RNA–Protein interactions for RNA: ENST00000515737.5

SH3BP2-228, Transcript of SH3 domain binding protein 2, humanhuman

TSL 2

Gene SH3BP2, Length 2,579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3BP2-228ENST00000515737 NOTCH2Q04721 2471 aa13.18□□□□□ -0.3
SH3BP2-228ENST00000515737 FCGR2BP31994 310 aaPredicted RBP13.18□□□□□ -0.3
SH3BP2-228ENST00000515737 Q8WTZ3 238 aa13.18□□□□□ -0.3
SH3BP2-228ENST00000515737 FXYD5Q96DB9 178 aa13.18□□□□□ -0.3
SH3BP2-228ENST00000515737 NOL4LQ96MY1 436 aaPredicted RBP13.18□□□□□ -0.3
SH3BP2-228ENST00000515737 A0A1W2PRE2 83 aa13.18□□□□□ -0.3
SH3BP2-228ENST00000515737 SUMO1P63165 101 aaKnown RBP13.18□□□□□ -0.3
SH3BP2-228ENST00000515737 C9orf139Q6ZV77 190 aa13.18□□□□□ -0.3
SH3BP2-228ENST00000515737 ZNF502Q8TBZ5 544 aa13.18□□□□□ -0.3
SH3BP2-228ENST00000515737 CHRDL1Q9BU40 450 aa13.18□□□□□ -0.3
SH3BP2-228ENST00000515737 WI2-2373I1.2A0A1W2PRP0 233 aa13.17□□□□□ -0.3
SH3BP2-228ENST00000515737 GGTLC3B5MD39 225 aa13.17□□□□□ -0.3
SH3BP2-228ENST00000515737 SCGB2A1O75556 95 aa13.17□□□□□ -0.3
SH3BP2-228ENST00000515737 GPR183P32249 361 aa13.17□□□□□ -0.3
SH3BP2-228ENST00000515737 ADIRFQ15847 76 aa13.17□□□□□ -0.3
SH3BP2-228ENST00000515737 ISOC2Q96AB3 205 aa13.17□□□□□ -0.3
SH3BP2-228ENST00000515737 B4DEV8 164 aa13.16□□□□□ -0.3
SH3BP2-228ENST00000515737 OR2C1O95371 312 aa13.16□□□□□ -0.3
SH3BP2-228ENST00000515737 CLEC3BP05452 202 aa13.16□□□□□ -0.3
SH3BP2-228ENST00000515737 ADMP35318 185 aa13.16□□□□□ -0.3
SH3BP2-228ENST00000515737 MYO9AB2RTY4 2548 aa13.16□□□□□ -0.3
SH3BP2-228ENST00000515737 RPL23P62829 140 aaKnown RBP13.16□□□□□ -0.3
SH3BP2-228ENST00000515737 USF2Q15853 346 aaPredicted RBP13.16□□□□□ -0.3
SH3BP2-228ENST00000515737 OR5R1Q8NH85 324 aa13.16□□□□□ -0.3
SH3BP2-228ENST00000515737 AP4M1O00189 453 aa13.15□□□□□ -0.3
SH3BP2-228ENST00000515737 BLNKQ8WV28 456 aa13.15□□□□□ -0.3
SH3BP2-228ENST00000515737 A0A087WWC5 75 aa13.15□□□□□ -0.3
SH3BP2-228ENST00000515737 IGHV3-35A0A0C4DH35 117 aa13.15□□□□□ -0.3
SH3BP2-228ENST00000515737 NBEAP1P0C6P0 100 aa13.15□□□□□ -0.3
SH3BP2-228ENST00000515737 GP9P14770 177 aa13.15□□□□□ -0.3
SH3BP2-228ENST00000515737 CRYBB3P26998 211 aa13.15□□□□□ -0.3
SH3BP2-228ENST00000515737 PPIFP30405 207 aaKnown RBP13.15□□□□□ -0.3
SH3BP2-228ENST00000515737 CLEC19AQ6UXS0 136 aa13.15□□□□□ -0.3
SH3BP2-228ENST00000515737 Q6YL49 198 aa13.15□□□□□ -0.3
SH3BP2-228ENST00000515737 C11orf52Q96A22 123 aa13.15□□□□□ -0.3
SH3BP2-228ENST00000515737 EEF1AKMT3Q96AZ1 226 aa13.15□□□□□ -0.3
SH3BP2-228ENST00000515737 CCDC140Q96MF4 163 aa13.15□□□□□ -0.3
SH3BP2-228ENST00000515737 FOXC2Q99958 501 aa13.15□□□□□ -0.3
SH3BP2-228ENST00000515737 TUBA4BQ9H853 241 aa13.15□□□□□ -0.3
SH3BP2-228ENST00000515737 TRGV3P03979 118 aa13.14□□□□□ -0.31
SH3BP2-228ENST00000515737 ATP5G2Q06055 141 aa13.14□□□□□ -0.31
SH3BP2-228ENST00000515737 SHANK2-AS3Q9BTD1 123 aa13.14□□□□□ -0.31
SH3BP2-228ENST00000515737 RANP62826 216 aaKnown RBP13.14□□□□□ -0.31
SH3BP2-228ENST00000515737 ZNF343Q6P1L6 599 aa13.14□□□□□ -0.31
SH3BP2-228ENST00000515737 ZNF600Q6ZNG1 722 aa13.14□□□□□ -0.31
SH3BP2-228ENST00000515737 ELOVL1Q9BW60 279 aa13.14□□□□□ -0.31
SH3BP2-228ENST00000515737 TRBV20OR9-2A0A075B6H5 130 aa13.13□□□□□ -0.31
SH3BP2-228ENST00000515737 TRBV7-1A0A0A6YYK4 115 aa13.13□□□□□ -0.31
SH3BP2-228ENST00000515737 H3BRN7 92 aa13.13□□□□□ -0.31
SH3BP2-228ENST00000515737 AURKAIP1Q9NWT8 199 aaPredicted RBP13.13□□□□□ -0.31
SH3BP2-228ENST00000515737 GAR1Q9NY12 217 aaKnown RBP13.13□□□□□ -0.31
SH3BP2-228ENST00000515737 AKAP9Q99996 3911 aa13.13□□□□□ -0.31
SH3BP2-228ENST00000515737 COLCA2A8K830 154 aa13.13□□□□□ -0.31
SH3BP2-228ENST00000515737 VPREB3Q9UKI3 123 aa13.13□□□□□ -0.31
SH3BP2-228ENST00000515737 PGPEP1LA6NFU8 196 aa13.12□□□□□ -0.31
SH3BP2-228ENST00000515737 FAM223BA6NKX1 122 aa13.12□□□□□ -0.31
SH3BP2-228ENST00000515737 H3BTX0 84 aa13.12□□□□□ -0.31
SH3BP2-228ENST00000515737 TPPP2P59282 170 aa13.12□□□□□ -0.31
SH3BP2-228ENST00000515737 RNF212Q495C1 297 aa13.12□□□□□ -0.31
SH3BP2-228ENST00000515737 FAM223AQ8IWN6 122 aa13.12□□□□□ -0.31
SH3BP2-228ENST00000515737 GNB4Q9HAV0 340 aa13.12□□□□□ -0.31
SH3BP2-228ENST00000515737 ZNF98A6NK75 572 aa13.12□□□□□ -0.31
SH3BP2-228ENST00000515737 RPL35P42766 123 aaKnown RBP13.12□□□□□ -0.31
SH3BP2-228ENST00000515737 IL17RELQ6ZVW7 336 aa13.12□□□□□ -0.31
SH3BP2-228ENST00000515737 LINC01551Q86U37 167 aa13.12□□□□□ -0.31
SH3BP2-228ENST00000515737 C15orf54Q8N8G6 183 aa13.12□□□□□ -0.31
SH3BP2-228ENST00000515737 TMEM14CQ9P0S9 112 aa13.12□□□□□ -0.31
SH3BP2-228ENST00000515737 IGHV3OR16-8A0A075B7F1 116 aa13.11□□□□□ -0.31
SH3BP2-228ENST00000515737 HOXA3O43365 443 aaPredicted RBP13.11□□□□□ -0.31
SH3BP2-228ENST00000515737 TMEM95Q3KNT9 176 aa13.11□□□□□ -0.31
SH3BP2-228ENST00000515737 S100A7AQ86SG5 101 aa13.11□□□□□ -0.31
SH3BP2-228ENST00000515737 BPIFA4PQ86YQ2 179 aa13.11□□□□□ -0.31
SH3BP2-228ENST00000515737 FAM24BQ8N5W8 94 aa13.11□□□□□ -0.31
SH3BP2-228ENST00000515737 HELTA6NFD8 242 aa13.11□□□□□ -0.31
SH3BP2-228ENST00000515737 ZNF329Q86UD4 541 aa13.11□□□□□ -0.31
SH3BP2-228ENST00000515737 C2CD4CQ8TF44 421 aa13.11□□□□□ -0.31
SH3BP2-228ENST00000515737 TGOLN2O43493 480 aa13.1□□□□□ -0.31
SH3BP2-228ENST00000515737 HIST1H1EP10412 219 aaKnown RBP13.1□□□□□ -0.31
SH3BP2-228ENST00000515737 PF4V1P10720 104 aa13.1□□□□□ -0.31
SH3BP2-228ENST00000515737 TOMM20LQ6UXN7 152 aa13.1□□□□□ -0.31
SH3BP2-228ENST00000515737 KLK15Q9H2R5 256 aa13.1□□□□□ -0.31
SH3BP2-228ENST00000515737 PRDM13Q9H4Q3 707 aa13.1□□□□□ -0.31
SH3BP2-228ENST00000515737 PGPA6NDG6 321 aa13.1□□□□□ -0.31
SH3BP2-228ENST00000515737 H3BUA1 57 aa13.1□□□□□ -0.31
SH3BP2-228ENST00000515737 MT-ND4LP03901 98 aa13.1□□□□□ -0.31
SH3BP2-228ENST00000515737 MYCNOSP40205 109 aa13.1□□□□□ -0.31
SH3BP2-228ENST00000515737 ZNF414Q96IQ9 312 aa13.1□□□□□ -0.31
SH3BP2-228ENST00000515737 ZNF586Q9NXT0 402 aa13.1□□□□□ -0.31
SH3BP2-228ENST00000515737 URGCP-MRPS24S4R325 110 aa13.1□□□□□ -0.31
SH3BP2-228ENST00000515737 BRI3O95415 125 aa13.09□□□□□ -0.31
SH3BP2-228ENST00000515737 OCC1Q8TAD7 63 aa13.09□□□□□ -0.31
SH3BP2-228ENST00000515737 TMEM242Q9NWH2 141 aa13.09□□□□□ -0.31
SH3BP2-228ENST00000515737 RABAC1Q9UI14 185 aa13.09□□□□□ -0.31
SH3BP2-228ENST00000515737 PRELID1Q9Y255 219 aa13.09□□□□□ -0.31
SH3BP2-228ENST00000515737 BMPR1BO00238 502 aa13.09□□□□□ -0.31
SH3BP2-228ENST00000515737 HNF1AP20823 631 aa13.09□□□□□ -0.31
SH3BP2-228ENST00000515737 HIST1H2BAQ96A08 127 aa13.09□□□□□ -0.31
SH3BP2-228ENST00000515737 MTORP42345 2549 aa13.09□□□□□ -0.31
SH3BP2-228ENST00000515737 CXorf65A6NEN9 183 aa13.08□□□□□ -0.32
SH3BP2-228ENST00000515737 PPP5D1E7EU14 171 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms