RNA–Protein interactions for RNA: ENST00000485441.5

SRRM1-213, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-213ENST00000485441 SPANXN3Q5MJ09 141 aa1.87□□□□□ -2.11
SRRM1-213ENST00000485441 LYRM7Q5U5X0 104 aa1.87□□□□□ -2.11
SRRM1-213ENST00000485441 IZUMO2Q6UXV1 221 aa1.87□□□□□ -2.11
SRRM1-213ENST00000485441 DNMBPQ6XZF7 1577 aa1.87□□□□□ -2.11
SRRM1-213ENST00000485441 ZNF705AQ6ZN79 300 aaPredicted RBP1.87□□□□□ -2.11
SRRM1-213ENST00000485441 KTN1-AS1Q86SY8 53 aa1.87□□□□□ -2.11
SRRM1-213ENST00000485441 LRRC28Q86X40 367 aaPredicted RBP1.87□□□□□ -2.11
SRRM1-213ENST00000485441 C12orf29Q8N999 325 aa1.87□□□□□ -2.11
SRRM1-213ENST00000485441 PLEKHB2Q96CS7 222 aa1.87□□□□□ -2.11
SRRM1-213ENST00000485441 MALSU1Q96EH3 234 aa1.87□□□□□ -2.11
SRRM1-213ENST00000485441 NAT8Q9UHE5 227 aa1.87□□□□□ -2.11
SRRM1-213ENST00000485441 TIMM9Q9Y5J7 89 aa1.87□□□□□ -2.11
SRRM1-213ENST00000485441 IQSEC2Q5JU85 1478 aa1.87□□□□□ -2.11
SRRM1-213ENST00000485441 MAGI1Q96QZ7 1491 aaPredicted RBP1.87□□□□□ -2.11
SRRM1-213ENST00000485441 EML6Q6ZMW3 1958 aa1.87□□□□□ -2.11
SRRM1-213ENST00000485441 KIF13AQ9H1H9 1805 aa1.87□□□□□ -2.11
SRRM1-213ENST00000485441 KIF21AQ7Z4S6 1674 aa1.86□□□□□ -2.11
SRRM1-213ENST00000485441 UHRF1BP1Q6BDS2 1440 aa1.86□□□□□ -2.11
SRRM1-213ENST00000485441 A0A0D9SEW6 157 aa1.86□□□□□ -2.11
SRRM1-213ENST00000485441 A0A1W2PRE2 83 aa1.86□□□□□ -2.11
SRRM1-213ENST00000485441 ZNF860A6NHJ4 632 aa1.86□□□□□ -2.11
SRRM1-213ENST00000485441 RIIAD1A6NNX1 92 aa1.86□□□□□ -2.11
SRRM1-213ENST00000485441 CST8O60676 142 aa1.86□□□□□ -2.11
SRRM1-213ENST00000485441 BANF1O75531 89 aa1.86□□□□□ -2.11
SRRM1-213ENST00000485441 PPBPP02775 128 aa1.86□□□□□ -2.11
SRRM1-213ENST00000485441 SHBGP04278 402 aa1.86□□□□□ -2.11
SRRM1-213ENST00000485441 IFNA4P05014 189 aa1.86□□□□□ -2.11
SRRM1-213ENST00000485441 OGNP20774 298 aaKnown RBP1.86□□□□□ -2.11
SRRM1-213ENST00000485441 S100GP29377 79 aa1.86□□□□□ -2.11
SRRM1-213ENST00000485441 SLC38A11Q08AI6 406 aa1.86□□□□□ -2.11
SRRM1-213ENST00000485441 SMCO1Q147U7 214 aa1.86□□□□□ -2.11
SRRM1-213ENST00000485441 FAM27BQ5VT28 67 aa1.86□□□□□ -2.11
SRRM1-213ENST00000485441 TOMM20LQ6UXN7 152 aa1.86□□□□□ -2.11
SRRM1-213ENST00000485441 ARPINQ7Z6K5 226 aa1.86□□□□□ -2.11
SRRM1-213ENST00000485441 MMGT1Q8N4V1 131 aa1.86□□□□□ -2.11
SRRM1-213ENST00000485441 RPP25LQ8N5L8 163 aaKnown RBP1.86□□□□□ -2.11
SRRM1-213ENST00000485441 OR10J5Q8NHC4 309 aa1.86□□□□□ -2.11
SRRM1-213ENST00000485441 TERB2Q8NHR7 220 aa1.86□□□□□ -2.11
SRRM1-213ENST00000485441 LRTM1Q9HBL6 345 aa1.86□□□□□ -2.11
SRRM1-213ENST00000485441 SLC39A9Q9NUM3 307 aa1.86□□□□□ -2.11
SRRM1-213ENST00000485441 ASB4Q9Y574 426 aa1.86□□□□□ -2.11
SRRM1-213ENST00000485441 MYH10P35580 1976 aa1.86□□□□□ -2.11
SRRM1-213ENST00000485441 BRWD1Q9NSI6 2320 aa1.86□□□□□ -2.11
SRRM1-213ENST00000485441 NKTRP30414 1462 aaKnown RBP1.86□□□□□ -2.11
SRRM1-213ENST00000485441 CCDC18Q5T9S5 1454 aa1.86□□□□□ -2.11
SRRM1-213ENST00000485441 XIRP1Q702N8 1843 aaKnown RBP1.86□□□□□ -2.11
SRRM1-213ENST00000485441 ADGBQ8N7X0 1667 aa1.86□□□□□ -2.11
SRRM1-213ENST00000485441 TRANK1O15050 2925 aa1.86□□□□□ -2.11
SRRM1-213ENST00000485441 TOPBP1Q92547 1522 aa1.86□□□□□ -2.11
SRRM1-213ENST00000485441 RGS12O14924 1447 aa1.85□□□□□ -2.11
SRRM1-213ENST00000485441 KDM6AO15550 1401 aaPredicted RBP1.85□□□□□ -2.11
SRRM1-213ENST00000485441 NAIPQ13075 1403 aa1.85□□□□□ -2.11
SRRM1-213ENST00000485441 SHROOM2Q13796 1616 aa1.85□□□□□ -2.11
SRRM1-213ENST00000485441 MAST4O15021 2626 aa1.85□□□□□ -2.11
SRRM1-213ENST00000485441 OR51F1A6NGY5 319 aa1.85□□□□□ -2.11
SRRM1-213ENST00000485441 APOA2P02652 100 aa1.85□□□□□ -2.11
SRRM1-213ENST00000485441 SMIM6P0DI80 62 aa1.85□□□□□ -2.11
SRRM1-213ENST00000485441 S100A4P26447 101 aaKnown RBP1.85□□□□□ -2.11
SRRM1-213ENST00000485441 ZNF846Q147U1 533 aa1.85□□□□□ -2.11
SRRM1-213ENST00000485441 KISS1Q15726 138 aa1.85□□□□□ -2.11
SRRM1-213ENST00000485441 LTC4SQ16873 150 aa1.85□□□□□ -2.11
SRRM1-213ENST00000485441 RRN3P1Q2M238 152 aa1.85□□□□□ -2.11
SRRM1-213ENST00000485441 LINC01554Q52M75 96 aa1.85□□□□□ -2.11
SRRM1-213ENST00000485441 TMEM128Q5BJH2 165 aa1.85□□□□□ -2.11
SRRM1-213ENST00000485441 TMEM35BQ8NCS4 154 aa1.85□□□□□ -2.11
SRRM1-213ENST00000485441 NUP35Q8NFH5 326 aa1.85□□□□□ -2.11
SRRM1-213ENST00000485441 OR52R1Q8NGF1 315 aa1.85□□□□□ -2.11
SRRM1-213ENST00000485441 MAFIPQ8WZ33 124 aa1.85□□□□□ -2.11
SRRM1-213ENST00000485441 MAGOHBQ96A72 148 aaKnown RBP1.85□□□□□ -2.11
SRRM1-213ENST00000485441 PFDN5Q99471 154 aa1.85□□□□□ -2.11
SRRM1-213ENST00000485441 Q9H521 79 aa1.85□□□□□ -2.11
SRRM1-213ENST00000485441 HSPB11Q9Y547 144 aa1.85□□□□□ -2.11
SRRM1-213ENST00000485441 NRXN1Q9ULB1 1477 aa1.85□□□□□ -2.11
SRRM1-213ENST00000485441 EPRSP07814 1512 aaKnown RBP1.85□□□□□ -2.11
SRRM1-213ENST00000485441 MUC6Q6W4X9 2439 aa1.85□□□□□ -2.11
SRRM1-213ENST00000485441 MED23Q9ULK4 1368 aa1.85□□□□□ -2.11
SRRM1-213ENST00000485441 SDK1Q7Z5N4 2213 aa1.85□□□□□ -2.11
SRRM1-213ENST00000485441 NUP210Q8TEM1 1887 aaPredicted RBP1.84□□□□□ -2.11
SRRM1-213ENST00000485441 MRC2Q9UBG0 1479 aa1.84□□□□□ -2.11
SRRM1-213ENST00000485441 DUXBA0A1W2PPF3 345 aa1.84□□□□□ -2.11
SRRM1-213ENST00000485441 E7EQ34 232 aa1.84□□□□□ -2.11
SRRM1-213ENST00000485441 C19orf84I3L1E1 186 aa1.84□□□□□ -2.11
SRRM1-213ENST00000485441 CYB5BO43169 146 aa1.84□□□□□ -2.11
SRRM1-213ENST00000485441 PIAS1O75925 651 aa1.84□□□□□ -2.11
SRRM1-213ENST00000485441 S100A8P05109 93 aa1.84□□□□□ -2.11
SRRM1-213ENST00000485441 SCGB1A1P11684 91 aa1.84□□□□□ -2.11
SRRM1-213ENST00000485441 COX4I1P13073 169 aa1.84□□□□□ -2.11
SRRM1-213ENST00000485441 AQP4P55087 323 aa1.84□□□□□ -2.11
SRRM1-213ENST00000485441 SURF2Q15527 256 aaPredicted RBP1.84□□□□□ -2.11
SRRM1-213ENST00000485441 SAMD13Q5VXD3 122 aa1.84□□□□□ -2.11
SRRM1-213ENST00000485441 RPL13AP3Q6NVV1 102 aa1.84□□□□□ -2.11
SRRM1-213ENST00000485441 SKA2Q8WVK7 121 aaPredicted RBP1.84□□□□□ -2.11
SRRM1-213ENST00000485441 ISOC1Q96CN7 298 aa1.84□□□□□ -2.11
SRRM1-213ENST00000485441 C2orf88Q9BSF0 95 aa1.84□□□□□ -2.11
SRRM1-213ENST00000485441 EFCAB11Q9BUY7 163 aa1.84□□□□□ -2.11
SRRM1-213ENST00000485441 TMEM133Q9H2Q1 129 aa1.84□□□□□ -2.11
SRRM1-213ENST00000485441 NIT2Q9NQR4 276 aa1.84□□□□□ -2.11
SRRM1-213ENST00000485441 FAM135AQ9P2D6 1515 aa1.84□□□□□ -2.11
SRRM1-213ENST00000485441 CFAP74Q9C0B2 1584 aa1.84□□□□□ -2.12
SRRM1-213ENST00000485441 FAM135BQ49AJ0 1406 aa1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms