RNA–Protein interactions for RNA: ENST00000480158.1

HERC4-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,438 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-210ENST00000480158 FAM229AH3BQW9 127 aa4.92□□□□□ -1.62
HERC4-210ENST00000480158 HMGB3O15347 200 aaKnown RBP4.92□□□□□ -1.62
HERC4-210ENST00000480158 SCGB2A1O75556 95 aa4.92□□□□□ -1.62
HERC4-210ENST00000480158 SNRPCP09234 159 aaKnown RBP4.92□□□□□ -1.62
HERC4-210ENST00000480158 C4BPBP20851 252 aa4.92□□□□□ -1.62
HERC4-210ENST00000480158 RELQ04864 619 aaPredicted RBP4.92□□□□□ -1.62
HERC4-210ENST00000480158 USF2Q15853 346 aaPredicted RBP4.92□□□□□ -1.62
HERC4-210ENST00000480158 LEMD1Q68G75 181 aa4.92□□□□□ -1.62
HERC4-210ENST00000480158 SPSB3Q6PJ21 355 aa4.92□□□□□ -1.62
HERC4-210ENST00000480158 Q6ZRG5 221 aa4.92□□□□□ -1.62
HERC4-210ENST00000480158 SLC51BQ86UW2 128 aa4.92□□□□□ -1.62
HERC4-210ENST00000480158 NDUFA11Q86Y39 141 aa4.92□□□□□ -1.62
HERC4-210ENST00000480158 DLX4Q92988 240 aaPredicted RBP4.92□□□□□ -1.62
HERC4-210ENST00000480158 SLC39A9Q9NUM3 307 aa4.92□□□□□ -1.62
HERC4-210ENST00000480158 GAR1Q9NY12 217 aaKnown RBP4.92□□□□□ -1.62
HERC4-210ENST00000480158 MPDU1O75352 247 aa4.92□□□□□ -1.62
HERC4-210ENST00000480158 TSPAN15O95858 294 aa4.92□□□□□ -1.62
HERC4-210ENST00000480158 TOMM40O96008 361 aa4.92□□□□□ -1.62
HERC4-210ENST00000480158 APOHP02749 345 aaPredicted RBP4.92□□□□□ -1.62
HERC4-210ENST00000480158 FCGR2BP31994 310 aaPredicted RBP4.92□□□□□ -1.62
HERC4-210ENST00000480158 FHITP49789 147 aa4.92□□□□□ -1.62
HERC4-210ENST00000480158 YPEL3P61236 119 aaPredicted RBP4.92□□□□□ -1.62
HERC4-210ENST00000480158 FAM106AQ4KMX7 169 aa4.92□□□□□ -1.62
HERC4-210ENST00000480158 FAM209BQ5JX69 171 aa4.92□□□□□ -1.62
HERC4-210ENST00000480158 ZNF600Q6ZNG1 722 aa4.92□□□□□ -1.62
HERC4-210ENST00000480158 PCNPQ8WW12 178 aaKnown RBP4.92□□□□□ -1.62
HERC4-210ENST00000480158 RNF125Q96EQ8 232 aa4.92□□□□□ -1.62
HERC4-210ENST00000480158 ZNF414Q96IQ9 312 aa4.92□□□□□ -1.62
HERC4-210ENST00000480158 GINS3Q9BRX5 216 aa4.92□□□□□ -1.62
HERC4-210ENST00000480158 A0A1B0GV50 99 aa4.91□□□□□ -1.62
HERC4-210ENST00000480158 COX7A2P2O60397 106 aa4.91□□□□□ -1.62
HERC4-210ENST00000480158 FABP1P07148 127 aa4.91□□□□□ -1.62
HERC4-210ENST00000480158 RPL29P47914 159 aaKnown RBP4.91□□□□□ -1.62
HERC4-210ENST00000480158 RAB2AP61019 212 aa4.91□□□□□ -1.62
HERC4-210ENST00000480158 SHISA2Q6UWI4 295 aa4.91□□□□□ -1.62
HERC4-210ENST00000480158 PATE2Q6UY27 113 aa4.91□□□□□ -1.62
HERC4-210ENST00000480158 SPATA3Q8NHX4 192 aa4.91□□□□□ -1.62
HERC4-210ENST00000480158 TMEM37Q8WXS4 190 aa4.91□□□□□ -1.62
HERC4-210ENST00000480158 GNPNAT1Q96EK6 184 aaPredicted RBP4.91□□□□□ -1.62
HERC4-210ENST00000480158 ZNF747Q9BV97 191 aa4.91□□□□□ -1.62
HERC4-210ENST00000480158 SLC25A22Q9H936 323 aa4.91□□□□□ -1.62
HERC4-210ENST00000480158 SEPSECSQ9HD40 501 aaKnown RBP4.91□□□□□ -1.62
HERC4-210ENST00000480158 IGKV3-7A0A075B6H7 116 aa4.91□□□□□ -1.62
HERC4-210ENST00000480158 TRAV5A0A0B4J249 113 aa4.91□□□□□ -1.62
HERC4-210ENST00000480158 HYPMO75409 117 aa4.91□□□□□ -1.62
HERC4-210ENST00000480158 SPP1P10451 314 aa4.91□□□□□ -1.62
HERC4-210ENST00000480158 ZP3P21754 424 aa4.91□□□□□ -1.62
HERC4-210ENST00000480158 SELENOTP62341 195 aa4.91□□□□□ -1.62
HERC4-210ENST00000480158 EIF5AP63241 154 aaKnown RBP4.91□□□□□ -1.62
HERC4-210ENST00000480158 FAM78BQ5VT40 261 aa4.91□□□□□ -1.62
HERC4-210ENST00000480158 MORN5Q5VZ52 161 aa4.91□□□□□ -1.62
HERC4-210ENST00000480158 SPATA31B1PQ5VZV4 182 aa4.91□□□□□ -1.62
HERC4-210ENST00000480158 FAM122CQ6P4D5 195 aa4.91□□□□□ -1.62
HERC4-210ENST00000480158 OR10G4Q8NGN3 311 aa4.91□□□□□ -1.62
HERC4-210ENST00000480158 OR10G9Q8NGN4 311 aa4.91□□□□□ -1.62
HERC4-210ENST00000480158 OR10G7Q8NGN6 311 aa4.91□□□□□ -1.62
HERC4-210ENST00000480158 ARV1Q9H2C2 271 aa4.91□□□□□ -1.62
HERC4-210ENST00000480158 TRRAPQ9Y4A5 3859 aa4.9□□□□□ -1.62
HERC4-210ENST00000480158 WI2-2373I1.2A0A1W2PRP0 233 aa4.9□□□□□ -1.62
HERC4-210ENST00000480158 NDUFA4O00483 81 aa4.9□□□□□ -1.62
HERC4-210ENST00000480158 KLF5Q13887 457 aaPredicted RBP4.9□□□□□ -1.62
HERC4-210ENST00000480158 AKR1C8PQ5T2L2 129 aa4.9□□□□□ -1.62
HERC4-210ENST00000480158 C10orf113Q5VZT2 155 aa4.9□□□□□ -1.62
HERC4-210ENST00000480158 LINC00305Q7Z4B0 112 aa4.9□□□□□ -1.62
HERC4-210ENST00000480158 GPHB5Q86YW7 130 aa4.9□□□□□ -1.62
HERC4-210ENST00000480158 STOML3Q8TAV4 291 aa4.9□□□□□ -1.62
HERC4-210ENST00000480158 FAM213BQ8TBF2 198 aa4.9□□□□□ -1.62
HERC4-210ENST00000480158 SCRT1Q9BWW7 348 aa4.9□□□□□ -1.62
HERC4-210ENST00000480158 PARD6GQ9BYG4 376 aaPredicted RBP4.9□□□□□ -1.62
HERC4-210ENST00000480158 DNAJC4Q9NNZ3 241 aa4.9□□□□□ -1.62
HERC4-210ENST00000480158 RPRMQ9NS64 109 aa4.9□□□□□ -1.62
HERC4-210ENST00000480158 PKD1L1Q8TDX9 2849 aa4.9□□□□□ -1.63
HERC4-210ENST00000480158 NPPCP23582 126 aa4.89□□□□□ -1.63
HERC4-210ENST00000480158 TEX261Q6UWH6 196 aa4.89□□□□□ -1.63
HERC4-210ENST00000480158 C1QL4Q86Z23 238 aa4.89□□□□□ -1.63
HERC4-210ENST00000480158 RPP25LQ8N5L8 163 aaKnown RBP4.89□□□□□ -1.63
HERC4-210ENST00000480158 OR4F17Q8NGA8 305 aa4.89□□□□□ -1.63
HERC4-210ENST00000480158 TMEM190Q8WZ59 177 aa4.89□□□□□ -1.63
HERC4-210ENST00000480158 OR4F4Q96R69 305 aa4.89□□□□□ -1.63
HERC4-210ENST00000480158 METTL26Q96S19 204 aa4.89□□□□□ -1.63
HERC4-210ENST00000480158 ATP6V0BQ99437 205 aa4.89□□□□□ -1.63
HERC4-210ENST00000480158 PSMG3Q9BT73 122 aaPredicted RBP4.89□□□□□ -1.63
HERC4-210ENST00000480158 RABAC1Q9UI14 185 aa4.89□□□□□ -1.63
HERC4-210ENST00000480158 HIGD1AQ9Y241 93 aa4.89□□□□□ -1.63
HERC4-210ENST00000480158 TIMM9Q9Y5J7 89 aa4.89□□□□□ -1.63
HERC4-210ENST00000480158 A0A1W2PPV4 95 aa4.89□□□□□ -1.63
HERC4-210ENST00000480158 H3BTX0 84 aa4.89□□□□□ -1.63
HERC4-210ENST00000480158 OVOL1O14753 267 aa4.89□□□□□ -1.63
HERC4-210ENST00000480158 SEC11BP0C7V7 166 aa4.89□□□□□ -1.63
HERC4-210ENST00000480158 M6PRP20645 277 aa4.89□□□□□ -1.63
HERC4-210ENST00000480158 RIPPLY3P57055 190 aa4.89□□□□□ -1.63
HERC4-210ENST00000480158 FHL3Q13643 280 aa4.89□□□□□ -1.63
HERC4-210ENST00000480158 ACOT6Q3I5F7 207 aaPredicted RBP4.89□□□□□ -1.63
HERC4-210ENST00000480158 EIF5AL1Q6IS14 154 aaKnown RBP4.89□□□□□ -1.63
HERC4-210ENST00000480158 MIR17HGQ75NE6 70 aa4.89□□□□□ -1.63
HERC4-210ENST00000480158 SSX7Q7RTT5 188 aa4.89□□□□□ -1.63
HERC4-210ENST00000480158 OR9G4Q8NGQ1 327 aa4.89□□□□□ -1.63
HERC4-210ENST00000480158 ELOVL1Q9BW60 279 aa4.89□□□□□ -1.63
HERC4-210ENST00000480158 SLC25A39Q9BZJ4 359 aaPredicted RBP4.89□□□□□ -1.63
HERC4-210ENST00000480158 DAZ1Q9NQZ3 744 aaKnown RBP4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms