RNA–Protein interactions for RNA: ENST00000489274.1

NINJ1-204, Transcript of ninjurin 1, humanhuman

TSL 2

Gene NINJ1, Length 2,026 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NINJ1-204ENST00000489274 Q56UQ5 140 aa11.42□□□□□ -0.58
NINJ1-204ENST00000489274 UNQ5815/PRO19632Q6UWF5 114 aa11.42□□□□□ -0.58
NINJ1-204ENST00000489274 LINC00518Q8N0U6 118 aa11.42□□□□□ -0.58
NINJ1-204ENST00000489274 NRGNQ92686 78 aa11.42□□□□□ -0.58
NINJ1-204ENST00000489274 TMUB1Q9BVT8 246 aa11.42□□□□□ -0.58
NINJ1-204ENST00000489274 C7orf69Q9H7B7 122 aa11.42□□□□□ -0.58
NINJ1-204ENST00000489274 IL36BQ9NZH7 164 aa11.42□□□□□ -0.58
NINJ1-204ENST00000489274 FBXL7Q9UJT9 491 aa11.42□□□□□ -0.58
NINJ1-204ENST00000489274 ABCA2Q9BZC7 2435 aa11.41□□□□□ -0.58
NINJ1-204ENST00000489274 IGHV3OR16-10A0A075B7F0 116 aa11.41□□□□□ -0.58
NINJ1-204ENST00000489274 ISLRO14498 428 aa11.41□□□□□ -0.58
NINJ1-204ENST00000489274 ATP6V0E1O15342 81 aa11.41□□□□□ -0.58
NINJ1-204ENST00000489274 IL4P05112 153 aa11.41□□□□□ -0.58
NINJ1-204ENST00000489274 HOXA5P20719 270 aa11.41□□□□□ -0.58
NINJ1-204ENST00000489274 GATA3P23771 443 aa11.41□□□□□ -0.58
NINJ1-204ENST00000489274 ERVFC1-1P60608 527 aa11.41□□□□□ -0.58
NINJ1-204ENST00000489274 CLEC12BQ2HXU8 276 aa11.41□□□□□ -0.58
NINJ1-204ENST00000489274 MOB4Q9Y3A3 225 aa11.41□□□□□ -0.58
NINJ1-204ENST00000489274 KLF12Q9Y4X4 402 aa11.41□□□□□ -0.58
NINJ1-204ENST00000489274 S4R3C0 116 aa11.41□□□□□ -0.58
NINJ1-204ENST00000489274 A0A0U1RQK1 487 aa11.4□□□□□ -0.58
NINJ1-204ENST00000489274 SLC25A5P05141 298 aaKnown RBP11.4□□□□□ -0.58
NINJ1-204ENST00000489274 S100A9P06702 114 aaKnown RBP11.4□□□□□ -0.58
NINJ1-204ENST00000489274 OR5I1Q13606 314 aa11.4□□□□□ -0.58
NINJ1-204ENST00000489274 TMEM183BQ1AE95 376 aa11.4□□□□□ -0.58
NINJ1-204ENST00000489274 BRD3OSQ6XYD6 125 aa11.4□□□□□ -0.58
NINJ1-204ENST00000489274 C5orf17Q8NAS9 161 aa11.4□□□□□ -0.58
NINJ1-204ENST00000489274 LINC00479Q96M42 142 aa11.4□□□□□ -0.58
NINJ1-204ENST00000489274 ZNF586Q9NXT0 402 aa11.4□□□□□ -0.58
NINJ1-204ENST00000489274 V9GYV3 84 aa11.4□□□□□ -0.58
NINJ1-204ENST00000489274 TRBV9A0A0B4J1U6 114 aa11.4□□□□□ -0.59
NINJ1-204ENST00000489274 TRAV20A0A0B4J274 112 aa11.4□□□□□ -0.59
NINJ1-204ENST00000489274 CTSGP08311 255 aa11.4□□□□□ -0.59
NINJ1-204ENST00000489274 IGHV4-38-2P0DP08 117 aa11.4□□□□□ -0.59
NINJ1-204ENST00000489274 NDUFA6P56556 154 aa11.4□□□□□ -0.59
NINJ1-204ENST00000489274 BPIFA4PQ86YQ2 179 aa11.4□□□□□ -0.59
NINJ1-204ENST00000489274 Q9H3A6 140 aa11.4□□□□□ -0.59
NINJ1-204ENST00000489274 OTORQ9NRC9 128 aa11.4□□□□□ -0.59
NINJ1-204ENST00000489274 ZNF320A2RRD8 509 aa11.39□□□□□ -0.59
NINJ1-204ENST00000489274 SNRPCP09234 159 aaKnown RBP11.39□□□□□ -0.59
NINJ1-204ENST00000489274 SMIM12Q96EX1 92 aa11.39□□□□□ -0.59
NINJ1-204ENST00000489274 ATG101Q9BSB4 218 aa11.39□□□□□ -0.59
NINJ1-204ENST00000489274 SPG11Q96JI7 2443 aa11.38□□□□□ -0.59
NINJ1-204ENST00000489274 LINC01548A6NM66 108 aa11.38□□□□□ -0.59
NINJ1-204ENST00000489274 SLC17A3O00476 420 aa11.38□□□□□ -0.59
NINJ1-204ENST00000489274 CRIP2P52943 208 aaPredicted RBP11.38□□□□□ -0.59
NINJ1-204ENST00000489274 USF2Q15853 346 aaPredicted RBP11.38□□□□□ -0.59
NINJ1-204ENST00000489274 ECSCRQ19T08 205 aa11.38□□□□□ -0.59
NINJ1-204ENST00000489274 ACTL10Q5JWF8 245 aa11.38□□□□□ -0.59
NINJ1-204ENST00000489274 BAGE2Q86Y30 109 aa11.38□□□□□ -0.59
NINJ1-204ENST00000489274 HIF1ANQ9NWT6 349 aa11.38□□□□□ -0.59
NINJ1-204ENST00000489274 ZNF98A6NK75 572 aa11.38□□□□□ -0.59
NINJ1-204ENST00000489274 MRPS12O15235 138 aaKnown RBP11.38□□□□□ -0.59
NINJ1-204ENST00000489274 AMY1AP04745 511 aa11.38□□□□□ -0.59
NINJ1-204ENST00000489274 S100A8P05109 93 aa11.38□□□□□ -0.59
NINJ1-204ENST00000489274 IGLC2P0DOY2 106 aa11.38□□□□□ -0.59
NINJ1-204ENST00000489274 GNG5P63218 68 aa11.38□□□□□ -0.59
NINJ1-204ENST00000489274 OR4F17Q8NGA8 305 aa11.38□□□□□ -0.59
NINJ1-204ENST00000489274 ZNF502Q8TBZ5 544 aa11.38□□□□□ -0.59
NINJ1-204ENST00000489274 TRBV19A0A075B6N1 114 aa11.37□□□□□ -0.59
NINJ1-204ENST00000489274 TRAV34A0A0B4J273 112 aa11.37□□□□□ -0.59
NINJ1-204ENST00000489274 TCRAP04437 139 aa11.37□□□□□ -0.59
NINJ1-204ENST00000489274 MGST1P10620 155 aaKnown RBP11.37□□□□□ -0.59
NINJ1-204ENST00000489274 CDX1P47902 265 aaPredicted RBP11.37□□□□□ -0.59
NINJ1-204ENST00000489274 RPL15P61313 204 aaKnown RBP11.37□□□□□ -0.59
NINJ1-204ENST00000489274 RHOGP84095 191 aa11.37□□□□□ -0.59
NINJ1-204ENST00000489274 RPEL1Q2QD12 228 aa11.37□□□□□ -0.59
NINJ1-204ENST00000489274 C15orf32Q32M92 178 aa11.37□□□□□ -0.59
NINJ1-204ENST00000489274 FAM231DQ6ZW35 169 aa11.37□□□□□ -0.59
NINJ1-204ENST00000489274 TMEM219Q86XT9 240 aa11.37□□□□□ -0.59
NINJ1-204ENST00000489274 LYPD1Q8N2G4 141 aa11.37□□□□□ -0.59
NINJ1-204ENST00000489274 RNASE7Q9H1E1 156 aaKnown RBP11.37□□□□□ -0.59
NINJ1-204ENST00000489274 GAR1Q9NY12 217 aaKnown RBP11.37□□□□□ -0.59
NINJ1-204ENST00000489274 COL12A1Q99715 3063 aa11.37□□□□□ -0.59
NINJ1-204ENST00000489274 A0A096LNT2 108 aa11.36□□□□□ -0.59
NINJ1-204ENST00000489274 A1L4Q6 167 aa11.36□□□□□ -0.59
NINJ1-204ENST00000489274 OR2T8A6NH00 312 aa11.36□□□□□ -0.59
NINJ1-204ENST00000489274 G3V318 75 aa11.36□□□□□ -0.59
NINJ1-204ENST00000489274 IGHV3-23P01764 117 aa11.36□□□□□ -0.59
NINJ1-204ENST00000489274 UBE2G1P62253 170 aa11.36□□□□□ -0.59
NINJ1-204ENST00000489274 C19orf54Q5BKX5 351 aa11.36□□□□□ -0.59
NINJ1-204ENST00000489274 IBA57Q5T440 356 aaKnown RBP11.36□□□□□ -0.59
NINJ1-204ENST00000489274 LINC01356Q8N9X3 169 aa11.36□□□□□ -0.59
NINJ1-204ENST00000489274 FMC1Q96HJ9 113 aa11.36□□□□□ -0.59
NINJ1-204ENST00000489274 A6NDX4 124 aa11.36□□□□□ -0.59
NINJ1-204ENST00000489274 SH2D7A6NKC9 451 aaPredicted RBP11.36□□□□□ -0.59
NINJ1-204ENST00000489274 H3BTX0 84 aa11.36□□□□□ -0.59
NINJ1-204ENST00000489274 ADMP35318 185 aa11.36□□□□□ -0.59
NINJ1-204ENST00000489274 GPR82Q96P67 336 aa11.36□□□□□ -0.59
NINJ1-204ENST00000489274 CHRDL1Q9BU40 450 aa11.36□□□□□ -0.59
NINJ1-204ENST00000489274 S100A7P31151 101 aa11.35□□□□□ -0.59
NINJ1-204ENST00000489274 PITPNC1Q9UKF7 332 aa11.35□□□□□ -0.59
NINJ1-204ENST00000489274 TRAV41A0A0B4J266 112 aa11.35□□□□□ -0.59
NINJ1-204ENST00000489274 TRBV6-1A0A0K0K1D8 114 aa11.35□□□□□ -0.59
NINJ1-204ENST00000489274 UBR5O95071 2799 aaPredicted RBP11.35□□□□□ -0.59
NINJ1-204ENST00000489274 AVPP01185 164 aa11.35□□□□□ -0.59
NINJ1-204ENST00000489274 BCL6BQ8N143 479 aaPredicted RBP11.35□□□□□ -0.59
NINJ1-204ENST00000489274 ZNF414Q96IQ9 312 aa11.35□□□□□ -0.59
NINJ1-204ENST00000489274 ATP6V0BQ99437 205 aa11.35□□□□□ -0.59
NINJ1-204ENST00000489274 MLST8Q9BVC4 326 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms