RNA–Protein interactions for RNA: ENST00000489611.5

COL9A1-208, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,940 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-208ENST00000489611 ATP5L2Q7Z4Y8 100 aa11.84□□□□□ -0.51
COL9A1-208ENST00000489611 TTC9CQ8N5M4 171 aa11.84□□□□□ -0.51
COL9A1-208ENST00000489611 Q8N6K4 173 aa11.84□□□□□ -0.51
COL9A1-208ENST00000489611 BLNKQ8WV28 456 aa11.84□□□□□ -0.51
COL9A1-208ENST00000489611 SHANK2-AS3Q9BTD1 123 aa11.84□□□□□ -0.51
COL9A1-208ENST00000489611 Q9H3A6 140 aa11.84□□□□□ -0.51
COL9A1-208ENST00000489611 ZNF462Q96JM2 2506 aa11.84□□□□□ -0.51
COL9A1-208ENST00000489611 TCRAP04437 139 aa11.84□□□□□ -0.51
COL9A1-208ENST00000489611 RUSC1-AS1Q66K80 236 aa11.84□□□□□ -0.51
COL9A1-208ENST00000489611 TMEM136Q6ZRR5 245 aa11.84□□□□□ -0.51
COL9A1-208ENST00000489611 TSKUQ8WUA8 353 aa11.84□□□□□ -0.51
COL9A1-208ENST00000489611 ARPC1AQ92747 370 aa11.84□□□□□ -0.51
COL9A1-208ENST00000489611 MLST8Q9BVC4 326 aa11.84□□□□□ -0.51
COL9A1-208ENST00000489611 ZNF492Q9P255 531 aa11.84□□□□□ -0.51
COL9A1-208ENST00000489611 SOX21Q9Y651 276 aaPredicted RBP11.84□□□□□ -0.51
COL9A1-208ENST00000489611 LTAP01374 205 aa11.83□□□□□ -0.52
COL9A1-208ENST00000489611 FAM106CPP0CH98 169 aa11.83□□□□□ -0.52
COL9A1-208ENST00000489611 MFAP4P55083 255 aa11.83□□□□□ -0.52
COL9A1-208ENST00000489611 LHFPL4Q7Z7J7 247 aa11.83□□□□□ -0.52
COL9A1-208ENST00000489611 NUDT10Q8NFP7 164 aa11.83□□□□□ -0.52
COL9A1-208ENST00000489611 OR4F17Q8NGA8 305 aa11.83□□□□□ -0.52
COL9A1-208ENST00000489611 NUDT11Q96G61 164 aa11.83□□□□□ -0.52
COL9A1-208ENST00000489611 LINC00479Q96M42 142 aa11.83□□□□□ -0.52
COL9A1-208ENST00000489611 NOL4LQ96MY1 436 aaPredicted RBP11.83□□□□□ -0.52
COL9A1-208ENST00000489611 SIRPDQ9H106 197 aa11.83□□□□□ -0.52
COL9A1-208ENST00000489611 FAM231BA6NCW3 169 aa11.82□□□□□ -0.52
COL9A1-208ENST00000489611 HOXB4P17483 251 aaPredicted RBP11.82□□□□□ -0.52
COL9A1-208ENST00000489611 UBE2E1P51965 193 aa11.82□□□□□ -0.52
COL9A1-208ENST00000489611 KLRD1Q13241 179 aa11.82□□□□□ -0.52
COL9A1-208ENST00000489611 C19orf35Q6ZS72 473 aa11.82□□□□□ -0.52
COL9A1-208ENST00000489611 C7orf69Q9H7B7 122 aa11.82□□□□□ -0.52
COL9A1-208ENST00000489611 UBTD1Q9HAC8 227 aa11.82□□□□□ -0.52
COL9A1-208ENST00000489611 IGLV11-55A0A075B6I3 123 aa11.82□□□□□ -0.52
COL9A1-208ENST00000489611 IGHV3-21A0A0B4J1V1 117 aa11.82□□□□□ -0.52
COL9A1-208ENST00000489611 IGHV2-70DA0A0C4DH43 119 aa11.82□□□□□ -0.52
COL9A1-208ENST00000489611 H3BRN7 92 aa11.82□□□□□ -0.52
COL9A1-208ENST00000489611 K7EQM0 130 aa11.82□□□□□ -0.52
COL9A1-208ENST00000489611 DEFA6Q01524 100 aa11.82□□□□□ -0.52
COL9A1-208ENST00000489611 BAGE3Q86Y29 109 aa11.82□□□□□ -0.52
COL9A1-208ENST00000489611 RNF125Q96EQ8 232 aa11.82□□□□□ -0.52
COL9A1-208ENST00000489611 TXN2Q99757 166 aa11.82□□□□□ -0.52
COL9A1-208ENST00000489611 GFRA4Q9GZZ7 299 aa11.82□□□□□ -0.52
COL9A1-208ENST00000489611 LPAR2Q9HBW0 351 aa11.82□□□□□ -0.52
COL9A1-208ENST00000489611 WI2-2373I1.2A0A1W2PRP0 233 aa11.81□□□□□ -0.52
COL9A1-208ENST00000489611 A8MWL6 223 aa11.81□□□□□ -0.52
COL9A1-208ENST00000489611 GNG7O60262 68 aa11.81□□□□□ -0.52
COL9A1-208ENST00000489611 BRS3P32247 399 aa11.81□□□□□ -0.52
COL9A1-208ENST00000489611 PDE6HQ13956 83 aa11.81□□□□□ -0.52
COL9A1-208ENST00000489611 TMEM256Q8N2U0 113 aa11.81□□□□□ -0.52
COL9A1-208ENST00000489611 ARL6IP6Q8N6S5 226 aa11.81□□□□□ -0.52
COL9A1-208ENST00000489611 MS4A10Q96PG2 267 aa11.81□□□□□ -0.52
COL9A1-208ENST00000489611 TRAV34A0A0B4J273 112 aa11.8□□□□□ -0.52
COL9A1-208ENST00000489611 TOX4O94842 621 aa11.8□□□□□ -0.52
COL9A1-208ENST00000489611 PAX1P15863 534 aa11.8□□□□□ -0.52
COL9A1-208ENST00000489611 FCGR2BP31994 310 aaPredicted RBP11.8□□□□□ -0.52
COL9A1-208ENST00000489611 GNG5P63218 68 aa11.8□□□□□ -0.52
COL9A1-208ENST00000489611 CDPF1Q6NVV7 123 aa11.8□□□□□ -0.52
COL9A1-208ENST00000489611 ZNF491Q8N8L2 437 aa11.8□□□□□ -0.52
COL9A1-208ENST00000489611 PRSS22Q9GZN4 317 aa11.8□□□□□ -0.52
COL9A1-208ENST00000489611 TRBV19A0A075B6N1 114 aa11.8□□□□□ -0.52
COL9A1-208ENST00000489611 TRAV20A0A0B4J274 112 aa11.8□□□□□ -0.52
COL9A1-208ENST00000489611 NCBP2LA6PVI3 153 aaKnown RBP11.8□□□□□ -0.52
COL9A1-208ENST00000489611 APCSP02743 223 aa11.8□□□□□ -0.52
COL9A1-208ENST00000489611 TMEM11P17152 192 aa11.8□□□□□ -0.52
COL9A1-208ENST00000489611 CDKN1AP38936 164 aa11.8□□□□□ -0.52
COL9A1-208ENST00000489611 RAB4BP61018 213 aa11.8□□□□□ -0.52
COL9A1-208ENST00000489611 NHLRC2Q8NBF2 726 aa11.8□□□□□ -0.52
COL9A1-208ENST00000489611 OR4B1Q8NGF8 309 aa11.8□□□□□ -0.52
COL9A1-208ENST00000489611 DAZAP1Q96EP5 407 aaKnown RBP11.8□□□□□ -0.52
COL9A1-208ENST00000489611 GSX1Q9H4S2 264 aaPredicted RBP11.8□□□□□ -0.52
COL9A1-208ENST00000489611 RPP21Q9H633 154 aaKnown RBP11.8□□□□□ -0.52
COL9A1-208ENST00000489611 COL12A1Q99715 3063 aa11.8□□□□□ -0.52
COL9A1-208ENST00000489611 KMT2BQ9UMN6 2715 aaPredicted RBP11.79□□□□□ -0.52
COL9A1-208ENST00000489611 SERTM2A0A1B0GWG4 89 aa11.79□□□□□ -0.52
COL9A1-208ENST00000489611 GRIFINA4D1Z8 144 aa11.79□□□□□ -0.52
COL9A1-208ENST00000489611 HLA-DRB1P01911 266 aa11.79□□□□□ -0.52
COL9A1-208ENST00000489611 ZFP36P26651 326 aaKnown RBP11.79□□□□□ -0.52
COL9A1-208ENST00000489611 TCL1AP56279 114 aa11.79□□□□□ -0.52
COL9A1-208ENST00000489611 FANCD2OSQ96PS1 177 aa11.79□□□□□ -0.52
COL9A1-208ENST00000489611 ZNF586Q9NXT0 402 aa11.79□□□□□ -0.52
COL9A1-208ENST00000489611 ZFP30Q9Y2G7 519 aa11.79□□□□□ -0.52
COL9A1-208ENST00000489611 C19orf71A6NCJ1 209 aa11.78□□□□□ -0.52
COL9A1-208ENST00000489611 P01737 135 aa11.78□□□□□ -0.52
COL9A1-208ENST00000489611 IL4P05112 153 aa11.78□□□□□ -0.52
COL9A1-208ENST00000489611 DDTP30046 118 aa11.78□□□□□ -0.52
COL9A1-208ENST00000489611 KLK9Q2XQG4 91 aa11.78□□□□□ -0.52
COL9A1-208ENST00000489611 TMEM75Q8N9X5 138 aa11.78□□□□□ -0.52
COL9A1-208ENST00000489611 NUP35Q8NFH5 326 aa11.78□□□□□ -0.52
COL9A1-208ENST00000489611 C21orf62Q9NYP8 219 aa11.78□□□□□ -0.52
COL9A1-208ENST00000489611 KLK9Q9UKQ9 250 aa11.78□□□□□ -0.52
COL9A1-208ENST00000489611 POLR3KQ9Y2Y1 108 aaPredicted RBP11.78□□□□□ -0.52
COL9A1-208ENST00000489611 HRNRQ86YZ3 2850 aaPredicted RBP11.78□□□□□ -0.52
COL9A1-208ENST00000489611 FBLL1A6NHQ2 334 aaKnown RBP11.78□□□□□ -0.52
COL9A1-208ENST00000489611 SERF1AO75920 110 aa11.78□□□□□ -0.52
COL9A1-208ENST00000489611 IGLC2P0DOY2 106 aa11.78□□□□□ -0.52
COL9A1-208ENST00000489611 LEMD1Q68G75 181 aa11.78□□□□□ -0.52
COL9A1-208ENST00000489611 PRR27Q6MZM9 219 aa11.78□□□□□ -0.52
COL9A1-208ENST00000489611 MRPL54Q6P161 138 aaKnown RBP11.78□□□□□ -0.52
COL9A1-208ENST00000489611 VN1R17PQ8TDU5 208 aa11.78□□□□□ -0.52
COL9A1-208ENST00000489611 TP53TG3Q9ULZ0 132 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms