RNA–Protein interactions for RNA: ENST00000487932.5

PKD1-220, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 6,464 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-220ENST00000487932 VSIRQ9H7M9 311 aa12.6□□□□□ -0.39
PKD1-220ENST00000487932 ZNF138P52744 262 aa12.6□□□□□ -0.39
PKD1-220ENST00000487932 SAMD5Q5TGI4 173 aa12.6□□□□□ -0.39
PKD1-220ENST00000487932 LCN12Q6JVE5 192 aa12.59□□□□□ -0.39
PKD1-220ENST00000487932 E9PQ18 207 aa12.59□□□□□ -0.39
PKD1-220ENST00000487932 LAMTOR2Q9Y2Q5 125 aa12.59□□□□□ -0.39
PKD1-220ENST00000487932 SMKR1H3BMG3 65 aa12.59□□□□□ -0.39
PKD1-220ENST00000487932 GGTLC1Q9BX51 225 aa12.59□□□□□ -0.39
PKD1-220ENST00000487932 RGPD3A6NKT7 1758 aaPredicted RBP12.59□□□□□ -0.39
PKD1-220ENST00000487932 OVOL3O00110 214 aa12.58□□□□□ -0.39
PKD1-220ENST00000487932 PFN2P35080 140 aa12.58□□□□□ -0.39
PKD1-220ENST00000487932 C2orf82Q6UX34 121 aa12.58□□□□□ -0.39
PKD1-220ENST00000487932 PAQR4Q8N4S7 273 aaPredicted RBP12.58□□□□□ -0.39
PKD1-220ENST00000487932 MYOFQ9NZM1 2061 aa12.58□□□□□ -0.4
PKD1-220ENST00000487932 TRAV8-1A0A0A6YYK1 113 aa12.58□□□□□ -0.4
PKD1-220ENST00000487932 A0A1B0GTI1 187 aa12.58□□□□□ -0.4
PKD1-220ENST00000487932 PLEKHB2Q96CS7 222 aa12.58□□□□□ -0.4
PKD1-220ENST00000487932 SAA4P35542 130 aa12.58□□□□□ -0.4
PKD1-220ENST00000487932 TIMP3P35625 211 aa12.58□□□□□ -0.4
PKD1-220ENST00000487932 MINOS1Q5TGZ0 78 aa12.58□□□□□ -0.4
PKD1-220ENST00000487932 MINOS1-NBL1R4GNA1 71 aa12.58□□□□□ -0.4
PKD1-220ENST00000487932 PAX9P55771 341 aa12.58□□□□□ -0.4
PKD1-220ENST00000487932 SEC16AO15027 2179 aa12.58□□□□□ -0.4
PKD1-220ENST00000487932 KLK9Q9UKQ9 250 aa12.57□□□□□ -0.4
PKD1-220ENST00000487932 TRAV3A0A0B4J244 114 aa12.57□□□□□ -0.4
PKD1-220ENST00000487932 LYPD2Q6UXB3 125 aa12.57□□□□□ -0.4
PKD1-220ENST00000487932 TNFRSF14Q92956 283 aa12.57□□□□□ -0.4
PKD1-220ENST00000487932 ZMAT4Q9H898 229 aa12.57□□□□□ -0.4
PKD1-220ENST00000487932 ARAP2Q8WZ64 1704 aa12.57□□□□□ -0.4
PKD1-220ENST00000487932 TRAV9-1A0A075B6T8 112 aa12.57□□□□□ -0.4
PKD1-220ENST00000487932 A0A087WV48 116 aa12.57□□□□□ -0.4
PKD1-220ENST00000487932 C22orf46C9J442 243 aa12.57□□□□□ -0.4
PKD1-220ENST00000487932 BUB1B-PAK6H3BSN5 160 aa12.57□□□□□ -0.4
PKD1-220ENST00000487932 VCYO14598 125 aa12.57□□□□□ -0.4
PKD1-220ENST00000487932 TSKUQ8WUA8 353 aa12.57□□□□□ -0.4
PKD1-220ENST00000487932 LINC00271P0C7V0 271 aa12.57□□□□□ -0.4
PKD1-220ENST00000487932 SLC25A16P16260 332 aa12.57□□□□□ -0.4
PKD1-220ENST00000487932 BMPERQ8N8U9 685 aa12.57□□□□□ -0.4
PKD1-220ENST00000487932 LY75O60449 1722 aa12.57□□□□□ -0.4
PKD1-220ENST00000487932 TNFSF13O75888 250 aa12.56□□□□□ -0.4
PKD1-220ENST00000487932 CD5P06127 495 aa12.56□□□□□ -0.4
PKD1-220ENST00000487932 CLPSL2Q6UWE3 100 aa12.56□□□□□ -0.4
PKD1-220ENST00000487932 GAGE12BA1L429 117 aa12.56□□□□□ -0.4
PKD1-220ENST00000487932 GAGE7O76087 117 aa12.56□□□□□ -0.4
PKD1-220ENST00000487932 GAGE12FP0CL80 117 aa12.56□□□□□ -0.4
PKD1-220ENST00000487932 GAGE12GP0CL81 117 aa12.56□□□□□ -0.4
PKD1-220ENST00000487932 GAGE12IP0CL82 117 aa12.56□□□□□ -0.4
PKD1-220ENST00000487932 CD177Q8N6Q3 437 aa12.56□□□□□ -0.4
PKD1-220ENST00000487932 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.56□□□□□ -0.4
PKD1-220ENST00000487932 A0A1W2PRE2 83 aa12.56□□□□□ -0.4
PKD1-220ENST00000487932 HAPLN4Q86UW8 402 aa12.56□□□□□ -0.4
PKD1-220ENST00000487932 VWCEQ96DN2 955 aa12.56□□□□□ -0.4
PKD1-220ENST00000487932 OSTCQ9NRP0 149 aa12.56□□□□□ -0.4
PKD1-220ENST00000487932 AHCTF1Q8WYP5 2266 aa12.56□□□□□ -0.4
PKD1-220ENST00000487932 INTS1Q8N201 2190 aaKnown RBP12.56□□□□□ -0.4
PKD1-220ENST00000487932 PMVKQ15126 192 aa12.56□□□□□ -0.4
PKD1-220ENST00000487932 C5orf64Q2M2E5 130 aa12.56□□□□□ -0.4
PKD1-220ENST00000487932 LINC01619G3V211 115 aa12.55□□□□□ -0.4
PKD1-220ENST00000487932 NXPH4O95158 308 aa12.55□□□□□ -0.4
PKD1-220ENST00000487932 TIMM21Q9BVV7 248 aa12.55□□□□□ -0.4
PKD1-220ENST00000487932 A0A1B0GWJ7 208 aa12.55□□□□□ -0.4
PKD1-220ENST00000487932 ZFP36L1Q07352 338 aaKnown RBP12.55□□□□□ -0.4
PKD1-220ENST00000487932 USMG5Q96IX5 58 aa12.55□□□□□ -0.4
PKD1-220ENST00000487932 TRAV9-2A0A087WT02 112 aa12.55□□□□□ -0.4
PKD1-220ENST00000487932 SHISA3A0PJX4 238 aa12.55□□□□□ -0.4
PKD1-220ENST00000487932 FAM223BA6NKX1 122 aa12.55□□□□□ -0.4
PKD1-220ENST00000487932 FAM223AQ8IWN6 122 aa12.55□□□□□ -0.4
PKD1-220ENST00000487932 H3BMM0 161 aa12.55□□□□□ -0.4
PKD1-220ENST00000487932 SRSF3P84103 164 aaKnown RBP12.55□□□□□ -0.4
PKD1-220ENST00000487932 SPINK13Q1W4C9 94 aa12.55□□□□□ -0.4
PKD1-220ENST00000487932 PRR30Q53SZ7 412 aaPredicted RBP12.55□□□□□ -0.4
PKD1-220ENST00000487932 UBE2WQ96B02 151 aa12.55□□□□□ -0.4
PKD1-220ENST00000487932 RASL11AQ6T310 242 aa12.55□□□□□ -0.4
PKD1-220ENST00000487932 CHCHD1Q96BP2 118 aaKnown RBP12.55□□□□□ -0.4
PKD1-220ENST00000487932 PLSCR4Q9NRQ2 329 aa12.55□□□□□ -0.4
PKD1-220ENST00000487932 ATAD5Q96QE3 1844 aa12.54□□□□□ -0.4
PKD1-220ENST00000487932 LINC00518Q8N0U6 118 aa12.54□□□□□ -0.4
PKD1-220ENST00000487932 IGHV3-38A0A0C4DH36 116 aa12.54□□□□□ -0.4
PKD1-220ENST00000487932 MYMXA0A1B0GTQ4 84 aa12.54□□□□□ -0.4
PKD1-220ENST00000487932 C9orf139Q6ZV77 190 aa12.54□□□□□ -0.4
PKD1-220ENST00000487932 NR2C2APQ86WQ0 139 aa12.54□□□□□ -0.4
PKD1-220ENST00000487932 IGKV1-9A0A0C4DH69 117 aa12.54□□□□□ -0.4
PKD1-220ENST00000487932 GAGE6Q13070 117 aa12.54□□□□□ -0.4
PKD1-220ENST00000487932 TMEM170AQ8WVE7 144 aa12.54□□□□□ -0.4
PKD1-220ENST00000487932 AZU1P20160 251 aa12.53□□□□□ -0.4
PKD1-220ENST00000487932 NABP1Q96AH0 204 aa12.53□□□□□ -0.4
PKD1-220ENST00000487932 LAMB2P55268 1798 aa12.53□□□□□ -0.4
PKD1-220ENST00000487932 SIGMAR1Q99720 223 aa12.53□□□□□ -0.4
PKD1-220ENST00000487932 TREML4Q6UXN2 200 aa12.53□□□□□ -0.4
PKD1-220ENST00000487932 TMEM158Q8WZ71 300 aa12.53□□□□□ -0.4
PKD1-220ENST00000487932 SLC25A48Q6ZT89 311 aaKnown RBP12.53□□□□□ -0.4
PKD1-220ENST00000487932 WFDC1Q9HC57 220 aa12.53□□□□□ -0.4
PKD1-220ENST00000487932 A0A0A6YYD4 124 aa12.53□□□□□ -0.4
PKD1-220ENST00000487932 M0R1W7 72 aa12.53□□□□□ -0.4
PKD1-220ENST00000487932 C5orf24Q7Z6I8 188 aa12.53□□□□□ -0.4
PKD1-220ENST00000487932 DNAJC30Q96LL9 226 aa12.53□□□□□ -0.4
PKD1-220ENST00000487932 H0YJW9 148 aa12.52□□□□□ -0.4
PKD1-220ENST00000487932 LINC00205P59089 165 aa12.52□□□□□ -0.4
PKD1-220ENST00000487932 ZDBF2Q9HCK1 2354 aa12.52□□□□□ -0.4
PKD1-220ENST00000487932 IL18BPO95998 194 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms