RNA–Protein interactions for RNA: ENST00000479660.1

CLDN18-203, Transcript of claudin 18, humanhuman

TSL 2

Gene CLDN18, Length 2,039 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18-203ENST00000479660 CHRDL1Q9BU40 450 aa11.24□□□□□ -0.61
CLDN18-203ENST00000479660 UNC79Q9P2D8 2635 aa11.24□□□□□ -0.61
CLDN18-203ENST00000479660 OR2C1O95371 312 aa11.23□□□□□ -0.61
CLDN18-203ENST00000479660 SNRPCP09234 159 aaKnown RBP11.23□□□□□ -0.61
CLDN18-203ENST00000479660 ADMP35318 185 aa11.23□□□□□ -0.61
CLDN18-203ENST00000479660 ATP5G2Q06055 141 aa11.23□□□□□ -0.61
CLDN18-203ENST00000479660 EEF1AKMT3Q96AZ1 226 aa11.23□□□□□ -0.61
CLDN18-203ENST00000479660 SMCO4Q9NRQ5 59 aa11.23□□□□□ -0.61
CLDN18-203ENST00000479660 GAR1Q9NY12 217 aaKnown RBP11.23□□□□□ -0.61
CLDN18-203ENST00000479660 TSPAN4O14817 238 aa11.23□□□□□ -0.61
CLDN18-203ENST00000479660 TRGV3P03979 118 aa11.23□□□□□ -0.61
CLDN18-203ENST00000479660 PPIFP30405 207 aaKnown RBP11.23□□□□□ -0.61
CLDN18-203ENST00000479660 SUMO1P63165 101 aaKnown RBP11.23□□□□□ -0.61
CLDN18-203ENST00000479660 DERL1Q9BUN8 251 aa11.23□□□□□ -0.61
CLDN18-203ENST00000479660 VPREB3Q9UKI3 123 aa11.23□□□□□ -0.61
CLDN18-203ENST00000479660 FASNP49327 2511 aaKnown RBP11.23□□□□□ -0.61
CLDN18-203ENST00000479660 TRBV7-1A0A0A6YYK4 115 aa11.22□□□□□ -0.61
CLDN18-203ENST00000479660 FAM223BA6NKX1 122 aa11.22□□□□□ -0.61
CLDN18-203ENST00000479660 GGTLC3B5MD39 225 aa11.22□□□□□ -0.61
CLDN18-203ENST00000479660 USF2Q15853 346 aaPredicted RBP11.22□□□□□ -0.61
CLDN18-203ENST00000479660 CLEC19AQ6UXS0 136 aa11.22□□□□□ -0.61
CLDN18-203ENST00000479660 FAM223AQ8IWN6 122 aa11.22□□□□□ -0.61
CLDN18-203ENST00000479660 CCDC140Q96MF4 163 aa11.22□□□□□ -0.61
CLDN18-203ENST00000479660 AKAP9Q99996 3911 aa11.21□□□□□ -0.61
CLDN18-203ENST00000479660 B4DEV8 164 aa11.21□□□□□ -0.61
CLDN18-203ENST00000479660 HOXA3O43365 443 aaPredicted RBP11.21□□□□□ -0.61
CLDN18-203ENST00000479660 NBEAP1P0C6P0 100 aa11.21□□□□□ -0.61
CLDN18-203ENST00000479660 BLNKQ8WV28 456 aa11.21□□□□□ -0.61
CLDN18-203ENST00000479660 SHANK2-AS3Q9BTD1 123 aa11.21□□□□□ -0.61
CLDN18-203ENST00000479660 PRDM13Q9H4Q3 707 aa11.21□□□□□ -0.61
CLDN18-203ENST00000479660 IGHV3-35A0A0C4DH35 117 aa11.21□□□□□ -0.62
CLDN18-203ENST00000479660 H3BRN7 92 aa11.21□□□□□ -0.62
CLDN18-203ENST00000479660 GP9P14770 177 aa11.21□□□□□ -0.62
CLDN18-203ENST00000479660 CRYBB3P26998 211 aa11.21□□□□□ -0.62
CLDN18-203ENST00000479660 TPPP2P59282 170 aa11.21□□□□□ -0.62
CLDN18-203ENST00000479660 ADIRFQ15847 76 aa11.21□□□□□ -0.62
CLDN18-203ENST00000479660 ZNF600Q6ZNG1 722 aa11.21□□□□□ -0.62
CLDN18-203ENST00000479660 IL17RELQ6ZVW7 336 aa11.21□□□□□ -0.62
CLDN18-203ENST00000479660 S100A7AQ86SG5 101 aa11.21□□□□□ -0.62
CLDN18-203ENST00000479660 TEX29Q8N6K0 151 aa11.21□□□□□ -0.62
CLDN18-203ENST00000479660 C11orf52Q96A22 123 aa11.21□□□□□ -0.62
CLDN18-203ENST00000479660 GNB4Q9HAV0 340 aa11.21□□□□□ -0.62
CLDN18-203ENST00000479660 TLN2Q9Y4G6 2542 aa11.2□□□□□ -0.62
CLDN18-203ENST00000479660 H3BUA1 57 aa11.2□□□□□ -0.62
CLDN18-203ENST00000479660 BRI3O95415 125 aa11.2□□□□□ -0.62
CLDN18-203ENST00000479660 RANP62826 216 aaKnown RBP11.2□□□□□ -0.62
CLDN18-203ENST00000479660 RPL23P62829 140 aaKnown RBP11.2□□□□□ -0.62
CLDN18-203ENST00000479660 ZNF343Q6P1L6 599 aa11.2□□□□□ -0.62
CLDN18-203ENST00000479660 A0A087WWC5 75 aa11.19□□□□□ -0.62
CLDN18-203ENST00000479660 ZNF98A6NK75 572 aa11.19□□□□□ -0.62
CLDN18-203ENST00000479660 TGOLN2O43493 480 aa11.19□□□□□ -0.62
CLDN18-203ENST00000479660 ISOC2Q96AB3 205 aa11.19□□□□□ -0.62
CLDN18-203ENST00000479660 ELOVL1Q9BW60 279 aa11.19□□□□□ -0.62
CLDN18-203ENST00000479660 TUBA4BQ9H853 241 aa11.19□□□□□ -0.62
CLDN18-203ENST00000479660 TMEM14CQ9P0S9 112 aa11.19□□□□□ -0.62
CLDN18-203ENST00000479660 PRELID1Q9Y255 219 aa11.19□□□□□ -0.62
CLDN18-203ENST00000479660 FLNAP21333 2647 aaKnown RBP11.19□□□□□ -0.62
CLDN18-203ENST00000479660 PF4V1P10720 104 aa11.19□□□□□ -0.62
CLDN18-203ENST00000479660 TMEM95Q3KNT9 176 aa11.19□□□□□ -0.62
CLDN18-203ENST00000479660 BPIFA4PQ86YQ2 179 aa11.19□□□□□ -0.62
CLDN18-203ENST00000479660 ZNF580Q9UK33 172 aa11.19□□□□□ -0.62
CLDN18-203ENST00000479660 MXRA5Q9NR99 2828 aa11.18□□□□□ -0.62
CLDN18-203ENST00000479660 HIST1H1EP10412 219 aaKnown RBP11.18□□□□□ -0.62
CLDN18-203ENST00000479660 RPL35P42766 123 aaKnown RBP11.18□□□□□ -0.62
CLDN18-203ENST00000479660 TOMM20LQ6UXN7 152 aa11.18□□□□□ -0.62
CLDN18-203ENST00000479660 USMG5Q96IX5 58 aa11.18□□□□□ -0.62
CLDN18-203ENST00000479660 ATP6V0BQ99437 205 aa11.18□□□□□ -0.62
CLDN18-203ENST00000479660 KLK15Q9H2R5 256 aa11.18□□□□□ -0.62
CLDN18-203ENST00000479660 RABAC1Q9UI14 185 aa11.18□□□□□ -0.62
CLDN18-203ENST00000479660 HECTD1Q9ULT8 2610 aa11.18□□□□□ -0.62
CLDN18-203ENST00000479660 TRBV20OR9-2A0A075B6H5 130 aa11.18□□□□□ -0.62
CLDN18-203ENST00000479660 IGHV3OR16-8A0A075B7F1 116 aa11.18□□□□□ -0.62
CLDN18-203ENST00000479660 HELTA6NFD8 242 aa11.18□□□□□ -0.62
CLDN18-203ENST00000479660 H3BTX0 84 aa11.18□□□□□ -0.62
CLDN18-203ENST00000479660 BMPR1BO00238 502 aa11.18□□□□□ -0.62
CLDN18-203ENST00000479660 IGLV1-40P01703 118 aa11.18□□□□□ -0.62
CLDN18-203ENST00000479660 SRP14P37108 136 aaKnown RBP11.18□□□□□ -0.62
CLDN18-203ENST00000479660 CFHR3Q02985 330 aa11.18□□□□□ -0.62
CLDN18-203ENST00000479660 ZNF329Q86UD4 541 aa11.18□□□□□ -0.62
CLDN18-203ENST00000479660 SIGLECL1Q8N7X8 197 aa11.18□□□□□ -0.62
CLDN18-203ENST00000479660 PGPEP1LA6NFU8 196 aa11.17□□□□□ -0.62
CLDN18-203ENST00000479660 CD5LO43866 347 aa11.17□□□□□ -0.62
CLDN18-203ENST00000479660 MYCNOSP40205 109 aa11.17□□□□□ -0.62
CLDN18-203ENST00000479660 KRTAP1-1Q07627 177 aa11.17□□□□□ -0.62
CLDN18-203ENST00000479660 RNF212Q495C1 297 aa11.17□□□□□ -0.62
CLDN18-203ENST00000479660 LINC01551Q86U37 167 aa11.17□□□□□ -0.62
CLDN18-203ENST00000479660 C2CD4CQ8TF44 421 aa11.17□□□□□ -0.62
CLDN18-203ENST00000479660 ZNF414Q96IQ9 312 aa11.17□□□□□ -0.62
CLDN18-203ENST00000479660 PRSS22Q9GZN4 317 aa11.17□□□□□ -0.62
CLDN18-203ENST00000479660 AURKAIP1Q9NWT8 199 aaPredicted RBP11.17□□□□□ -0.62
CLDN18-203ENST00000479660 ZNF586Q9NXT0 402 aa11.17□□□□□ -0.62
CLDN18-203ENST00000479660 PGPA6NDG6 321 aa11.16□□□□□ -0.62
CLDN18-203ENST00000479660 COLCA2A8K830 154 aa11.16□□□□□ -0.62
CLDN18-203ENST00000479660 PPP5D1E7EU14 171 aa11.16□□□□□ -0.62
CLDN18-203ENST00000479660 RAB9AP51151 201 aa11.16□□□□□ -0.62
CLDN18-203ENST00000479660 RELQ04864 619 aaPredicted RBP11.16□□□□□ -0.62
CLDN18-203ENST00000479660 C15orf54Q8N8G6 183 aa11.16□□□□□ -0.62
CLDN18-203ENST00000479660 OR4F17Q8NGA8 305 aa11.16□□□□□ -0.62
CLDN18-203ENST00000479660 DUX5Q96PT3 197 aa11.16□□□□□ -0.62
CLDN18-203ENST00000479660 NPFFR1Q9GZQ6 430 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms