RNA–Protein interactions for RNA: ENST00000494412.1

CMSS1-207, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 2

Gene CMSS1, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-207ENST00000494412 ABCA12Q86UK0 2595 aa2.1□□□□□ -2.07
CMSS1-207ENST00000494412 GVINP1Q7Z2Y8 2422 aa2.1□□□□□ -2.07
CMSS1-207ENST00000494412 ANKRD50Q9ULJ7 1429 aa2.1□□□□□ -2.07
CMSS1-207ENST00000494412 DCHS1Q96JQ0 3298 aa2.1□□□□□ -2.07
CMSS1-207ENST00000494412 MRC1P22897 1456 aa2.1□□□□□ -2.07
CMSS1-207ENST00000494412 TRAV7A0A075B6U4 112 aa2.1□□□□□ -2.07
CMSS1-207ENST00000494412 RFPL4AA6NLU0 287 aa2.1□□□□□ -2.07
CMSS1-207ENST00000494412 CLDN25C9JDP6 229 aa2.1□□□□□ -2.07
CMSS1-207ENST00000494412 RFPL4AL1F8VTS6 287 aa2.1□□□□□ -2.07
CMSS1-207ENST00000494412 PGRMC1O00264 195 aaKnown RBP2.1□□□□□ -2.07
CMSS1-207ENST00000494412 SLC22A1O15245 554 aa2.1□□□□□ -2.07
CMSS1-207ENST00000494412 IFNA1P01562 189 aa2.1□□□□□ -2.07
CMSS1-207ENST00000494412 PPBPP02775 128 aa2.1□□□□□ -2.07
CMSS1-207ENST00000494412 MSMBP08118 114 aa2.1□□□□□ -2.07
CMSS1-207ENST00000494412 OR4E1P0C645 316 aa2.1□□□□□ -2.07
CMSS1-207ENST00000494412 EVX1P49640 407 aa2.1□□□□□ -2.07
CMSS1-207ENST00000494412 EIF2B2P49770 351 aaKnown RBP2.1□□□□□ -2.07
CMSS1-207ENST00000494412 TAS2R41P59536 307 aa2.1□□□□□ -2.07
CMSS1-207ENST00000494412 TRIQKQ629K1 86 aa2.1□□□□□ -2.07
CMSS1-207ENST00000494412 Q6Q795 121 aa2.1□□□□□ -2.07
CMSS1-207ENST00000494412 LYZL1Q6UWQ5 148 aa2.1□□□□□ -2.07
CMSS1-207ENST00000494412 TCF24Q7RTU0 167 aa2.1□□□□□ -2.07
CMSS1-207ENST00000494412 OR4X2Q8NGF9 303 aa2.1□□□□□ -2.07
CMSS1-207ENST00000494412 FAM172AQ8WUF8 416 aa2.1□□□□□ -2.07
CMSS1-207ENST00000494412 DNAJC9Q8WXX5 260 aa2.1□□□□□ -2.07
CMSS1-207ENST00000494412 NDUFB11Q9NX14 153 aa2.1□□□□□ -2.07
CMSS1-207ENST00000494412 TVP23BQ9NYZ1 205 aa2.1□□□□□ -2.07
CMSS1-207ENST00000494412 PYCARDQ9ULZ3 195 aa2.1□□□□□ -2.07
CMSS1-207ENST00000494412 BPTFQ12830 3046 aa2.1□□□□□ -2.07
CMSS1-207ENST00000494412 MYH11P35749 1972 aa2.1□□□□□ -2.07
CMSS1-207ENST00000494412 LTBP2Q14767 1821 aa2.1□□□□□ -2.07
CMSS1-207ENST00000494412 COL4A5P29400 1685 aa2.09□□□□□ -2.07
CMSS1-207ENST00000494412 TJP1Q07157 1748 aa2.09□□□□□ -2.07
CMSS1-207ENST00000494412 ANKRD26Q9UPS8 1709 aa2.09□□□□□ -2.07
CMSS1-207ENST00000494412 DOPEY1Q5JWR5 2465 aa2.09□□□□□ -2.07
CMSS1-207ENST00000494412 TRAV41A0A0B4J266 112 aa2.09□□□□□ -2.07
CMSS1-207ENST00000494412 MUC21A0A0G2JKD1 596 aa2.09□□□□□ -2.07
CMSS1-207ENST00000494412 MUC21A0A140T8X8 626 aa2.09□□□□□ -2.07
CMSS1-207ENST00000494412 SIGLEC16A6NMB1 481 aa2.09□□□□□ -2.07
CMSS1-207ENST00000494412 H7C2G1 150 aa2.09□□□□□ -2.07
CMSS1-207ENST00000494412 CSRP1P21291 193 aaKnown RBP2.09□□□□□ -2.07
CMSS1-207ENST00000494412 RPS4Y1P22090 263 aaKnown RBP2.09□□□□□ -2.07
CMSS1-207ENST00000494412 EMP1P54849 157 aa2.09□□□□□ -2.07
CMSS1-207ENST00000494412 RHOBP62745 196 aa2.09□□□□□ -2.07
CMSS1-207ENST00000494412 TNFRSF9Q07011 255 aa2.09□□□□□ -2.07
CMSS1-207ENST00000494412 KISS1Q15726 138 aa2.09□□□□□ -2.07
CMSS1-207ENST00000494412 SPANXN3Q5MJ09 141 aa2.09□□□□□ -2.07
CMSS1-207ENST00000494412 OR13C6PQ8NH95 151 aa2.09□□□□□ -2.07
CMSS1-207ENST00000494412 GPR146Q96CH1 333 aa2.09□□□□□ -2.07
CMSS1-207ENST00000494412 TRABDQ9H4I3 376 aa2.09□□□□□ -2.07
CMSS1-207ENST00000494412 PARVBQ9HBI1 364 aa2.09□□□□□ -2.07
CMSS1-207ENST00000494412 SLC39A9Q9NUM3 307 aa2.09□□□□□ -2.07
CMSS1-207ENST00000494412 HELZ2Q9BYK8 2649 aaKnown RBP2.09□□□□□ -2.08
CMSS1-207ENST00000494412 HECTD1Q9ULT8 2610 aa2.09□□□□□ -2.08
CMSS1-207ENST00000494412 ITPR3Q14573 2671 aa2.09□□□□□ -2.08
CMSS1-207ENST00000494412 ZNF106Q9H2Y7 1883 aaKnown RBP2.09□□□□□ -2.08
CMSS1-207ENST00000494412 NOTCH2Q04721 2471 aa2.09□□□□□ -2.08
CMSS1-207ENST00000494412 PLXND1Q9Y4D7 1925 aa2.09□□□□□ -2.08
CMSS1-207ENST00000494412 COL4A4P53420 1690 aaPredicted RBP2.09□□□□□ -2.08
CMSS1-207ENST00000494412 SMG6Q86US8 1419 aaKnown RBP2.08□□□□□ -2.08
CMSS1-207ENST00000494412 FAM186AA6NE01 2351 aa2.08□□□□□ -2.08
CMSS1-207ENST00000494412 AFDNP55196 1824 aaKnown RBP2.08□□□□□ -2.08
CMSS1-207ENST00000494412 G3V2T6 193 aa2.08□□□□□ -2.08
CMSS1-207ENST00000494412 C3orf84H3BNL1 204 aa2.08□□□□□ -2.08
CMSS1-207ENST00000494412 TRAPPC2LH3BP13 241 aa2.08□□□□□ -2.08
CMSS1-207ENST00000494412 BUB1B-PAK6H3BSN5 160 aa2.08□□□□□ -2.08
CMSS1-207ENST00000494412 CIAO1O76071 339 aa2.08□□□□□ -2.08
CMSS1-207ENST00000494412 CASP1P29466 404 aa2.08□□□□□ -2.08
CMSS1-207ENST00000494412 ZNF80P51504 273 aaPredicted RBP2.08□□□□□ -2.08
CMSS1-207ENST00000494412 CRYBA4P53673 196 aa2.08□□□□□ -2.08
CMSS1-207ENST00000494412 GNG3P63215 75 aa2.08□□□□□ -2.08
CMSS1-207ENST00000494412 ERHP84090 104 aaKnown RBP2.08□□□□□ -2.08
CMSS1-207ENST00000494412 DR1Q01658 176 aa2.08□□□□□ -2.08
CMSS1-207ENST00000494412 ZNF90Q03938 601 aa2.08□□□□□ -2.08
CMSS1-207ENST00000494412 CLVS1Q8IUQ0 354 aaPredicted RBP2.08□□□□□ -2.08
CMSS1-207ENST00000494412 SMIM20Q8N5G0 67 aa2.08□□□□□ -2.08
CMSS1-207ENST00000494412 RPP25LQ8N5L8 163 aaKnown RBP2.08□□□□□ -2.08
CMSS1-207ENST00000494412 RASSF5Q8WWW0 418 aa2.08□□□□□ -2.08
CMSS1-207ENST00000494412 C2orf50Q96LR7 162 aa2.08□□□□□ -2.08
CMSS1-207ENST00000494412 Q9BRP9 147 aa2.08□□□□□ -2.08
CMSS1-207ENST00000494412 MED29Q9NX70 200 aa2.08□□□□□ -2.08
CMSS1-207ENST00000494412 SS18L2Q9UHA2 77 aa2.08□□□□□ -2.08
CMSS1-207ENST00000494412 UFC1Q9Y3C8 167 aa2.08□□□□□ -2.08
CMSS1-207ENST00000494412 ALPK3Q96L96 1907 aa2.08□□□□□ -2.08
CMSS1-207ENST00000494412 SMG1Q96Q15 3661 aaKnown RBP2.08□□□□□ -2.08
CMSS1-207ENST00000494412 CACNA1HO95180 2353 aa2.08□□□□□ -2.08
CMSS1-207ENST00000494412 MYO9AB2RTY4 2548 aa2.08□□□□□ -2.08
CMSS1-207ENST00000494412 MYO9BQ13459 2157 aa2.08□□□□□ -2.08
CMSS1-207ENST00000494412 FAM208AQ9UK61 1670 aaKnown RBP2.07□□□□□ -2.08
CMSS1-207ENST00000494412 IGHV3-64A0A075B6Q5 118 aa2.07□□□□□ -2.08
CMSS1-207ENST00000494412 IGHV1-18A0A0C4DH31 117 aa2.07□□□□□ -2.08
CMSS1-207ENST00000494412 OR2J2O76002 312 aa2.07□□□□□ -2.08
CMSS1-207ENST00000494412 LGALS3P17931 250 aaKnown RBP2.07□□□□□ -2.08
CMSS1-207ENST00000494412 S100A4P26447 101 aaKnown RBP2.07□□□□□ -2.08
CMSS1-207ENST00000494412 ATP5G3P48201 142 aa2.07□□□□□ -2.08
CMSS1-207ENST00000494412 TMEM258P61165 79 aa2.07□□□□□ -2.08
CMSS1-207ENST00000494412 NCALDP61601 193 aa2.07□□□□□ -2.08
CMSS1-207ENST00000494412 SUPT4H1P63272 117 aaKnown RBP2.07□□□□□ -2.08
CMSS1-207ENST00000494412 RHEBQ15382 184 aa2.07□□□□□ -2.08
CMSS1-207ENST00000494412 DYNAPQ8N1N2 210 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms