RNA–Protein interactions for RNA: ENST00000490192.1

TM9SF3-206, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 4

Gene TM9SF3, Length 884 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-206ENST00000490192 ADAMTS7Q9UKP4 1686 aa3.17□□□□□ -1.9
TM9SF3-206ENST00000490192 ARHGEF28Q8N1W1 1705 aaKnown RBP3.17□□□□□ -1.9
TM9SF3-206ENST00000490192 MPDZO75970 2070 aa3.17□□□□□ -1.9
TM9SF3-206ENST00000490192 IGLV3-9A0A075B6K5 115 aa3.17□□□□□ -1.9
TM9SF3-206ENST00000490192 HLA-EP13747 358 aa3.17□□□□□ -1.9
TM9SF3-206ENST00000490192 MYL5Q02045 173 aa3.17□□□□□ -1.9
TM9SF3-206ENST00000490192 CXCL16Q9H2A7 254 aa3.17□□□□□ -1.9
TM9SF3-206ENST00000490192 NAT8BQ9UHF3 227 aa3.17□□□□□ -1.9
TM9SF3-206ENST00000490192 CEP164Q9UPV0 1460 aa3.16□□□□□ -1.9
TM9SF3-206ENST00000490192 EML6Q6ZMW3 1958 aa3.16□□□□□ -1.9
TM9SF3-206ENST00000490192 TRAV3A0A0B4J244 114 aa3.16□□□□□ -1.9
TM9SF3-206ENST00000490192 LY6LH3BQJ8 138 aa3.16□□□□□ -1.9
TM9SF3-206ENST00000490192 CST7O76096 145 aa3.16□□□□□ -1.9
TM9SF3-206ENST00000490192 EIF3IQ13347 325 aaKnown RBP3.16□□□□□ -1.9
TM9SF3-206ENST00000490192 SMCO1Q147U7 214 aa3.16□□□□□ -1.9
TM9SF3-206ENST00000490192 ZNF826PQ6ZT77 177 aa3.16□□□□□ -1.9
TM9SF3-206ENST00000490192 C9orf163Q8N9P6 203 aa3.16□□□□□ -1.9
TM9SF3-206ENST00000490192 TAS2R4Q9NYW5 299 aa3.16□□□□□ -1.9
TM9SF3-206ENST00000490192 GSKIPQ9P0R6 139 aa3.16□□□□□ -1.9
TM9SF3-206ENST00000490192 JPT1Q9UK76 154 aa3.16□□□□□ -1.9
TM9SF3-206ENST00000490192 RTEL1-TNFRSF6BF6WH68 1400 aa3.16□□□□□ -1.9
TM9SF3-206ENST00000490192 SCN8AQ9UQD0 1980 aa3.16□□□□□ -1.9
TM9SF3-206ENST00000490192 SCRIBQ14160 1630 aa3.15□□□□□ -1.9
TM9SF3-206ENST00000490192 ADGRB3O60242 1522 aa3.15□□□□□ -1.9
TM9SF3-206ENST00000490192 H3BRN7 92 aa3.15□□□□□ -1.91
TM9SF3-206ENST00000490192 J3KT08 172 aa3.15□□□□□ -1.91
TM9SF3-206ENST00000490192 K7ERJ3 54 aa3.15□□□□□ -1.91
TM9SF3-206ENST00000490192 TIMM17BO60830 172 aa3.15□□□□□ -1.91
TM9SF3-206ENST00000490192 DHFRP00374 187 aa3.15□□□□□ -1.91
TM9SF3-206ENST00000490192 ZNF714Q96N38 554 aa3.15□□□□□ -1.91
TM9SF3-206ENST00000490192 HS3ST2Q9Y278 367 aa3.15□□□□□ -1.91
TM9SF3-206ENST00000490192 LHFPL6Q9Y693 200 aa3.15□□□□□ -1.91
TM9SF3-206ENST00000490192 BCL9O00512 1426 aa3.15□□□□□ -1.91
TM9SF3-206ENST00000490192 NUMA1Q14980 2115 aa3.14□□□□□ -1.91
TM9SF3-206ENST00000490192 ADGBQ8N7X0 1667 aa3.14□□□□□ -1.91
TM9SF3-206ENST00000490192 A0A087WX48 190 aa3.14□□□□□ -1.91
TM9SF3-206ENST00000490192 TRAV1-1A0A0B4J248 108 aa3.14□□□□□ -1.91
TM9SF3-206ENST00000490192 TRAV5A0A0B4J249 113 aa3.14□□□□□ -1.91
TM9SF3-206ENST00000490192 OVOL1O14753 267 aa3.14□□□□□ -1.91
TM9SF3-206ENST00000490192 DEGS1O15121 323 aa3.14□□□□□ -1.91
TM9SF3-206ENST00000490192 GADD45GO95257 159 aa3.14□□□□□ -1.91
TM9SF3-206ENST00000490192 UBBP0CG47 229 aa3.14□□□□□ -1.91
TM9SF3-206ENST00000490192 MGST1P10620 155 aaKnown RBP3.14□□□□□ -1.91
TM9SF3-206ENST00000490192 RPS28P62857 69 aaKnown RBP3.14□□□□□ -1.91
TM9SF3-206ENST00000490192 HBBP68871 147 aa3.14□□□□□ -1.91
TM9SF3-206ENST00000490192 OR8B8Q15620 311 aa3.14□□□□□ -1.91
TM9SF3-206ENST00000490192 ESRGQ1W209 222 aa3.14□□□□□ -1.91
TM9SF3-206ENST00000490192 C7orf65Q6ZTY9 151 aa3.14□□□□□ -1.91
TM9SF3-206ENST00000490192 LINC00471Q8N535 108 aa3.14□□□□□ -1.91
TM9SF3-206ENST00000490192 ZNF418Q8TF45 676 aaPredicted RBP3.14□□□□□ -1.91
TM9SF3-206ENST00000490192 LZICQ8WZA0 190 aa3.14□□□□□ -1.91
TM9SF3-206ENST00000490192 LCE3DQ9BYE3 92 aa3.14□□□□□ -1.91
TM9SF3-206ENST00000490192 TTTY12Q9BZ98 90 aa3.14□□□□□ -1.91
TM9SF3-206ENST00000490192 OR2H1Q9GZK4 316 aa3.14□□□□□ -1.91
TM9SF3-206ENST00000490192 NCKAP5O14513 1909 aa3.14□□□□□ -1.91
TM9SF3-206ENST00000490192 CECR2Q9BXF3 1484 aa3.14□□□□□ -1.91
TM9SF3-206ENST00000490192 COL4A2P08572 1712 aa3.13□□□□□ -1.91
TM9SF3-206ENST00000490192 ZNF737O75373 536 aa3.13□□□□□ -1.91
TM9SF3-206ENST00000490192 LYZL6O75951 148 aa3.13□□□□□ -1.91
TM9SF3-206ENST00000490192 C1QCP02747 245 aa3.13□□□□□ -1.91
TM9SF3-206ENST00000490192 SPANXN5Q5MJ07 72 aa3.13□□□□□ -1.91
TM9SF3-206ENST00000490192 SPACA4Q8TDM5 124 aa3.13□□□□□ -1.91
TM9SF3-206ENST00000490192 SLC50A1Q9BRV3 221 aa3.13□□□□□ -1.91
TM9SF3-206ENST00000490192 ARAP1Q96P48 1450 aa3.13□□□□□ -1.91
TM9SF3-206ENST00000490192 CCDC88CQ9P219 2028 aa3.12□□□□□ -1.91
TM9SF3-206ENST00000490192 COL4A4P53420 1690 aaPredicted RBP3.12□□□□□ -1.91
TM9SF3-206ENST00000490192 PXDNLA1KZ92 1463 aa3.12□□□□□ -1.91
TM9SF3-206ENST00000490192 A8MWV9 139 aa3.12□□□□□ -1.91
TM9SF3-206ENST00000490192 HIST1H2BKO60814 126 aa3.12□□□□□ -1.91
TM9SF3-206ENST00000490192 HIST1H2BJP06899 126 aa3.12□□□□□ -1.91
TM9SF3-206ENST00000490192 FABP2P12104 132 aa3.12□□□□□ -1.91
TM9SF3-206ENST00000490192 GTF2A1P52655 376 aaPredicted RBP3.12□□□□□ -1.91
TM9SF3-206ENST00000490192 PHF5AQ7RTV0 110 aaKnown RBP3.12□□□□□ -1.91
TM9SF3-206ENST00000490192 TMEM229BQ8NBD8 167 aa3.12□□□□□ -1.91
TM9SF3-206ENST00000490192 TXNDC17Q9BRA2 123 aa3.12□□□□□ -1.91
TM9SF3-206ENST00000490192 CST9LQ9H4G1 147 aa3.12□□□□□ -1.91
TM9SF3-206ENST00000490192 MROH2BQ7Z745 1585 aa3.12□□□□□ -1.91
TM9SF3-206ENST00000490192 SMARCA4P51532 1647 aa3.11□□□□□ -1.91
TM9SF3-206ENST00000490192 NCAPD3P42695 1498 aa3.11□□□□□ -1.91
TM9SF3-206ENST00000490192 TRAV36DV7A0A075B6V5 113 aa3.11□□□□□ -1.91
TM9SF3-206ENST00000490192 P0DMU3 169 aa3.11□□□□□ -1.91
TM9SF3-206ENST00000490192 FAM231AP0DMU4 169 aa3.11□□□□□ -1.91
TM9SF3-206ENST00000490192 FAM231CP0DMU5 169 aa3.11□□□□□ -1.91
TM9SF3-206ENST00000490192 SDC2P34741 201 aa3.11□□□□□ -1.91
TM9SF3-206ENST00000490192 RPL35P42766 123 aaKnown RBP3.11□□□□□ -1.91
TM9SF3-206ENST00000490192 RNASE10Q5GAN6 216 aaKnown RBP3.11□□□□□ -1.91
TM9SF3-206ENST00000490192 PATE2Q6UY27 113 aa3.11□□□□□ -1.91
TM9SF3-206ENST00000490192 Q8IYB0 196 aa3.11□□□□□ -1.91
TM9SF3-206ENST00000490192 OR4K15Q8NH41 348 aa3.11□□□□□ -1.91
TM9SF3-206ENST00000490192 CACYBPQ9HB71 228 aaKnown RBP3.11□□□□□ -1.91
TM9SF3-206ENST00000490192 RASL12Q9NYN1 266 aa3.11□□□□□ -1.91
TM9SF3-206ENST00000490192 RB1CC1Q8TDY2 1594 aa3.1□□□□□ -1.91
TM9SF3-206ENST00000490192 A0A1B0GX51 115 aa3.1□□□□□ -1.91
TM9SF3-206ENST00000490192 RER1O15258 196 aa3.1□□□□□ -1.91
TM9SF3-206ENST00000490192 ZNF705BP0CI00 300 aaPredicted RBP3.1□□□□□ -1.91
TM9SF3-206ENST00000490192 ZNF846Q147U1 533 aa3.1□□□□□ -1.91
TM9SF3-206ENST00000490192 CCDC153Q494R4 210 aa3.1□□□□□ -1.91
TM9SF3-206ENST00000490192 KRTAP5-5Q701N2 237 aaPredicted RBP3.1□□□□□ -1.91
TM9SF3-206ENST00000490192 BORCS5Q969J3 196 aa3.1□□□□□ -1.91
TM9SF3-206ENST00000490192 LINC00467Q9BRT7 94 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms