RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 ZNF493Q6ZR52 646 aa8.66□□□□□ -1.02
PDLIM5-210ENST00000508216 SLC25A48Q6ZT89 311 aaKnown RBP8.66□□□□□ -1.02
PDLIM5-210ENST00000508216 AMN1Q8IY45 258 aa8.66□□□□□ -1.02
PDLIM5-210ENST00000508216 TMEM167BQ9NRX6 74 aa8.66□□□□□ -1.02
PDLIM5-210ENST00000508216 FAM90A23PA8MXZ1 464 aa8.66□□□□□ -1.02
PDLIM5-210ENST00000508216 J3QQQ9 107 aa8.66□□□□□ -1.02
PDLIM5-210ENST00000508216 TIMM23O14925 209 aa8.66□□□□□ -1.02
PDLIM5-210ENST00000508216 FAM90A15PP0C7V4 464 aa8.66□□□□□ -1.02
PDLIM5-210ENST00000508216 FAM90A13PP0C7W8 464 aa8.66□□□□□ -1.02
PDLIM5-210ENST00000508216 FAM90A14PP0C7W9 464 aa8.66□□□□□ -1.02
PDLIM5-210ENST00000508216 FAM90A24PP0C7X0 464 aa8.66□□□□□ -1.02
PDLIM5-210ENST00000508216 FXYD3Q14802 87 aa8.66□□□□□ -1.02
PDLIM5-210ENST00000508216 IL17RELQ6ZVW7 336 aa8.66□□□□□ -1.02
PDLIM5-210ENST00000508216 SPATA33Q96N06 139 aa8.66□□□□□ -1.02
PDLIM5-210ENST00000508216 TRGV9Q99603 122 aa8.66□□□□□ -1.02
PDLIM5-210ENST00000508216 GOLGA2P5Q9HBQ8 144 aa8.66□□□□□ -1.02
PDLIM5-210ENST00000508216 F11RQ9Y624 299 aaKnown RBP8.66□□□□□ -1.02
PDLIM5-210ENST00000508216 TMEM202A6NGA9 273 aa8.65□□□□□ -1.02
PDLIM5-210ENST00000508216 NDUFC2-KCTD14E9PQ53 114 aa8.65□□□□□ -1.02
PDLIM5-210ENST00000508216 ACTL6BO94805 426 aa8.65□□□□□ -1.02
PDLIM5-210ENST00000508216 TRACP01848 142 aa8.65□□□□□ -1.02
PDLIM5-210ENST00000508216 UBE2D1P51668 147 aa8.65□□□□□ -1.02
PDLIM5-210ENST00000508216 SPANXN5Q5MJ07 72 aa8.65□□□□□ -1.02
PDLIM5-210ENST00000508216 ZNF818PQ6ZRF7 136 aa8.65□□□□□ -1.02
PDLIM5-210ENST00000508216 RNF144BQ7Z419 303 aa8.65□□□□□ -1.02
PDLIM5-210ENST00000508216 MDS2Q8NDY4 140 aa8.65□□□□□ -1.02
PDLIM5-210ENST00000508216 ZNF414Q96IQ9 312 aa8.65□□□□□ -1.02
PDLIM5-210ENST00000508216 HDHD3Q9BSH5 251 aaPredicted RBP8.65□□□□□ -1.02
PDLIM5-210ENST00000508216 AICDAQ9GZX7 198 aa8.65□□□□□ -1.02
PDLIM5-210ENST00000508216 CACNG5Q9UF02 275 aa8.65□□□□□ -1.02
PDLIM5-210ENST00000508216 IGKV1-9A0A0C4DH69 117 aa8.64□□□□□ -1.03
PDLIM5-210ENST00000508216 OXTP01178 125 aa8.64□□□□□ -1.03
PDLIM5-210ENST00000508216 IGLV3-1P01715 115 aa8.64□□□□□ -1.03
PDLIM5-210ENST00000508216 IAPPP10997 89 aa8.64□□□□□ -1.03
PDLIM5-210ENST00000508216 ZNF823P16415 610 aa8.64□□□□□ -1.03
PDLIM5-210ENST00000508216 CXCL5P42830 114 aa8.64□□□□□ -1.03
PDLIM5-210ENST00000508216 RPS18P62269 152 aaKnown RBP8.64□□□□□ -1.03
PDLIM5-210ENST00000508216 TFF3Q07654 80 aa8.64□□□□□ -1.03
PDLIM5-210ENST00000508216 DEFB121Q5J5C9 76 aa8.64□□□□□ -1.03
PDLIM5-210ENST00000508216 IFI27L1Q96BM0 104 aa8.64□□□□□ -1.03
PDLIM5-210ENST00000508216 C2orf48Q96LS8 159 aa8.64□□□□□ -1.03
PDLIM5-210ENST00000508216 RNF181Q9P0P0 153 aa8.64□□□□□ -1.03
PDLIM5-210ENST00000508216 TCF20Q9UGU0 1960 aaKnown RBP8.63□□□□□ -1.03
PDLIM5-210ENST00000508216 IGHV3OR15-7A0A075B7D8 119 aa8.63□□□□□ -1.03
PDLIM5-210ENST00000508216 LOC101059948A0A1B0GTJ6 334 aa8.63□□□□□ -1.03
PDLIM5-210ENST00000508216 CLDN14O95500 239 aa8.63□□□□□ -1.03
PDLIM5-210ENST00000508216 LTAP01374 205 aa8.63□□□□□ -1.03
PDLIM5-210ENST00000508216 CD3EP07766 207 aa8.63□□□□□ -1.03
PDLIM5-210ENST00000508216 PRDX2P32119 198 aa8.63□□□□□ -1.03
PDLIM5-210ENST00000508216 PFN2P35080 140 aa8.63□□□□□ -1.03
PDLIM5-210ENST00000508216 EMDP50402 254 aa8.63□□□□□ -1.03
PDLIM5-210ENST00000508216 FOXA3P55318 350 aaPredicted RBP8.63□□□□□ -1.03
PDLIM5-210ENST00000508216 FBXW4P57775 412 aa8.63□□□□□ -1.03
PDLIM5-210ENST00000508216 Q6ZR03 302 aa8.63□□□□□ -1.03
PDLIM5-210ENST00000508216 Q6ZRM9 215 aa8.63□□□□□ -1.03
PDLIM5-210ENST00000508216 SFTPA2Q8IWL1 248 aa8.63□□□□□ -1.03
PDLIM5-210ENST00000508216 SFTPA1Q8IWL2 248 aa8.63□□□□□ -1.03
PDLIM5-210ENST00000508216 EPDR1Q9UM22 224 aa8.63□□□□□ -1.03
PDLIM5-210ENST00000508216 FREM3P0C091 2139 aa8.63□□□□□ -1.03
PDLIM5-210ENST00000508216 A0A096LNJ9 63 aa8.63□□□□□ -1.03
PDLIM5-210ENST00000508216 TRAV8-1A0A0A6YYK1 113 aa8.63□□□□□ -1.03
PDLIM5-210ENST00000508216 A0A0J9YW62 118 aa8.63□□□□□ -1.03
PDLIM5-210ENST00000508216 LGALS9O00182 355 aa8.63□□□□□ -1.03
PDLIM5-210ENST00000508216 CTLA4P16410 223 aa8.63□□□□□ -1.03
PDLIM5-210ENST00000508216 COL8A2P25067 703 aa8.63□□□□□ -1.03
PDLIM5-210ENST00000508216 NBL1P41271 181 aa8.63□□□□□ -1.03
PDLIM5-210ENST00000508216 AAED1Q7RTV5 226 aa8.63□□□□□ -1.03
PDLIM5-210ENST00000508216 FAM19A1Q7Z5A9 133 aa8.63□□□□□ -1.03
PDLIM5-210ENST00000508216 FGFRL1Q8N441 504 aa8.63□□□□□ -1.03
PDLIM5-210ENST00000508216 C3orf56Q8N813 242 aa8.63□□□□□ -1.03
PDLIM5-210ENST00000508216 DCAF4L2Q8NA75 395 aa8.63□□□□□ -1.03
PDLIM5-210ENST00000508216 HHLA3Q9XRX5 114 aa8.63□□□□□ -1.03
PDLIM5-210ENST00000508216 A0A1W2PP55 124 aa8.62□□□□□ -1.03
PDLIM5-210ENST00000508216 C19orf71A6NCJ1 209 aa8.62□□□□□ -1.03
PDLIM5-210ENST00000508216 HIGD1CA8MV81 97 aa8.62□□□□□ -1.03
PDLIM5-210ENST00000508216 CHEK1O14757 476 aa8.62□□□□□ -1.03
PDLIM5-210ENST00000508216 SLC25A20O43772 301 aa8.62□□□□□ -1.03
PDLIM5-210ENST00000508216 IGKCP01834 107 aa8.62□□□□□ -1.03
PDLIM5-210ENST00000508216 ACYP1P07311 99 aa8.62□□□□□ -1.03
PDLIM5-210ENST00000508216 P0DMU3 169 aa8.62□□□□□ -1.03
PDLIM5-210ENST00000508216 FAM231AP0DMU4 169 aa8.62□□□□□ -1.03
PDLIM5-210ENST00000508216 FAM231CP0DMU5 169 aa8.62□□□□□ -1.03
PDLIM5-210ENST00000508216 CACNG7P62955 275 aa8.62□□□□□ -1.03
PDLIM5-210ENST00000508216 RNF44Q7L0R7 432 aa8.62□□□□□ -1.03
PDLIM5-210ENST00000508216 C1orf158Q8N1D5 194 aa8.62□□□□□ -1.03
PDLIM5-210ENST00000508216 Q8N1Y9 231 aa8.62□□□□□ -1.03
PDLIM5-210ENST00000508216 TMEM52Q8NDY8 209 aa8.62□□□□□ -1.03
PDLIM5-210ENST00000508216 FOXQ1Q9C009 403 aa8.62□□□□□ -1.03
PDLIM5-210ENST00000508216 SHANK1Q9Y566 2161 aa8.62□□□□□ -1.03
PDLIM5-210ENST00000508216 KLK10O43240 276 aa8.61□□□□□ -1.03
PDLIM5-210ENST00000508216 PSMB2P49721 201 aa8.61□□□□□ -1.03
PDLIM5-210ENST00000508216 HIST1H4AP62805 103 aaKnown RBP8.61□□□□□ -1.03
PDLIM5-210ENST00000508216 KRTAP27-1Q3LI81 207 aa8.61□□□□□ -1.03
PDLIM5-210ENST00000508216 C11orf53Q8IXP5 236 aa8.61□□□□□ -1.03
PDLIM5-210ENST00000508216 ZNF441Q8N8Z8 693 aa8.61□□□□□ -1.03
PDLIM5-210ENST00000508216 SPACA5Q96QH8 159 aa8.61□□□□□ -1.03
PDLIM5-210ENST00000508216 SHANK2-AS3Q9BTD1 123 aa8.61□□□□□ -1.03
PDLIM5-210ENST00000508216 MRPL20Q9BYC9 149 aaKnown RBP8.61□□□□□ -1.03
PDLIM5-210ENST00000508216 KLK5Q9Y337 293 aaPredicted RBP8.61□□□□□ -1.03
PDLIM5-210ENST00000508216 TRAV17A0A0B4J275 112 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms