RNA–Protein interactions for RNA: ENST00000481040.1

COPA-203, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 3

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-203ENST00000481040 ADAMTS7Q9UKP4 1686 aa2.67□□□□□ -1.98
COPA-203ENST00000481040 A0A0G2JQZ4 141 aa2.67□□□□□ -1.98
COPA-203ENST00000481040 GADD45GO95257 159 aa2.67□□□□□ -1.98
COPA-203ENST00000481040 PMP2P02689 132 aa2.67□□□□□ -1.98
COPA-203ENST00000481040 TMBIM6P55061 237 aa2.67□□□□□ -1.98
COPA-203ENST00000481040 ARPP19P56211 112 aa2.67□□□□□ -1.98
COPA-203ENST00000481040 HES1Q14469 280 aa2.67□□□□□ -1.98
COPA-203ENST00000481040 ZNF345Q14585 488 aa2.67□□□□□ -1.98
COPA-203ENST00000481040 MSMO1Q15800 293 aa2.67□□□□□ -1.98
COPA-203ENST00000481040 OR8B3Q8NGG8 313 aa2.67□□□□□ -1.98
COPA-203ENST00000481040 NHP2Q9NX24 153 aaKnown RBP2.67□□□□□ -1.98
COPA-203ENST00000481040 GSKIPQ9P0R6 139 aa2.67□□□□□ -1.98
COPA-203ENST00000481040 TRAPPC2LQ9UL33 140 aa2.67□□□□□ -1.98
COPA-203ENST00000481040 RNF11Q9Y3C5 154 aa2.67□□□□□ -1.98
COPA-203ENST00000481040 CCDC88CQ9P219 2028 aa2.67□□□□□ -1.98
COPA-203ENST00000481040 CHD1O14646 1710 aa2.67□□□□□ -1.98
COPA-203ENST00000481040 BCL9O00512 1426 aa2.67□□□□□ -1.98
COPA-203ENST00000481040 NCAPD3P42695 1498 aa2.66□□□□□ -1.98
COPA-203ENST00000481040 MRC2Q9UBG0 1479 aa2.66□□□□□ -1.98
COPA-203ENST00000481040 IGKV1D-42A0A075B6H8 117 aa2.66□□□□□ -1.98
COPA-203ENST00000481040 A0A087WX48 190 aa2.66□□□□□ -1.98
COPA-203ENST00000481040 ZNF705FA8MVS1 300 aaPredicted RBP2.66□□□□□ -1.98
COPA-203ENST00000481040 GABARAPH6UMI1 98 aa2.66□□□□□ -1.98
COPA-203ENST00000481040 J3KT08 172 aa2.66□□□□□ -1.98
COPA-203ENST00000481040 SDCBPO00560 298 aaPredicted RBP2.66□□□□□ -1.98
COPA-203ENST00000481040 NAPSAO96009 420 aa2.66□□□□□ -1.98
COPA-203ENST00000481040 HLA-EP13747 358 aa2.66□□□□□ -1.98
COPA-203ENST00000481040 GTF2A1P52655 376 aaPredicted RBP2.66□□□□□ -1.98
COPA-203ENST00000481040 RPS28P62857 69 aaKnown RBP2.66□□□□□ -1.98
COPA-203ENST00000481040 MYL5Q02045 173 aa2.66□□□□□ -1.98
COPA-203ENST00000481040 SLC38A11Q08AI6 406 aa2.66□□□□□ -1.98
COPA-203ENST00000481040 EIF3IQ13347 325 aaKnown RBP2.66□□□□□ -1.98
COPA-203ENST00000481040 BRMS1LQ5PSV4 323 aa2.66□□□□□ -1.98
COPA-203ENST00000481040 EIF5AL1Q6IS14 154 aaKnown RBP2.66□□□□□ -1.98
COPA-203ENST00000481040 OR4D11Q8NGI4 311 aa2.66□□□□□ -1.98
COPA-203ENST00000481040 TIMM21Q9BVV7 248 aa2.66□□□□□ -1.98
COPA-203ENST00000481040 DIP2BQ9P265 1576 aa2.66□□□□□ -1.98
COPA-203ENST00000481040 XIRP1Q702N8 1843 aaKnown RBP2.65□□□□□ -1.98
COPA-203ENST00000481040 MPDZO75970 2070 aa2.65□□□□□ -1.98
COPA-203ENST00000481040 CEP152O94986 1710 aa2.65□□□□□ -1.98
COPA-203ENST00000481040 N4BP2Q86UW6 1770 aaPredicted RBP2.65□□□□□ -1.99
COPA-203ENST00000481040 CLASP1Q7Z460 1538 aa2.65□□□□□ -1.99
COPA-203ENST00000481040 IGKV3D-11A0A0A0MRZ8 115 aa2.65□□□□□ -1.99
COPA-203ENST00000481040 TRAV5A0A0B4J249 113 aa2.65□□□□□ -1.99
COPA-203ENST00000481040 DEGS1O15121 323 aa2.65□□□□□ -1.99
COPA-203ENST00000481040 CST7O76096 145 aa2.65□□□□□ -1.99
COPA-203ENST00000481040 HMGN1P05114 100 aa2.65□□□□□ -1.99
COPA-203ENST00000481040 OR8B8Q15620 311 aa2.65□□□□□ -1.99
COPA-203ENST00000481040 LZICQ8WZA0 190 aa2.65□□□□□ -1.99
COPA-203ENST00000481040 ZC2HC1AQ96GY0 325 aa2.65□□□□□ -1.99
COPA-203ENST00000481040 OR2H1Q9GZK4 316 aa2.65□□□□□ -1.99
COPA-203ENST00000481040 BCL2L10Q9HD36 194 aa2.65□□□□□ -1.99
COPA-203ENST00000481040 NAT8BQ9UHF3 227 aa2.65□□□□□ -1.99
COPA-203ENST00000481040 NUP98P52948 1817 aa2.65□□□□□ -1.99
COPA-203ENST00000481040 LAMC3Q9Y6N6 1575 aa2.65□□□□□ -1.99
COPA-203ENST00000481040 CUL9Q8IWT3 2517 aa2.65□□□□□ -1.99
COPA-203ENST00000481040 SBF1O95248 1867 aa2.65□□□□□ -1.99
COPA-203ENST00000481040 ABCC10Q5T3U5 1492 aa2.65□□□□□ -1.99
COPA-203ENST00000481040 IGLV3-9A0A075B6K5 115 aa2.64□□□□□ -1.99
COPA-203ENST00000481040 A0A1B0GX51 115 aa2.64□□□□□ -1.99
COPA-203ENST00000481040 IBA57-AS1B1ANH7 110 aa2.64□□□□□ -1.99
COPA-203ENST00000481040 OVOL1O14753 267 aa2.64□□□□□ -1.99
COPA-203ENST00000481040 NUMA1Q14980 2115 aa2.64□□□□□ -1.99
COPA-203ENST00000481040 TPRXLQ17RH7 258 aa2.64□□□□□ -1.99
COPA-203ENST00000481040 ZNF826PQ6ZT77 177 aa2.64□□□□□ -1.99
COPA-203ENST00000481040 BORCS5Q969J3 196 aa2.64□□□□□ -1.99
COPA-203ENST00000481040 CXCL16Q9H2A7 254 aa2.64□□□□□ -1.99
COPA-203ENST00000481040 SPANXCQ9NY87 97 aa2.64□□□□□ -1.99
COPA-203ENST00000481040 RASL12Q9NYN1 266 aa2.64□□□□□ -1.99
COPA-203ENST00000481040 TAS2R4Q9NYW5 299 aa2.64□□□□□ -1.99
COPA-203ENST00000481040 HS3ST2Q9Y278 367 aa2.64□□□□□ -1.99
COPA-203ENST00000481040 PTPRMP28827 1452 aa2.64□□□□□ -1.99
COPA-203ENST00000481040 NCKAP5O14513 1909 aa2.64□□□□□ -1.99
COPA-203ENST00000481040 COL4A2P08572 1712 aa2.63□□□□□ -1.99
COPA-203ENST00000481040 TRAV36DV7A0A075B6V5 113 aa2.63□□□□□ -1.99
COPA-203ENST00000481040 TRGV4A0A0C4DH28 118 aa2.63□□□□□ -1.99
COPA-203ENST00000481040 LY6LH3BQJ8 138 aa2.63□□□□□ -1.99
COPA-203ENST00000481040 K7ERJ3 54 aa2.63□□□□□ -1.99
COPA-203ENST00000481040 TIMM17BO60830 172 aa2.63□□□□□ -1.99
COPA-203ENST00000481040 HBBP68871 147 aa2.63□□□□□ -1.99
COPA-203ENST00000481040 ZNF181Q2M3W8 571 aa2.63□□□□□ -1.99
COPA-203ENST00000481040 TMEM155Q4W5P6 130 aa2.63□□□□□ -1.99
COPA-203ENST00000481040 PHF5AQ7RTV0 110 aaKnown RBP2.63□□□□□ -1.99
COPA-203ENST00000481040 TMEM229BQ8NBD8 167 aa2.63□□□□□ -1.99
COPA-203ENST00000481040 ZNF714Q96N38 554 aa2.63□□□□□ -1.99
COPA-203ENST00000481040 SMARCA4P51532 1647 aa2.63□□□□□ -1.99
COPA-203ENST00000481040 STRCQ7RTU9 1775 aa2.62□□□□□ -1.99
COPA-203ENST00000481040 RTEL1-TNFRSF6BF6WH68 1400 aa2.62□□□□□ -1.99
COPA-203ENST00000481040 UTRNP46939 3433 aa2.62□□□□□ -1.99
COPA-203ENST00000481040 TRAV3A0A0B4J244 114 aa2.62□□□□□ -1.99
COPA-203ENST00000481040 HIST1H2BKO60814 126 aa2.62□□□□□ -1.99
COPA-203ENST00000481040 LYZL6O75951 148 aa2.62□□□□□ -1.99
COPA-203ENST00000481040 HIST1H2BJP06899 126 aa2.62□□□□□ -1.99
COPA-203ENST00000481040 ESRGQ1W209 222 aa2.62□□□□□ -1.99
COPA-203ENST00000481040 CCDC153Q494R4 210 aa2.62□□□□□ -1.99
COPA-203ENST00000481040 SPANXN5Q5MJ07 72 aa2.62□□□□□ -1.99
COPA-203ENST00000481040 C9orf163Q8N9P6 203 aa2.62□□□□□ -1.99
COPA-203ENST00000481040 TCEAL2Q9H3H9 227 aaPredicted RBP2.62□□□□□ -1.99
COPA-203ENST00000481040 LHFPL6Q9Y693 200 aa2.62□□□□□ -1.99
COPA-203ENST00000481040 ANKRD31Q8N7Z5 1873 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms