf74A8MZ97 194 aa0.75□□□□□ -2.29
SKP1-205ENST00000519054 F5H768 121 aa0.75□□□□□ -2.29
SKP1-205ENST00000519054 GSTZ1O43708 216 aaPredicted RBP0.75□□□□□ -2.29
SKP1-205ENST00000519054 HPGDSO60760 199 aa0.75□□□□□ -2.29
SKP1-205ENST00000519054 NDUFB2O95178 105 aa0.75□□□□□ -2.29
SKP1-205ENST00000519054 IFNA5P01569 189 aa0.75□□□□□ -2.29
SKP1-205ENST00000519054 IGHV1-69P01742 117 aa0.75□□□□□ -2.29
SKP1-205ENST00000519054 ATP6V0CP27449 155 aa0.75□□□□□ -2.29
SKP1-205ENST00000519054 CASQ1P31415 396 aa0.75□□□□□ -2.29
SKP1-205ENST00000519054 XCL1P47992 114 aa0.75□□□□□ -2.29
SKP1-205ENST00000519054 EVX1P49640 407 aa0.75□□□□□ -2.29
SKP1-205ENST00000519054 IDH3GP51553 393 aaPredicted RBP0.75□□□□□ -2.29
SKP1-205ENST00000519054 RBM11P57052 281 aaKnown RBP0.75□□□□□ -2.29
SKP1-205ENST00000519054 TAS2R45P59539 299 aa0.75□□□□□ -2.29
SKP1-205ENST00000519054 SNRPD2P62316 118 aaKnown RBP0.75□□□□□ -2.29
SKP1-205ENST00000519054 RELAQ04206 551 aa0.75□□□□□ -2.29
SKP1-205ENST00000519054 JOSD1Q15040 202 aaPredicted RBP0.75□□□□□ -2.29
SKP1-205ENST00000519054 UAP1Q16222 522 aaPredicted RBP0.75□□□□□ -2.29
SKP1-205ENST00000519054 KRTAP19-2Q3LHN2 52 aa0.75□□□□□ -2.29
SKP1-205ENST00000519054 DNAL1Q4LDG9 190 aa0.75□□□□□ -2.29
SKP1-205ENST00000519054 C10orf99Q6UWK7 81 aa0.75□□□□□ -2.29
SKP1-205ENST00000519054 SBSNQ6UWP8 590 aa0.75□□□□□ -2.29
SKP1-205ENST00000519054 ZCCHC23Q6ZST2 131 aa0.75□□□□□ -2.29
SKP1-205ENST00000519054 LYG2Q86SG7 212 aa0.75□□□□□ -2.29
SKP1-205ENST00000519054 Q8N2B8 174 aa0.75□□□□□ -2.29
SKP1-205ENST00000519054 TMEM86AQ8N2M4 240 aa0.75□□□□□ -2.29
SKP1-205ENST00000519054 SLC35F6Q8N357 371 aa0.75□□□□□ -2.29
SKP1-205ENST00000519054 TMEM156Q8N614 296 aa0.75□□□□□ -2.29
SKP1-205ENST00000519054 PACRGLQ8N7B6 248 aa0.75□□□□□ -2.29
SKP1-205ENST00000519054 ZNF283Q8N7M2 679 aa0.75□□□□□ -2.29
SKP1-205ENST00000519054 OR2D3Q8NGH3 330 aa0.75□□□□□ -2.29
SKP1-205ENST00000519054 SMCR5Q8TEV8 140 aa0.75□□□□□ -2.29
SKP1-205ENST00000519054 Q8WTZ3 238 aa0.75□□□□□ -2.29
SKP1-205ENST00000519054 SMIM19Q96E16 107 aa0.75□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms