RNA–Protein interactions for RNA: ENST00000513988.1

CLDND1-229, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-229ENST00000513988 RMI2Q96E14 147 aa4.73□□□□□ -1.65
CLDND1-229ENST00000513988 MRPL32Q9BYC8 188 aaKnown RBP4.73□□□□□ -1.65
CLDND1-229ENST00000513988 SLC25A31Q9H0C2 315 aa4.73□□□□□ -1.65
CLDND1-229ENST00000513988 CCL28Q9NRJ3 127 aa4.73□□□□□ -1.65
CLDND1-229ENST00000513988 PSORS1C1Q9UIG5 152 aa4.73□□□□□ -1.65
CLDND1-229ENST00000513988 CORTO00230 105 aa4.72□□□□□ -1.65
CLDND1-229ENST00000513988 KRASP01116 189 aa4.72□□□□□ -1.65
CLDND1-229ENST00000513988 ORM1P02763 201 aa4.72□□□□□ -1.65
CLDND1-229ENST00000513988 SNCAP37840 140 aa4.72□□□□□ -1.65
CLDND1-229ENST00000513988 YPEL3P61236 119 aaPredicted RBP4.72□□□□□ -1.65
CLDND1-229ENST00000513988 RPS11P62280 158 aaKnown RBP eCLIP4.72□□□□□ -1.65
CLDND1-229ENST00000513988 CACNG7P62955 275 aa4.72□□□□□ -1.65
CLDND1-229ENST00000513988 FHL2Q14192 279 aa4.72□□□□□ -1.65
CLDND1-229ENST00000513988 TOR2AQ5JU69 321 aa4.72□□□□□ -1.65
CLDND1-229ENST00000513988 FAM122CQ6P4D5 195 aa4.72□□□□□ -1.65
CLDND1-229ENST00000513988 ZNF664Q8N3J9 261 aa4.72□□□□□ -1.65
CLDND1-229ENST00000513988 OR56B1Q8NGI3 324 aa4.72□□□□□ -1.65
CLDND1-229ENST00000513988 OR1S2Q8NGQ3 325 aa4.72□□□□□ -1.65
CLDND1-229ENST00000513988 OR51H1Q8NH63 302 aa4.72□□□□□ -1.65
CLDND1-229ENST00000513988 IL22RA2Q969J5 263 aa4.72□□□□□ -1.65
CLDND1-229ENST00000513988 C20orf144Q9BQM9 153 aa4.72□□□□□ -1.65
CLDND1-229ENST00000513988 SYNE2Q8WXH0 6885 aaKnown RBP4.72□□□□□ -1.65
CLDND1-229ENST00000513988 FCGBPQ9Y6R7 5405 aaPredicted RBP4.71□□□□□ -1.65
CLDND1-229ENST00000513988 IGKV1D-8A0A087WSZ0 117 aa4.71□□□□□ -1.66
CLDND1-229ENST00000513988 A0A087WYN8 130 aa4.71□□□□□ -1.66
CLDND1-229ENST00000513988 TRGV4A0A0C4DH28 118 aa4.71□□□□□ -1.66
CLDND1-229ENST00000513988 SNTNA6NMZ2 147 aa4.71□□□□□ -1.66
CLDND1-229ENST00000513988 CTXN2P0C2S0 81 aa4.71□□□□□ -1.66
CLDND1-229ENST00000513988 IGLC1P0CG04 106 aa4.71□□□□□ -1.66
CLDND1-229ENST00000513988 TALDO1P37837 337 aa4.71□□□□□ -1.66
CLDND1-229ENST00000513988 TIRAPP58753 221 aa4.71□□□□□ -1.66
CLDND1-229ENST00000513988 HIST1H1AQ02539 215 aaPredicted RBP4.71□□□□□ -1.66
CLDND1-229ENST00000513988 FLOT2Q14254 428 aa4.71□□□□□ -1.66
CLDND1-229ENST00000513988 ZIK1Q3SY52 487 aaPredicted RBP4.71□□□□□ -1.66
CLDND1-229ENST00000513988 C1orf100Q5SVJ3 147 aa4.71□□□□□ -1.66
CLDND1-229ENST00000513988 Q6ZS49 121 aa4.71□□□□□ -1.66
CLDND1-229ENST00000513988 SECTM1Q8WVN6 248 aa4.71□□□□□ -1.66
CLDND1-229ENST00000513988 RNF185Q96GF1 192 aa4.71□□□□□ -1.66
CLDND1-229ENST00000513988 TSC22D3Q99576 134 aa4.71□□□□□ -1.66
CLDND1-229ENST00000513988 GSN-AS1Q9NRJ2 163 aa4.71□□□□□ -1.66
CLDND1-229ENST00000513988 IGKV2D-24A0A075B6R9 120 aa4.7□□□□□ -1.66
CLDND1-229ENST00000513988 IGKV1OR2-108A0A075B7D4 117 aa4.7□□□□□ -1.66
CLDND1-229ENST00000513988 TEX13DA0A0J9YY54 714 aaPredicted RBP4.7□□□□□ -1.66
CLDND1-229ENST00000513988 OR10J1P30954 320 aa4.7□□□□□ -1.66
CLDND1-229ENST00000513988 G6PCP35575 357 aa4.7□□□□□ -1.66
CLDND1-229ENST00000513988 POLR2IP36954 125 aaKnown RBP4.7□□□□□ -1.66
CLDND1-229ENST00000513988 SUB1P53999 127 aaKnown RBP eCLIP4.7□□□□□ -1.66
CLDND1-229ENST00000513988 SUPT4H1P63272 117 aaKnown RBP4.7□□□□□ -1.66
CLDND1-229ENST00000513988 CIRBPQ14011 172 aaKnown RBP4.7□□□□□ -1.66
CLDND1-229ENST00000513988 SPCS2Q15005 226 aa4.7□□□□□ -1.66
CLDND1-229ENST00000513988 P2RY14Q15391 338 aa4.7□□□□□ -1.66
CLDND1-229ENST00000513988 MSMO1Q15800 293 aa4.7□□□□□ -1.66
CLDND1-229ENST00000513988 RNF151Q2KHN1 245 aa4.7□□□□□ -1.66
CLDND1-229ENST00000513988 C1orf194Q5T5A4 169 aa4.7□□□□□ -1.66
CLDND1-229ENST00000513988 AADACL3Q5VUY0 350 aa4.7□□□□□ -1.66
CLDND1-229ENST00000513988 MEDAGQ5VYS4 303 aa4.7□□□□□ -1.66
CLDND1-229ENST00000513988 SH2D6Q7Z4S9 175 aa4.7□□□□□ -1.66
CLDND1-229ENST00000513988 C9orf163Q8N9P6 203 aa4.7□□□□□ -1.66
CLDND1-229ENST00000513988 SLC24A4Q8NFF2 622 aa4.7□□□□□ -1.66
CLDND1-229ENST00000513988 OR51G1Q8NGK1 321 aa4.7□□□□□ -1.66
CLDND1-229ENST00000513988 GTSF1Q8WW33 167 aa4.7□□□□□ -1.66
CLDND1-229ENST00000513988 RAB3CQ96E17 227 aa4.7□□□□□ -1.66
CLDND1-229ENST00000513988 VGLL1Q99990 258 aa4.7□□□□□ -1.66
CLDND1-229ENST00000513988 PBDC1Q9BVG4 233 aa4.7□□□□□ -1.66
CLDND1-229ENST00000513988 DAPK2Q9UIK4 370 aa4.7□□□□□ -1.66
CLDND1-229ENST00000513988 GGTLC3B5MD39 225 aa4.69□□□□□ -1.66
CLDND1-229ENST00000513988 CFC1BP0CG36 223 aa4.69□□□□□ -1.66
CLDND1-229ENST00000513988 RD3LP0DJH9 198 aa4.69□□□□□ -1.66
CLDND1-229ENST00000513988 PRDX6P30041 224 aa4.69□□□□□ -1.66
CLDND1-229ENST00000513988 HSPA13P48723 471 aa4.69□□□□□ -1.66
CLDND1-229ENST00000513988 RND2P52198 227 aa4.69□□□□□ -1.66
CLDND1-229ENST00000513988 ARPC4P59998 168 aa4.69□□□□□ -1.66
CLDND1-229ENST00000513988 FGL1Q08830 312 aa4.69□□□□□ -1.66
CLDND1-229ENST00000513988 DPPA3Q6W0C5 159 aa4.69□□□□□ -1.66
CLDND1-229ENST00000513988 SDIM1Q6ZPB5 146 aa4.69□□□□□ -1.66
CLDND1-229ENST00000513988 DEFB107AQ8IZN7 70 aa4.69□□□□□ -1.66
CLDND1-229ENST00000513988 OR8I2Q8N0Y5 310 aa4.69□□□□□ -1.66
CLDND1-229ENST00000513988 NHLRC2Q8NBF2 726 aa4.69□□□□□ -1.66
CLDND1-229ENST00000513988 ZBTB34Q8NCN2 500 aa4.69□□□□□ -1.66
CLDND1-229ENST00000513988 ZNF738Q8NE65 137 aa4.69□□□□□ -1.66
CLDND1-229ENST00000513988 ZNF680Q8NEM1 530 aa4.69□□□□□ -1.66
CLDND1-229ENST00000513988 TSPAN14Q8NG11 270 aa4.69□□□□□ -1.66
CLDND1-229ENST00000513988 CANT1Q8WVQ1 401 aa4.69□□□□□ -1.66
CLDND1-229ENST00000513988 TRUB1Q8WWH5 349 aaKnown RBP4.69□□□□□ -1.66
CLDND1-229ENST00000513988 ANP32BQ92688 251 aaKnown RBP4.69□□□□□ -1.66
CLDND1-229ENST00000513988 TMA7Q9Y2S6 64 aaKnown RBP4.69□□□□□ -1.66
CLDND1-229ENST00000513988 A0A075B6Q4 140 aa4.68□□□□□ -1.66
CLDND1-229ENST00000513988 ERICH4A6NGS2 130 aa4.68□□□□□ -1.66
CLDND1-229ENST00000513988 TOMM40O96008 361 aa4.68□□□□□ -1.66
CLDND1-229ENST00000513988 LIMS3P0CW19 117 aa4.68□□□□□ -1.66
CLDND1-229ENST00000513988 LIMS4P0CW20 117 aa4.68□□□□□ -1.66
CLDND1-229ENST00000513988 PSMB9P28065 219 aa4.68□□□□□ -1.66
CLDND1-229ENST00000513988 HSPE1P61604 102 aaKnown RBP4.68□□□□□ -1.66
CLDND1-229ENST00000513988 SRSF9Q13242 221 aaKnown RBP eCLIP4.68□□□□□ -1.66
CLDND1-229ENST00000513988 SPINK9Q5DT21 86 aa4.68□□□□□ -1.66
CLDND1-229ENST00000513988 IDNKQ5T6J7 187 aa4.68□□□□□ -1.66
CLDND1-229ENST00000513988 HACD4Q5VWC8 232 aa4.68□□□□□ -1.66
CLDND1-229ENST00000513988 DGAT2L7PQ6IED9 249 aa4.68□□□□□ -1.66
CLDND1-229ENST00000513988 OR8G2PQ6IF36 304 aa4.68□□□□□ -1.66
CLDND1-229ENST00000513988 TMPRSS11AQ6ZMR5 421 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms