RNA–Protein interactions for RNA: ENST00000490993.5

NPHP3-208, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 5,197 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-208ENST00000490993 TTC9CQ8N5M4 171 aa5.88□□□□□ -1.47
NPHP3-208ENST00000490993 ST6GALNAC6Q969X2 333 aa5.88□□□□□ -1.47
NPHP3-208ENST00000490993 CSN3P07498 182 aa5.87□□□□□ -1.47
NPHP3-208ENST00000490993 FAM231DQ6ZW35 169 aa5.87□□□□□ -1.47
NPHP3-208ENST00000490993 PRORYQ9H606 182 aa5.87□□□□□ -1.47
NPHP3-208ENST00000490993 ZNF492Q9P255 531 aa5.87□□□□□ -1.47
NPHP3-208ENST00000490993 M0R143 59 aa5.87□□□□□ -1.47
NPHP3-208ENST00000490993 KIAA1644Q3SXP7 199 aa5.87□□□□□ -1.47
NPHP3-208ENST00000490993 HIST1H2BLQ99880 126 aa5.87□□□□□ -1.47
NPHP3-208ENST00000490993 ASCL2Q99929 193 aa5.87□□□□□ -1.47
NPHP3-208ENST00000490993 GFRA4Q9GZZ7 299 aa5.87□□□□□ -1.47
NPHP3-208ENST00000490993 USMG5Q96IX5 58 aa5.87□□□□□ -1.47
NPHP3-208ENST00000490993 CHD9Q3L8U1 2897 aa5.87□□□□□ -1.47
NPHP3-208ENST00000490993 TTC28Q96AY4 2481 aa5.87□□□□□ -1.47
NPHP3-208ENST00000490993 HOXB4P17483 251 aaPredicted RBP5.87□□□□□ -1.47
NPHP3-208ENST00000490993 TM4SF20Q53R12 229 aa5.87□□□□□ -1.47
NPHP3-208ENST00000490993 CT83Q5H943 113 aa5.87□□□□□ -1.47
NPHP3-208ENST00000490993 SPANXN1Q5VSR9 72 aa5.87□□□□□ -1.47
NPHP3-208ENST00000490993 FNDC4Q9H6D8 234 aaPredicted RBP5.87□□□□□ -1.47
NPHP3-208ENST00000490993 ARHGAP21Q5T5U3 1957 aa5.86□□□□□ -1.47
NPHP3-208ENST00000490993 IGHV1-69DA0A0B4J2H0 117 aa5.86□□□□□ -1.47
NPHP3-208ENST00000490993 IGHV1-69P01742 117 aa5.86□□□□□ -1.47
NPHP3-208ENST00000490993 IGLC1P0CG04 106 aa5.86□□□□□ -1.47
NPHP3-208ENST00000490993 PAX8Q06710 450 aa5.86□□□□□ -1.47
NPHP3-208ENST00000490993 JOSD1Q15040 202 aaPredicted RBP5.86□□□□□ -1.47
NPHP3-208ENST00000490993 NEU1Q99519 415 aa5.86□□□□□ -1.47
NPHP3-208ENST00000490993 GSX1Q9H4S2 264 aaPredicted RBP5.86□□□□□ -1.47
NPHP3-208ENST00000490993 GSN-AS1Q9NRJ2 163 aa5.86□□□□□ -1.47
NPHP3-208ENST00000490993 UFC1Q9Y3C8 167 aa5.86□□□□□ -1.47
NPHP3-208ENST00000490993 CHD7Q9P2D1 2997 aa5.86□□□□□ -1.47
NPHP3-208ENST00000490993 FAM231BA6NCW3 169 aa5.86□□□□□ -1.47
NPHP3-208ENST00000490993 GGTLC3B5MD39 225 aa5.86□□□□□ -1.47
NPHP3-208ENST00000490993 G0S2P27469 103 aa5.86□□□□□ -1.47
NPHP3-208ENST00000490993 CKS2P33552 79 aa5.86□□□□□ -1.47
NPHP3-208ENST00000490993 EBLN2Q6P2I7 272 aa5.86□□□□□ -1.47
NPHP3-208ENST00000490993 TMEM75Q8N9X5 138 aa5.86□□□□□ -1.47
NPHP3-208ENST00000490993 FABP5P3A8MUU1 101 aa5.86□□□□□ -1.47
NPHP3-208ENST00000490993 DDTP30046 118 aa5.86□□□□□ -1.47
NPHP3-208ENST00000490993 PSG3Q16557 428 aa5.86□□□□□ -1.47
NPHP3-208ENST00000490993 TCF24Q7RTU0 167 aa5.86□□□□□ -1.47
NPHP3-208ENST00000490993 IGHV3-35A0A0C4DH35 117 aa5.86□□□□□ -1.47
NPHP3-208ENST00000490993 H3BRN7 92 aa5.86□□□□□ -1.47
NPHP3-208ENST00000490993 LEPROTL1O95214 131 aa5.86□□□□□ -1.47
NPHP3-208ENST00000490993 TGFAP01135 160 aa5.86□□□□□ -1.47
NPHP3-208ENST00000490993 PLP1P60201 277 aa5.86□□□□□ -1.47
NPHP3-208ENST00000490993 KLF17Q5JT82 389 aaPredicted RBP5.86□□□□□ -1.47
NPHP3-208ENST00000490993 LY6G5BQ8NDX9 201 aa5.86□□□□□ -1.47
NPHP3-208ENST00000490993 FXYD5Q96DB9 178 aa5.86□□□□□ -1.47
NPHP3-208ENST00000490993 PRSS46E5RG02 174 aa5.85□□□□□ -1.47
NPHP3-208ENST00000490993 LBHQ53QV2 105 aaPredicted RBP5.85□□□□□ -1.47
NPHP3-208ENST00000490993 ITLN2Q8WWU7 325 aaPredicted RBP5.85□□□□□ -1.47
NPHP3-208ENST00000490993 PYGO2Q9BRQ0 406 aa5.85□□□□□ -1.47
NPHP3-208ENST00000490993 ICE1Q9Y2F5 2266 aa5.85□□□□□ -1.47
NPHP3-208ENST00000490993 CEP250Q9BV73 2442 aa5.85□□□□□ -1.47
NPHP3-208ENST00000490993 PRSS47A8MTI9 375 aa5.85□□□□□ -1.47
NPHP3-208ENST00000490993 SERF1AO75920 110 aa5.85□□□□□ -1.47
NPHP3-208ENST00000490993 MSMBP08118 114 aa5.85□□□□□ -1.47
NPHP3-208ENST00000490993 ZNF841Q6ZN19 808 aa5.85□□□□□ -1.47
NPHP3-208ENST00000490993 Q86TA4 180 aa5.85□□□□□ -1.47
NPHP3-208ENST00000490993 LINC01356Q8N9X3 169 aa5.85□□□□□ -1.47
NPHP3-208ENST00000490993 MAP1LC3AQ9H492 121 aa5.85□□□□□ -1.47
NPHP3-208ENST00000490993 ZMAT5Q9UDW3 170 aaKnown RBP5.85□□□□□ -1.47
NPHP3-208ENST00000490993 BTF3P20290 206 aaKnown RBP5.85□□□□□ -1.47
NPHP3-208ENST00000490993 EXOC3-AS1Q8N2X6 119 aa5.85□□□□□ -1.47
NPHP3-208ENST00000490993 OR10AG1Q8NH19 301 aa5.85□□□□□ -1.47
NPHP3-208ENST00000490993 PRSS22Q9GZN4 317 aa5.85□□□□□ -1.47
NPHP3-208ENST00000490993 NPFFR1Q9GZQ6 430 aa5.85□□□□□ -1.47
NPHP3-208ENST00000490993 TRBV19A0A075B6N1 114 aa5.85□□□□□ -1.47
NPHP3-208ENST00000490993 AMBPP02760 352 aa5.85□□□□□ -1.47
NPHP3-208ENST00000490993 PAX1P15863 534 aa5.85□□□□□ -1.47
NPHP3-208ENST00000490993 TSPOP30536 169 aa5.85□□□□□ -1.47
NPHP3-208ENST00000490993 FER1L6-AS1Q8NA97 138 aa5.85□□□□□ -1.47
NPHP3-208ENST00000490993 V9GYV3 84 aa5.85□□□□□ -1.47
NPHP3-208ENST00000490993 YLPM1P49750 1951 aaKnown RBP5.85□□□□□ -1.47
NPHP3-208ENST00000490993 SNRPD3P62318 126 aaKnown RBP5.84□□□□□ -1.47
NPHP3-208ENST00000490993 KLF2Q9Y5W3 355 aaPredicted RBP5.84□□□□□ -1.47
NPHP3-208ENST00000490993 PCSK5Q92824 1860 aa5.84□□□□□ -1.47
NPHP3-208ENST00000490993 OVOL1O14753 267 aa5.84□□□□□ -1.47
NPHP3-208ENST00000490993 DLX1P56177 255 aa5.84□□□□□ -1.47
NPHP3-208ENST00000490993 C1orf194Q5T5A4 169 aa5.84□□□□□ -1.47
NPHP3-208ENST00000490993 SIGLEC15Q6ZMC9 328 aa5.84□□□□□ -1.47
NPHP3-208ENST00000490993 C1orf229Q6ZS94 237 aaPredicted RBP5.84□□□□□ -1.47
NPHP3-208ENST00000490993 CHCHD1Q96BP2 118 aaKnown RBP5.84□□□□□ -1.47
NPHP3-208ENST00000490993 I3L2K1 104 aa5.84□□□□□ -1.47
NPHP3-208ENST00000490993 J3QLI3 93 aa5.84□□□□□ -1.47
NPHP3-208ENST00000490993 NDUFA3O95167 84 aa5.84□□□□□ -1.47
NPHP3-208ENST00000490993 GPX1P07203 203 aa5.84□□□□□ -1.47
NPHP3-208ENST00000490993 Q0VG73 95 aa5.84□□□□□ -1.47
NPHP3-208ENST00000490993 Q6ZN92 141 aa5.84□□□□□ -1.47
NPHP3-208ENST00000490993 NUP35Q8NFH5 326 aa5.84□□□□□ -1.47
NPHP3-208ENST00000490993 IGFBPL1Q8WX77 278 aa5.84□□□□□ -1.47
NPHP3-208ENST00000490993 PAM16Q9Y3D7 125 aa5.84□□□□□ -1.47
NPHP3-208ENST00000490993 SMIM27A0A1W2PRY6 76 aa5.84□□□□□ -1.48
NPHP3-208ENST00000490993 ATP6V0E1O15342 81 aa5.84□□□□□ -1.48
NPHP3-208ENST00000490993 CRYGCP07315 174 aa5.84□□□□□ -1.48
NPHP3-208ENST00000490993 GFI1BQ5VTD9 330 aa5.84□□□□□ -1.48
NPHP3-208ENST00000490993 DYNLRB2Q8TF09 96 aa5.84□□□□□ -1.48
NPHP3-208ENST00000490993 RITA1Q96K30 269 aa5.84□□□□□ -1.48
NPHP3-208ENST00000490993 MRPL27Q9P0M9 148 aaKnown RBP5.84□□□□□ -1.48
NPHP3-208ENST00000490993 ZFHX2Q9C0A1 2572 aaPredicted RBP5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms