RNA–Protein interactions for RNA: ENST00000493232.5

BRAT1-206, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,360 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-206ENST00000493232 SIGLEC9Q9Y336 463 aa13.35□□□□□ -0.27
BRAT1-206ENST00000493232 LY96Q9Y6Y9 160 aa13.35□□□□□ -0.27
BRAT1-206ENST00000493232 HOXA3O43365 443 aaPredicted RBP13.34□□□□□ -0.27
BRAT1-206ENST00000493232 SPATA31B1PQ5VZV4 182 aa13.34□□□□□ -0.27
BRAT1-206ENST00000493232 LINC01356Q8N9X3 169 aa13.34□□□□□ -0.27
BRAT1-206ENST00000493232 AGMATQ9BSE5 352 aa13.34□□□□□ -0.27
BRAT1-206ENST00000493232 NDUFS8O00217 210 aa13.34□□□□□ -0.27
BRAT1-206ENST00000493232 HIST1H2BKO60814 126 aa13.34□□□□□ -0.27
BRAT1-206ENST00000493232 HIST1H2BJP06899 126 aa13.34□□□□□ -0.27
BRAT1-206ENST00000493232 HIST1H2BOP23527 126 aa13.34□□□□□ -0.27
BRAT1-206ENST00000493232 HIST1H2BBP33778 126 aa13.34□□□□□ -0.27
BRAT1-206ENST00000493232 HIST1H2BDP58876 126 aa13.34□□□□□ -0.27
BRAT1-206ENST00000493232 HIST1H2BCP62807 126 aa13.34□□□□□ -0.27
BRAT1-206ENST00000493232 HIST2H2BEQ16778 126 aa13.34□□□□□ -0.27
BRAT1-206ENST00000493232 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.34□□□□□ -0.27
BRAT1-206ENST00000493232 HIST1H2BHQ93079 126 aa13.34□□□□□ -0.27
BRAT1-206ENST00000493232 HIST1H2BNQ99877 126 aa13.34□□□□□ -0.27
BRAT1-206ENST00000493232 HIST1H2BMQ99879 126 aa13.34□□□□□ -0.27
BRAT1-206ENST00000493232 UBE2DNLQ8IWF7 75 aa13.34□□□□□ -0.27
BRAT1-206ENST00000493232 EXOC3-AS1Q8N2X6 119 aa13.34□□□□□ -0.27
BRAT1-206ENST00000493232 RNF166Q96A37 237 aaPredicted RBP13.34□□□□□ -0.27
BRAT1-206ENST00000493232 GVINP1Q7Z2Y8 2422 aa13.34□□□□□ -0.27
BRAT1-206ENST00000493232 SRRM4A7MD48 611 aaKnown RBP13.34□□□□□ -0.27
BRAT1-206ENST00000493232 CA1P00915 261 aaPredicted RBP13.34□□□□□ -0.27
BRAT1-206ENST00000493232 NYNRINQ9P2P1 1898 aaKnown RBP13.33□□□□□ -0.27
BRAT1-206ENST00000493232 BRD3OSQ6XYD6 125 aa13.33□□□□□ -0.27
BRAT1-206ENST00000493232 PIP4P2Q8N4L2 257 aa13.33□□□□□ -0.27
BRAT1-206ENST00000493232 WFDC12Q8WWY7 111 aa13.33□□□□□ -0.27
BRAT1-206ENST00000493232 NDUFAF3Q9BU61 184 aa13.33□□□□□ -0.27
BRAT1-206ENST00000493232 MS4A6AQ9H2W1 248 aa13.33□□□□□ -0.27
BRAT1-206ENST00000493232 A0A1B0GV72 72 aa13.33□□□□□ -0.28
BRAT1-206ENST00000493232 SEC11AP67812 179 aa13.33□□□□□ -0.28
BRAT1-206ENST00000493232 PHLDA1Q8WV24 401 aaPredicted RBP13.33□□□□□ -0.28
BRAT1-206ENST00000493232 MSRB2Q9Y3D2 182 aa13.33□□□□□ -0.28
BRAT1-206ENST00000493232 IGKV1D-17A0A075B6S4 117 aa13.33□□□□□ -0.28
BRAT1-206ENST00000493232 CKS1BP61024 79 aa13.33□□□□□ -0.28
BRAT1-206ENST00000493232 ORAOV1Q8WV07 137 aa13.33□□□□□ -0.28
BRAT1-206ENST00000493232 DPH3P1Q9H4G8 78 aa13.33□□□□□ -0.28
BRAT1-206ENST00000493232 INTS1Q8N201 2190 aaKnown RBP13.32□□□□□ -0.28
BRAT1-206ENST00000493232 TMEM238C9JI98 176 aa13.32□□□□□ -0.28
BRAT1-206ENST00000493232 FNDC10F2Z333 226 aa13.32□□□□□ -0.28
BRAT1-206ENST00000493232 TOMM40O96008 361 aa13.32□□□□□ -0.28
BRAT1-206ENST00000493232 TRAV3A0A0B4J244 114 aa13.32□□□□□ -0.28
BRAT1-206ENST00000493232 TMEM95Q3KNT9 176 aa13.32□□□□□ -0.28
BRAT1-206ENST00000493232 CYTL1Q9NRR1 136 aa13.32□□□□□ -0.28
BRAT1-206ENST00000493232 DICER1Q9UPY3 1922 aaKnown RBP13.32□□□□□ -0.28
BRAT1-206ENST00000493232 LINC00158P58513 81 aa13.32□□□□□ -0.28
BRAT1-206ENST00000493232 PLEKHB2Q96CS7 222 aa13.32□□□□□ -0.28
BRAT1-206ENST00000493232 RNF114Q9Y508 228 aa13.32□□□□□ -0.28
BRAT1-206ENST00000493232 RFNGQ9Y644 331 aa13.32□□□□□ -0.28
BRAT1-206ENST00000493232 INSP01308 110 aa13.32□□□□□ -0.28
BRAT1-206ENST00000493232 HSD52Q0P140 79 aa13.32□□□□□ -0.28
BRAT1-206ENST00000493232 TRAV8-2A0A0B4J237 113 aa13.31□□□□□ -0.28
BRAT1-206ENST00000493232 ITGB1BP1O14713 200 aa13.31□□□□□ -0.28
BRAT1-206ENST00000493232 IGHV4-39P01824 125 aa13.31□□□□□ -0.28
BRAT1-206ENST00000493232 ZNF876PQ49A33 203 aa13.31□□□□□ -0.28
BRAT1-206ENST00000493232 S100A7L2Q5SY68 101 aa13.31□□□□□ -0.28
BRAT1-206ENST00000493232 GREB1Q4ZG55 1949 aa13.31□□□□□ -0.28
BRAT1-206ENST00000493232 GGTLC3B5MD39 225 aa13.31□□□□□ -0.28
BRAT1-206ENST00000493232 PRTN3P24158 256 aa13.31□□□□□ -0.28
BRAT1-206ENST00000493232 SPOCK3Q9BQ16 436 aa13.31□□□□□ -0.28
BRAT1-206ENST00000493232 CLDN16Q9Y5I7 305 aa13.31□□□□□ -0.28
BRAT1-206ENST00000493232 TRGV1A0A0A0MS02 117 aa13.31□□□□□ -0.28
BRAT1-206ENST00000493232 GATA3P23771 443 aa13.31□□□□□ -0.28
BRAT1-206ENST00000493232 CD300EQ496F6 205 aaPredicted RBP13.31□□□□□ -0.28
BRAT1-206ENST00000493232 ZNF474Q6S9Z5 364 aaPredicted RBP13.31□□□□□ -0.28
BRAT1-206ENST00000493232 LYZL1Q6UWQ5 148 aa13.31□□□□□ -0.28
BRAT1-206ENST00000493232 PSG3Q16557 428 aa13.31□□□□□ -0.28
BRAT1-206ENST00000493232 SDK2Q58EX2 2172 aa13.31□□□□□ -0.28
BRAT1-206ENST00000493232 RPP25LQ8N5L8 163 aaKnown RBP13.31□□□□□ -0.28
BRAT1-206ENST00000493232 VCYO14598 125 aa13.31□□□□□ -0.28
BRAT1-206ENST00000493232 LINC01551Q86U37 167 aa13.31□□□□□ -0.28
BRAT1-206ENST00000493232 TRAV12-3A0A0B4J271 114 aa13.3□□□□□ -0.28
BRAT1-206ENST00000493232 LINC00473A8K010 186 aa13.3□□□□□ -0.28
BRAT1-206ENST00000493232 GZMBP10144 247 aa13.3□□□□□ -0.28
BRAT1-206ENST00000493232 QRFPP83859 136 aa13.3□□□□□ -0.28
BRAT1-206ENST00000493232 DMRTA1Q5VZB9 504 aa13.3□□□□□ -0.28
BRAT1-206ENST00000493232 CEP250Q9BV73 2442 aa13.3□□□□□ -0.28
BRAT1-206ENST00000493232 D6R8Y8 96 aa13.3□□□□□ -0.28
BRAT1-206ENST00000493232 SH2D1AO60880 128 aa13.3□□□□□ -0.28
BRAT1-206ENST00000493232 LCN12Q6JVE5 192 aa13.3□□□□□ -0.28
BRAT1-206ENST00000493232 KLHL30-AS1Q8NEE0 82 aa13.3□□□□□ -0.28
BRAT1-206ENST00000493232 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.3□□□□□ -0.28
BRAT1-206ENST00000493232 TDGF1P3P51864 188 aa13.3□□□□□ -0.28
BRAT1-206ENST00000493232 ACTL10Q5JWF8 245 aa13.3□□□□□ -0.28
BRAT1-206ENST00000493232 RASL10AQ92737 203 aa13.3□□□□□ -0.28
BRAT1-206ENST00000493232 KLF17Q5JT82 389 aaPredicted RBP13.29□□□□□ -0.28
BRAT1-206ENST00000493232 TEX43Q6ZNM6 134 aa13.29□□□□□ -0.28
BRAT1-206ENST00000493232 M0R2P5 195 aa13.29□□□□□ -0.28
BRAT1-206ENST00000493232 COL8A2P25067 703 aa13.29□□□□□ -0.28
BRAT1-206ENST00000493232 ASCL4Q6XD76 172 aa13.29□□□□□ -0.28
BRAT1-206ENST00000493232 EP300Q09472 2414 aaPredicted RBP13.29□□□□□ -0.28
BRAT1-206ENST00000493232 ATXN8Q156A1 80 aa13.29□□□□□ -0.28
BRAT1-206ENST00000493232 LHFPL4Q7Z7J7 247 aa13.29□□□□□ -0.28
BRAT1-206ENST00000493232 KLHDC3Q9BQ90 382 aa13.29□□□□□ -0.28
BRAT1-206ENST00000493232 C5orf63A6NC05 138 aa13.29□□□□□ -0.28
BRAT1-206ENST00000493232 UBE2CO00762 179 aa13.29□□□□□ -0.28
BRAT1-206ENST00000493232 FCN3O75636 299 aa13.29□□□□□ -0.28
BRAT1-206ENST00000493232 BPESC1Q9GZL8 116 aa13.29□□□□□ -0.28
BRAT1-206ENST00000493232 DERL1Q9BUN8 251 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms