RNA–Protein interactions for RNA: ENST00000490833.5

FN1-223, Transcript of fibronectin 1, human

TSL 3

Gene FN1, Length 699 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FN1-223	ENST00000490833	NDFIP1	Q9BT67	221 aa		5.05	□□□□□ -1.6
FN1-223	ENST00000490833	MLST8	Q9BVC4	326 aa		5.05	□□□□□ -1.6
FN1-223	ENST00000490833	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	5.05	□□□□□ -1.6
FN1-223	ENST00000490833	RPP21	Q9H633	154 aa	Known RBP	5.05	□□□□□ -1.6
FN1-223	ENST00000490833	HIF1AN	Q9NWT6	349 aa		5.05	□□□□□ -1.6
FN1-223	ENST00000490833	DCAF16	Q9NXF7	216 aa		5.05	□□□□□ -1.6
FN1-223	ENST00000490833	C21orf62	Q9NYP8	219 aa		5.05	□□□□□ -1.6
FN1-223	ENST00000490833	RIF1	Q5UIP0	2472 aa	Known RBP	5.05	□□□□□ -1.6
FN1-223	ENST00000490833	PLCE1	Q9P212	2302 aa		5.05	□□□□□ -1.6
FN1-223	ENST00000490833	MYO15A	Q9UKN7	3530 aa		5.04	□□□□□ -1.6
FN1-223	ENST00000490833	TRBV19	A0A075B6N1	114 aa		5.04	□□□□□ -1.6
FN1-223	ENST00000490833	TRBV7-1	A0A0A6YYK4	115 aa		5.04	□□□□□ -1.6
FN1-223	ENST00000490833	WI2-2373I1.2	A0A1W2PRP0	233 aa		5.04	□□□□□ -1.6
FN1-223	ENST00000490833	IFITM10	A6NMD0	228 aa		5.04	□□□□□ -1.6
FN1-223	ENST00000490833		A6NNC1	897 aa		5.04	□□□□□ -1.6
FN1-223	ENST00000490833		A8MWP6	167 aa		5.04	□□□□□ -1.6
FN1-223	ENST00000490833	BRI3	O95415	125 aa		5.04	□□□□□ -1.6
FN1-223	ENST00000490833	HLA-DRB1	P01911	266 aa		5.04	□□□□□ -1.6
FN1-223	ENST00000490833	FOSL1	P15407	271 aa		5.04	□□□□□ -1.6
FN1-223	ENST00000490833	GATA3	P23771	443 aa		5.04	□□□□□ -1.6
FN1-223	ENST00000490833	COX7A1	P24310	79 aa		5.04	□□□□□ -1.6
FN1-223	ENST00000490833	SST	P61278	116 aa		5.04	□□□□□ -1.6
FN1-223	ENST00000490833	ADORA2A-AS1	P86434	159 aa		5.04	□□□□□ -1.6
FN1-223	ENST00000490833	SRSF2	Q01130	221 aa	Known RBP	5.04	□□□□□ -1.6
FN1-223	ENST00000490833	REL	Q04864	619 aa	Predicted RBP	5.04	□□□□□ -1.6
FN1-223	ENST00000490833	OR5I1	Q13606	314 aa		5.04	□□□□□ -1.6
FN1-223	ENST00000490833	PATE2	Q6UY27	113 aa		5.04	□□□□□ -1.6
FN1-223	ENST00000490833	ZNF600	Q6ZNG1	722 aa		5.04	□□□□□ -1.6
FN1-223	ENST00000490833	REC114	Q7Z4M0	266 aa		5.04	□□□□□ -1.6
FN1-223	ENST00000490833	NUDT10	Q8NFP7	164 aa		5.04	□□□□□ -1.6
FN1-223	ENST00000490833	CHCHD1	Q96BP2	118 aa	Known RBP	5.04	□□□□□ -1.6
FN1-223	ENST00000490833	MBD6	Q96DN6	1003 aa		5.04	□□□□□ -1.6
FN1-223	ENST00000490833	RNF125	Q96EQ8	232 aa		5.04	□□□□□ -1.6
FN1-223	ENST00000490833	NUDT11	Q96G61	164 aa		5.04	□□□□□ -1.6
FN1-223	ENST00000490833	PRSS22	Q9GZN4	317 aa		5.04	□□□□□ -1.6
FN1-223	ENST00000490833		Q9H3A6	140 aa		5.04	□□□□□ -1.6
FN1-223	ENST00000490833	FBXL15	Q9H469	300 aa		5.04	□□□□□ -1.6
FN1-223	ENST00000490833	NAGK	Q9UJ70	344 aa		5.04	□□□□□ -1.6
FN1-223	ENST00000490833	SPTBN4	Q9H254	2564 aa		5.04	□□□□□ -1.6
FN1-223	ENST00000490833	ZGRF1	Q86YA3	2104 aa		5.03	□□□□□ -1.6
FN1-223	ENST00000490833	IGLV11-55	A0A075B6I3	123 aa		5.03	□□□□□ -1.6
FN1-223	ENST00000490833	IGHV2-70D	A0A0C4DH43	119 aa		5.03	□□□□□ -1.6
FN1-223	ENST00000490833	RBAKDN	A6NC62	111 aa		5.03	□□□□□ -1.6
FN1-223	ENST00000490833	NCBP2L	A6PVI3	153 aa	Known RBP	5.03	□□□□□ -1.6
FN1-223	ENST00000490833		E7EUB6	86 aa		5.03	□□□□□ -1.6
FN1-223	ENST00000490833	NPIPB6	E9PJ23	425 aa		5.03	□□□□□ -1.6
FN1-223	ENST00000490833		H3BUA1	57 aa		5.03	□□□□□ -1.6
FN1-223	ENST00000490833	TOX4	O94842	621 aa		5.03	□□□□□ -1.6
FN1-223	ENST00000490833	IGLV2-8	P01709	118 aa		5.03	□□□□□ -1.6
FN1-223	ENST00000490833	GPX1	P07203	203 aa		5.03	□□□□□ -1.6
FN1-223	ENST00000490833	GP9	P14770	177 aa		5.03	□□□□□ -1.6
FN1-223	ENST00000490833	PAX1	P15863	534 aa		5.03	□□□□□ -1.6
FN1-223	ENST00000490833	TMEM11	P17152	192 aa		5.03	□□□□□ -1.6
FN1-223	ENST00000490833	GATA2	P23769	480 aa	Predicted RBP	5.03	□□□□□ -1.6
FN1-223	ENST00000490833	ADM	P35318	185 aa		5.03	□□□□□ -1.6
FN1-223	ENST00000490833	MFAP2	P55001	183 aa		5.03	□□□□□ -1.6
FN1-223	ENST00000490833	LYZ	P61626	148 aa		5.03	□□□□□ -1.6
FN1-223	ENST00000490833	MLANA	Q16655	118 aa		5.03	□□□□□ -1.6
FN1-223	ENST00000490833	MRGPRG-AS1	Q2M3A8	158 aa		5.03	□□□□□ -1.6
FN1-223	ENST00000490833	PDZD11	Q5EBL8	140 aa		5.03	□□□□□ -1.6
FN1-223	ENST00000490833	TMEM136	Q6ZRR5	245 aa		5.03	□□□□□ -1.6
FN1-223	ENST00000490833	COX8C	Q7Z4L0	72 aa		5.03	□□□□□ -1.6
FN1-223	ENST00000490833	VMO1	Q7Z5L0	202 aa		5.03	□□□□□ -1.6
FN1-223	ENST00000490833	NHLRC2	Q8NBF2	726 aa		5.03	□□□□□ -1.6
FN1-223	ENST00000490833	CFHR4	Q92496	578 aa		5.03	□□□□□ -1.6
FN1-223	ENST00000490833	KCNS1	Q96KK3	526 aa		5.03	□□□□□ -1.6
FN1-223	ENST00000490833	NDUFAF3	Q9BU61	184 aa		5.03	□□□□□ -1.6
FN1-223	ENST00000490833	PRDM13	Q9H4Q3	707 aa		5.03	□□□□□ -1.6
FN1-223	ENST00000490833	PRORY	Q9H606	182 aa		5.03	□□□□□ -1.6
FN1-223	ENST00000490833	ZMAT5	Q9UDW3	170 aa	Known RBP	5.03	□□□□□ -1.6
FN1-223	ENST00000490833	RABAC1	Q9UI14	185 aa		5.03	□□□□□ -1.6
FN1-223	ENST00000490833	YLPM1	P49750	1951 aa	Known RBP	5.03	□□□□□ -1.6
FN1-223	ENST00000490833	PTPRZ1	P23471	2315 aa	Predicted RBP	5.03	□□□□□ -1.6
FN1-223	ENST00000490833	ACACA	Q13085	2346 aa		5.03	□□□□□ -1.6
FN1-223	ENST00000490833	FRYL	O94915	3013 aa		5.03	□□□□□ -1.6
FN1-223	ENST00000490833	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	5.03	□□□□□ -1.6
FN1-223	ENST00000490833	DIDO1	Q9BTC0	2240 aa	Known RBP	5.03	□□□□□ -1.6
FN1-223	ENST00000490833	RP1L1	Q8IWN7	2480 aa	Predicted RBP	5.02	□□□□□ -1.61
FN1-223	ENST00000490833	POLE	Q07864	2286 aa		5.02	□□□□□ -1.61
FN1-223	ENST00000490833	ZNF292	O60281	2723 aa		5.02	□□□□□ -1.61
FN1-223	ENST00000490833	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	5.02	□□□□□ -1.61
FN1-223	ENST00000490833	IGHV3-72	A0A0B4J1Y9	119 aa		5.02	□□□□□ -1.61
FN1-223	ENST00000490833	TRAV20	A0A0B4J274	112 aa		5.02	□□□□□ -1.61
FN1-223	ENST00000490833	C19orf71	A6NCJ1	209 aa		5.02	□□□□□ -1.61
FN1-223	ENST00000490833	HIGD1C	A8MV81	97 aa		5.02	□□□□□ -1.61
FN1-223	ENST00000490833	ZNF705F	A8MVS1	300 aa	Predicted RBP	5.02	□□□□□ -1.61
FN1-223	ENST00000490833		H3BRN7	92 aa		5.02	□□□□□ -1.61
FN1-223	ENST00000490833		K7EIM0	57 aa		5.02	□□□□□ -1.61
FN1-223	ENST00000490833	SLC17A3	O00476	420 aa		5.02	□□□□□ -1.61
FN1-223	ENST00000490833	CHEK1	O14757	476 aa		5.02	□□□□□ -1.61
FN1-223	ENST00000490833	HSBP1	O75506	76 aa		5.02	□□□□□ -1.61
FN1-223	ENST00000490833	FCN3	O75636	299 aa		5.02	□□□□□ -1.61
FN1-223	ENST00000490833	PLAU	P00749	431 aa		5.02	□□□□□ -1.61
FN1-223	ENST00000490833	RPLP1	P05386	114 aa	Known RBP	5.02	□□□□□ -1.61
FN1-223	ENST00000490833	ZNF705D	P0CH99	300 aa	Predicted RBP	5.02	□□□□□ -1.61
FN1-223	ENST00000490833	ZNF705B	P0CI00	300 aa	Predicted RBP	5.02	□□□□□ -1.61
FN1-223	ENST00000490833	MYOD1	P15172	320 aa		5.02	□□□□□ -1.61
FN1-223	ENST00000490833	CBLN1	P23435	193 aa		5.02	□□□□□ -1.61
FN1-223	ENST00000490833	DIAPH2-AS1	Q14236	149 aa		5.02	□□□□□ -1.61
FN1-223	ENST00000490833	PSG3	Q16557	428 aa		5.02	□□□□□ -1.61

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