RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 COL11A1P12107 1806 aaPredicted RBP1.44□□□□□ -2.18
SMC4-215ENST00000484799 TAF1LQ8IZX4 1826 aa1.43□□□□□ -2.18
SMC4-215ENST00000484799 PBRM1Q86U86 1689 aa1.43□□□□□ -2.18
SMC4-215ENST00000484799 ANAPC1Q9H1A4 1944 aa1.43□□□□□ -2.18
SMC4-215ENST00000484799 TRAV1-1A0A0B4J248 108 aa1.43□□□□□ -2.18
SMC4-215ENST00000484799 GPR31O00270 319 aa1.43□□□□□ -2.18
SMC4-215ENST00000484799 OR1I1O60431 355 aa1.43□□□□□ -2.18
SMC4-215ENST00000484799 ARL14EPLP0DKL9 152 aa1.43□□□□□ -2.18
SMC4-215ENST00000484799 MGST1P10620 155 aaKnown RBP1.43□□□□□ -2.18
SMC4-215ENST00000484799 NFYBP25208 207 aa1.43□□□□□ -2.18
SMC4-215ENST00000484799 BRS3P32247 399 aa1.43□□□□□ -2.18
SMC4-215ENST00000484799 PDE6HQ13956 83 aa1.43□□□□□ -2.18
SMC4-215ENST00000484799 SNCBQ16143 134 aa1.43□□□□□ -2.18
SMC4-215ENST00000484799 C10orf55Q5SWW7 151 aa1.43□□□□□ -2.18
SMC4-215ENST00000484799 PDZD9Q8IXQ8 264 aa1.43□□□□□ -2.18
SMC4-215ENST00000484799 FAM24BQ8N5W8 94 aa1.43□□□□□ -2.18
SMC4-215ENST00000484799 LINC00311Q8N616 119 aa1.43□□□□□ -2.18
SMC4-215ENST00000484799 DEFB119Q8N690 84 aa1.43□□□□□ -2.18
SMC4-215ENST00000484799 LINC00301Q8NCQ3 95 aa1.43□□□□□ -2.18
SMC4-215ENST00000484799 SLC25A21Q9BQT8 299 aaPredicted RBP1.43□□□□□ -2.18
SMC4-215ENST00000484799 MRPL32Q9BYC8 188 aaKnown RBP1.43□□□□□ -2.18
SMC4-215ENST00000484799 PCTPQ9UKL6 214 aa1.43□□□□□ -2.18
SMC4-215ENST00000484799 PCDH15Q96QU1 1955 aa1.43□□□□□ -2.18
SMC4-215ENST00000484799 TRAV5A0A0B4J249 113 aa1.42□□□□□ -2.18
SMC4-215ENST00000484799 TLCD2A6NGC4 264 aa1.42□□□□□ -2.18
SMC4-215ENST00000484799 TMEM256-PLSCR3K7ERE1 68 aa1.42□□□□□ -2.18
SMC4-215ENST00000484799 TIMM17BO60830 172 aa1.42□□□□□ -2.18
SMC4-215ENST00000484799 TRGC2P03986 189 aa1.42□□□□□ -2.18
SMC4-215ENST00000484799 HLA-EP13747 358 aa1.42□□□□□ -2.18
SMC4-215ENST00000484799 SSR2P43308 183 aa1.42□□□□□ -2.18
SMC4-215ENST00000484799 DYNLT3P51808 116 aa1.42□□□□□ -2.18
SMC4-215ENST00000484799 DR1Q01658 176 aa1.42□□□□□ -2.18
SMC4-215ENST00000484799 EIF5AL1Q6IS14 154 aaKnown RBP1.42□□□□□ -2.18
SMC4-215ENST00000484799 CROCCP2Q86T23 111 aa1.42□□□□□ -2.18
SMC4-215ENST00000484799 PPTC7Q8NI37 304 aa1.42□□□□□ -2.18
SMC4-215ENST00000484799 C4orf3Q8WVX3 66 aa1.42□□□□□ -2.18
SMC4-215ENST00000484799 ADAT1Q9BUB4 502 aaKnown RBP1.42□□□□□ -2.18
SMC4-215ENST00000484799 DDA1Q9BW61 102 aa1.42□□□□□ -2.18
SMC4-215ENST00000484799 C6orf62Q9GZU0 229 aaPredicted RBP1.42□□□□□ -2.18
SMC4-215ENST00000484799 BAZ2BQ9UIF8 2168 aaKnown RBP1.42□□□□□ -2.18
SMC4-215ENST00000484799 MYH3P11055 1940 aa1.42□□□□□ -2.18
SMC4-215ENST00000484799 MED12LQ86YW9 2145 aa1.42□□□□□ -2.18
SMC4-215ENST00000484799 ADGBQ8N7X0 1667 aa1.42□□□□□ -2.18
SMC4-215ENST00000484799 SORL1Q92673 2214 aa1.42□□□□□ -2.18
SMC4-215ENST00000484799 DOCK4Q8N1I0 1966 aa1.41□□□□□ -2.18
SMC4-215ENST00000484799 TRAV12-1A0A0B4J245 112 aa1.41□□□□□ -2.18
SMC4-215ENST00000484799 MAP1LC3B2A6NCE7 125 aa1.41□□□□□ -2.18
SMC4-215ENST00000484799 C2orf70A6NJV1 201 aa1.41□□□□□ -2.18
SMC4-215ENST00000484799 IFNA21P01568 189 aa1.41□□□□□ -2.18
SMC4-215ENST00000484799 RAB4BP61018 213 aa1.41□□□□□ -2.18
SMC4-215ENST00000484799 PLCXD2Q0VAA5 305 aa1.41□□□□□ -2.18
SMC4-215ENST00000484799 KRTAP21-3Q3LHN1 58 aa1.41□□□□□ -2.18
SMC4-215ENST00000484799 RNASE10Q5GAN6 216 aaKnown RBP1.41□□□□□ -2.18
SMC4-215ENST00000484799 TMEM78Q5T7P6 136 aa1.41□□□□□ -2.18
SMC4-215ENST00000484799 DCUN1D2Q6PH85 259 aa1.41□□□□□ -2.18
SMC4-215ENST00000484799 C3orf56Q8N813 242 aa1.41□□□□□ -2.18
SMC4-215ENST00000484799 OR4C6Q8NH72 309 aa1.41□□□□□ -2.18
SMC4-215ENST00000484799 SFT2D1Q8WV19 159 aa1.41□□□□□ -2.18
SMC4-215ENST00000484799 ANP32BQ92688 251 aaKnown RBP1.41□□□□□ -2.18
SMC4-215ENST00000484799 GPX7Q96SL4 187 aaPredicted RBP1.41□□□□□ -2.18
SMC4-215ENST00000484799 NPCDR1Q9BY65 106 aa1.41□□□□□ -2.18
SMC4-215ENST00000484799 MAP1LC3BQ9GZQ8 125 aa1.41□□□□□ -2.18
SMC4-215ENST00000484799 POPDC3Q9HBV1 291 aa1.41□□□□□ -2.18
SMC4-215ENST00000484799 SDK1Q7Z5N4 2213 aa1.4□□□□□ -2.18
SMC4-215ENST00000484799 E7EQ34 232 aa1.4□□□□□ -2.19
SMC4-215ENST00000484799 LYZL6O75951 148 aa1.4□□□□□ -2.19
SMC4-215ENST00000484799 GADD45GO95257 159 aa1.4□□□□□ -2.19
SMC4-215ENST00000484799 IFNA4P05014 189 aa1.4□□□□□ -2.19
SMC4-215ENST00000484799 CSN2P05814 226 aa1.4□□□□□ -2.19
SMC4-215ENST00000484799 GLRXP35754 106 aa1.4□□□□□ -2.19
SMC4-215ENST00000484799 C1orf140Q5VVS0 124 aa1.4□□□□□ -2.19
SMC4-215ENST00000484799 SOSTDC1Q6X4U4 206 aa1.4□□□□□ -2.19
SMC4-215ENST00000484799 OR10K1Q8NGX5 313 aa1.4□□□□□ -2.19
SMC4-215ENST00000484799 ISOC1Q96CN7 298 aa1.4□□□□□ -2.19
SMC4-215ENST00000484799 LY96Q9Y6Y9 160 aa1.4□□□□□ -2.19
SMC4-215ENST00000484799 CD109Q6YHK3 1445 aa1.4□□□□□ -2.19
SMC4-215ENST00000484799 ALPK2Q86TB3 2170 aa1.4□□□□□ -2.19
SMC4-215ENST00000484799 HEATR5BQ9P2D3 2071 aa1.39□□□□□ -2.19
SMC4-215ENST00000484799 COL4A1P02462 1669 aa1.39□□□□□ -2.19
SMC4-215ENST00000484799 COL4A5P29400 1685 aa1.39□□□□□ -2.19
SMC4-215ENST00000484799 HYPMO75409 117 aa1.39□□□□□ -2.19
SMC4-215ENST00000484799 DHFRP00374 187 aa1.39□□□□□ -2.19
SMC4-215ENST00000484799 IL9P15248 144 aa1.39□□□□□ -2.19
SMC4-215ENST00000484799 RTL8BQ17RB0 113 aa1.39□□□□□ -2.19
SMC4-215ENST00000484799 TOMM20LQ6UXN7 152 aa1.39□□□□□ -2.19
SMC4-215ENST00000484799 UNQ6190/PRO20217Q6UXQ8 127 aa1.39□□□□□ -2.19
SMC4-215ENST00000484799 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.39□□□□□ -2.19
SMC4-215ENST00000484799 DYDC1Q8WWB3 177 aa1.39□□□□□ -2.19
SMC4-215ENST00000484799 CCDC32Q9BV29 185 aa1.39□□□□□ -2.19
SMC4-215ENST00000484799 RASL12Q9NYN1 266 aa1.39□□□□□ -2.19
SMC4-215ENST00000484799 MED11Q9P086 117 aa1.39□□□□□ -2.19
SMC4-215ENST00000484799 NUBP2Q9Y5Y2 271 aa1.39□□□□□ -2.19
SMC4-215ENST00000484799 MYH10P35580 1976 aa1.39□□□□□ -2.19
SMC4-215ENST00000484799 EML6Q6ZMW3 1958 aa1.39□□□□□ -2.19
SMC4-215ENST00000484799 PIK3C2AO00443 1686 aa1.39□□□□□ -2.19
SMC4-215ENST00000484799 MICAL3Q7RTP6 2002 aa1.39□□□□□ -2.19
SMC4-215ENST00000484799 NUP98P52948 1817 aa1.38□□□□□ -2.19
SMC4-215ENST00000484799 TRPM1Q7Z4N2 1603 aa1.38□□□□□ -2.19
SMC4-215ENST00000484799 NUP210LQ5VU65 1888 aa1.38□□□□□ -2.19
SMC4-215ENST00000484799 TRAV3A0A0B4J244 114 aa1.38□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms