RNA–Protein interactions for RNA: ENST00000486758.5

SHROOM3-208, Transcript of shroom family member 3, humanhuman

TSL 2

Gene SHROOM3, Length 3,766 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-208ENST00000486758 TNRC6AQ8NDV7 1962 aaKnown RBP10.06□□□□□ -0.8
SHROOM3-208ENST00000486758 ZNF292O60281 2723 aa10.06□□□□□ -0.8
SHROOM3-208ENST00000486758 KMT2EQ8IZD2 1858 aa10.05□□□□□ -0.8
SHROOM3-208ENST00000486758 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.05□□□□□ -0.8
SHROOM3-208ENST00000486758 NDUFS8O00217 210 aa10.05□□□□□ -0.8
SHROOM3-208ENST00000486758 MMP23AO75900 390 aa10.05□□□□□ -0.8
SHROOM3-208ENST00000486758 GOSR1O95249 250 aa10.05□□□□□ -0.8
SHROOM3-208ENST00000486758 KRTAP27-1Q3LI81 207 aa10.05□□□□□ -0.8
SHROOM3-208ENST00000486758 MORN5Q5VZ52 161 aa10.05□□□□□ -0.8
SHROOM3-208ENST00000486758 ZNF474Q6S9Z5 364 aaPredicted RBP10.05□□□□□ -0.8
SHROOM3-208ENST00000486758 THYN1Q9P016 225 aa10.05□□□□□ -0.8
SHROOM3-208ENST00000486758 ONECUT1Q9UBC0 465 aa10.05□□□□□ -0.8
SHROOM3-208ENST00000486758 CELSR1Q9NYQ6 3014 aa10.05□□□□□ -0.8
SHROOM3-208ENST00000486758 SUB1P53999 127 aaKnown RBP eCLIP10.05□□□□□ -0.8
SHROOM3-208ENST00000486758 PSG9Q00887 426 aa10.05□□□□□ -0.8
SHROOM3-208ENST00000486758 HECTD1Q9ULT8 2610 aa10.05□□□□□ -0.8
SHROOM3-208ENST00000486758 SAP30O75446 220 aa10.05□□□□□ -0.8
SHROOM3-208ENST00000486758 APOHP02749 345 aaPredicted RBP10.05□□□□□ -0.8
SHROOM3-208ENST00000486758 GCSHP23434 173 aa10.05□□□□□ -0.8
SHROOM3-208ENST00000486758 GLRXP35754 106 aa10.05□□□□□ -0.8
SHROOM3-208ENST00000486758 GOLT1AQ6ZVE7 132 aa10.05□□□□□ -0.8
SHROOM3-208ENST00000486758 MRPL20Q9BYC9 149 aaKnown RBP10.05□□□□□ -0.8
SHROOM3-208ENST00000486758 TLN2Q9Y4G6 2542 aa10.05□□□□□ -0.8
SHROOM3-208ENST00000486758 IGHV3-35A0A0C4DH35 117 aa10.04□□□□□ -0.8
SHROOM3-208ENST00000486758 GNG7O60262 68 aa10.04□□□□□ -0.8
SHROOM3-208ENST00000486758 PRB1P04280 392 aa10.04□□□□□ -0.8
SHROOM3-208ENST00000486758 PLP1P60201 277 aa10.04□□□□□ -0.8
SHROOM3-208ENST00000486758 C11orf53Q8IXP5 236 aa10.04□□□□□ -0.8
SHROOM3-208ENST00000486758 SRRM5B3KS81 715 aa10.04□□□□□ -0.8
SHROOM3-208ENST00000486758 IGKV3-15P01624 115 aa10.04□□□□□ -0.8
SHROOM3-208ENST00000486758 GPR183P32249 361 aa10.04□□□□□ -0.8
SHROOM3-208ENST00000486758 VDAC2P45880 294 aaPredicted RBP10.04□□□□□ -0.8
SHROOM3-208ENST00000486758 FAM222BQ8WU58 562 aa10.04□□□□□ -0.8
SHROOM3-208ENST00000486758 ABHD17AQ96GS6 310 aa10.04□□□□□ -0.8
SHROOM3-208ENST00000486758 GRAMD2BQ96HH9 432 aa10.04□□□□□ -0.8
SHROOM3-208ENST00000486758 TRAV30A0A087WSZ9 112 aa10.04□□□□□ -0.8
SHROOM3-208ENST00000486758 TEX50A0A1B0GTY4 177 aa10.04□□□□□ -0.8
SHROOM3-208ENST00000486758 YPEL1O60688 119 aa10.04□□□□□ -0.8
SHROOM3-208ENST00000486758 FAM87AP0C7U9 286 aa10.04□□□□□ -0.8
SHROOM3-208ENST00000486758 CT45A10P0DMU9 189 aa10.04□□□□□ -0.8
SHROOM3-208ENST00000486758 CD40P25942 277 aa10.04□□□□□ -0.8
SHROOM3-208ENST00000486758 FAM162BQ5T6X4 162 aa10.04□□□□□ -0.8
SHROOM3-208ENST00000486758 Q8TCH9 128 aa10.04□□□□□ -0.8
SHROOM3-208ENST00000486758 YPEL2Q96QA6 119 aa10.04□□□□□ -0.8
SHROOM3-208ENST00000486758 IFI27L2Q9H2X8 130 aa10.04□□□□□ -0.8
SHROOM3-208ENST00000486758 AP5S1Q9NUS5 200 aa10.04□□□□□ -0.8
SHROOM3-208ENST00000486758 PEF1Q9UBV8 284 aaKnown RBP10.04□□□□□ -0.8
SHROOM3-208ENST00000486758 HSPB8Q9UJY1 196 aa10.04□□□□□ -0.8
SHROOM3-208ENST00000486758 MRPS16Q9Y3D3 137 aaKnown RBP10.04□□□□□ -0.8
SHROOM3-208ENST00000486758 C2CD3Q4AC94 2353 aa10.04□□□□□ -0.8
SHROOM3-208ENST00000486758 PPIAL4EA0A075B759 164 aa10.03□□□□□ -0.8
SHROOM3-208ENST00000486758 IGHV2-26A0A0B4J1V2 119 aa10.03□□□□□ -0.8
SHROOM3-208ENST00000486758 SYS1-DBNDD2H3BUS1 97 aa10.03□□□□□ -0.8
SHROOM3-208ENST00000486758 SAA1P0DJI8 122 aaPredicted RBP10.03□□□□□ -0.8
SHROOM3-208ENST00000486758 PPIAL4FP0DN26 164 aa10.03□□□□□ -0.8
SHROOM3-208ENST00000486758 CDKN1BP46527 198 aa10.03□□□□□ -0.8
SHROOM3-208ENST00000486758 CSN1S1P47710 185 aa10.03□□□□□ -0.8
SHROOM3-208ENST00000486758 BSPH1Q075Z2 132 aa10.03□□□□□ -0.8
SHROOM3-208ENST00000486758 TEX45Q8NA69 505 aa10.03□□□□□ -0.8
SHROOM3-208ENST00000486758 KBTBD11-OT1A0A1B0GTJ5 212 aa10.03□□□□□ -0.8
SHROOM3-208ENST00000486758 MSMPQ1L6U9 139 aa10.03□□□□□ -0.8
SHROOM3-208ENST00000486758 MRPL52Q86TS9 123 aaKnown RBP10.03□□□□□ -0.8
SHROOM3-208ENST00000486758 LINC01560Q8TB33 94 aa10.03□□□□□ -0.8
SHROOM3-208ENST00000486758 ZNF714Q96N38 554 aa10.03□□□□□ -0.8
SHROOM3-208ENST00000486758 TMUB1Q9BVT8 246 aa10.03□□□□□ -0.8
SHROOM3-208ENST00000486758 IDI2-AS1Q9NZ38 188 aa10.03□□□□□ -0.8
SHROOM3-208ENST00000486758 IGHV3OR16-8A0A075B7F1 116 aa10.03□□□□□ -0.8
SHROOM3-208ENST00000486758 LY6HO94772 140 aa10.03□□□□□ -0.8
SHROOM3-208ENST00000486758 KIR2DS2P43631 304 aa10.03□□□□□ -0.8
SHROOM3-208ENST00000486758 OR1L8Q8NGR8 309 aa10.03□□□□□ -0.8
SHROOM3-208ENST00000486758 IGFBPL1Q8WX77 278 aa10.03□□□□□ -0.8
SHROOM3-208ENST00000486758 NEUROG1Q92886 237 aa10.03□□□□□ -0.8
SHROOM3-208ENST00000486758 SLC25A33Q9BSK2 321 aa10.03□□□□□ -0.8
SHROOM3-208ENST00000486758 COL5A1P20908 1838 aaPredicted RBP10.03□□□□□ -0.8
SHROOM3-208ENST00000486758 IGHV1-46P01743 117 aa10.02□□□□□ -0.8
SHROOM3-208ENST00000486758 TIMM23BQ5SRD1 257 aa10.02□□□□□ -0.8
SHROOM3-208ENST00000486758 CIARTQ8N365 385 aaPredicted RBP10.02□□□□□ -0.8
SHROOM3-208ENST00000486758 SPRY4Q9C004 299 aa10.02□□□□□ -0.8
SHROOM3-208ENST00000486758 IGLC7A0M8Q6 106 aa10.02□□□□□ -0.81
SHROOM3-208ENST00000486758 NBEAP1P0C6P0 100 aa10.02□□□□□ -0.81
SHROOM3-208ENST00000486758 SCGB2A2Q13296 93 aa10.02□□□□□ -0.81
SHROOM3-208ENST00000486758 SLC25A15Q9Y619 301 aa10.02□□□□□ -0.81
SHROOM3-208ENST00000486758 SONP18583 2426 aaKnown RBP10.02□□□□□ -0.81
SHROOM3-208ENST00000486758 LOC105371242A0A075B767 164 aa10.02□□□□□ -0.81
SHROOM3-208ENST00000486758 SSBP2P81877 361 aaPredicted RBP10.02□□□□□ -0.81
SHROOM3-208ENST00000486758 LY6DQ14210 128 aa10.02□□□□□ -0.81
SHROOM3-208ENST00000486758 ZNF430Q9H8G1 570 aaPredicted RBP10.02□□□□□ -0.81
SHROOM3-208ENST00000486758 NGBQ9NPG2 151 aa10.02□□□□□ -0.81
SHROOM3-208ENST00000486758 ADAMTS20P59510 1910 aa10.02□□□□□ -0.81
SHROOM3-208ENST00000486758 LIPFP07098 398 aa10.01□□□□□ -0.81
SHROOM3-208ENST00000486758 PRSS1P07477 247 aa10.01□□□□□ -0.81
SHROOM3-208ENST00000486758 PNKDQ8N490 385 aa10.01□□□□□ -0.81
SHROOM3-208ENST00000486758 IGHV2-70DA0A0C4DH43 119 aa10.01□□□□□ -0.81
SHROOM3-208ENST00000486758 NCBP2LA6PVI3 153 aaKnown RBP10.01□□□□□ -0.81
SHROOM3-208ENST00000486758 PROP1O75360 226 aa10.01□□□□□ -0.81
SHROOM3-208ENST00000486758 TMEM95Q3KNT9 176 aa10.01□□□□□ -0.81
SHROOM3-208ENST00000486758 RPEQ96AT9 228 aa10.01□□□□□ -0.81
SHROOM3-208ENST00000486758 ADTRPQ96IZ2 230 aa10.01□□□□□ -0.81
SHROOM3-208ENST00000486758 RPP21Q9H633 154 aaKnown RBP10.01□□□□□ -0.81
SHROOM3-208ENST00000486758 A6NDN8 102 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms