RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 TMEM167BQ9NRX6 74 aa4.06□□□□□ -1.76
CCDC39-204ENST00000476379 IDI2-AS1Q9NZ38 188 aa4.06□□□□□ -1.76
CCDC39-204ENST00000476379 IL36BQ9NZH7 164 aa4.06□□□□□ -1.76
CCDC39-204ENST00000476379 COL6A5A8TX70 2615 aa4.05□□□□□ -1.76
CCDC39-204ENST00000476379 TRBV24-1A0A075B6N3 115 aa4.05□□□□□ -1.76
CCDC39-204ENST00000476379 A0A087WWC5 75 aa4.05□□□□□ -1.76
CCDC39-204ENST00000476379 KBTBD11-OT1A0A1B0GTJ5 212 aa4.05□□□□□ -1.76
CCDC39-204ENST00000476379 TEX50A0A1B0GTY4 177 aa4.05□□□□□ -1.76
CCDC39-204ENST00000476379 PMS2P5A8MQ11 134 aa4.05□□□□□ -1.76
CCDC39-204ENST00000476379 F5H697 171 aa4.05□□□□□ -1.76
CCDC39-204ENST00000476379 NDUFS7O75251 213 aa4.05□□□□□ -1.76
CCDC39-204ENST00000476379 GCGP01275 180 aa4.05□□□□□ -1.76
CCDC39-204ENST00000476379 IGLV3-1P01715 115 aa4.05□□□□□ -1.76
CCDC39-204ENST00000476379 GCSHP23434 173 aa4.05□□□□□ -1.76
CCDC39-204ENST00000476379 S100A4P26447 101 aaKnown RBP4.05□□□□□ -1.76
CCDC39-204ENST00000476379 EMP1P54849 157 aa4.05□□□□□ -1.76
CCDC39-204ENST00000476379 FOXL1Q12952 345 aa4.05□□□□□ -1.76
CCDC39-204ENST00000476379 MPV17L2Q567V2 206 aa4.05□□□□□ -1.76
CCDC39-204ENST00000476379 TCTEX1D1Q8N7M0 179 aa4.05□□□□□ -1.76
CCDC39-204ENST00000476379 IFI27L2Q9H2X8 130 aa4.05□□□□□ -1.76
CCDC39-204ENST00000476379 FNDC4Q9H6D8 234 aaPredicted RBP4.05□□□□□ -1.76
CCDC39-204ENST00000476379 BET1LQ9NYM9 111 aa4.05□□□□□ -1.76
CCDC39-204ENST00000476379 CDC42EP3Q9UKI2 254 aa4.05□□□□□ -1.76
CCDC39-204ENST00000476379 PRNDQ9UKY0 176 aa4.05□□□□□ -1.76
CCDC39-204ENST00000476379 ANAPC10Q9UM13 185 aa4.05□□□□□ -1.76
CCDC39-204ENST00000476379 IGKV2-40A0A087WW87 121 aaPredicted RBP4.05□□□□□ -1.76
CCDC39-204ENST00000476379 TRAV8-6A0A0B4J262 113 aa4.05□□□□□ -1.76
CCDC39-204ENST00000476379 NPIPB5A8MRT5 1133 aa4.05□□□□□ -1.76
CCDC39-204ENST00000476379 IQCF6A8MYZ5 107 aa4.05□□□□□ -1.76
CCDC39-204ENST00000476379 NPIPB11E5RHQ5 1161 aa4.05□□□□□ -1.76
CCDC39-204ENST00000476379 PROP1O75360 226 aa4.05□□□□□ -1.76
CCDC39-204ENST00000476379 HYPMO75409 117 aa4.05□□□□□ -1.76
CCDC39-204ENST00000476379 DKK1O94907 266 aa4.05□□□□□ -1.76
CCDC39-204ENST00000476379 IGKV2D-40P01614 121 aaPredicted RBP4.05□□□□□ -1.76
CCDC39-204ENST00000476379 MGPP08493 103 aa4.05□□□□□ -1.76
CCDC39-204ENST00000476379 STAG3L3P0CL85 134 aa4.05□□□□□ -1.76
CCDC39-204ENST00000476379 SRP14P37108 136 aaKnown RBP4.05□□□□□ -1.76
CCDC39-204ENST00000476379 NDPQ00604 133 aa4.05□□□□□ -1.76
CCDC39-204ENST00000476379 VWC2Q2TAL6 325 aa4.05□□□□□ -1.76
CCDC39-204ENST00000476379 C3orf36Q3SXR2 165 aa4.05□□□□□ -1.76
CCDC39-204ENST00000476379 HIST2H2BDQ6DRA6 164 aa4.05□□□□□ -1.76
CCDC39-204ENST00000476379 WDR31Q8NA23 367 aa4.05□□□□□ -1.76
CCDC39-204ENST00000476379 TTTY13Q9BZ97 58 aa4.05□□□□□ -1.76
CCDC39-204ENST00000476379 RNF114Q9Y508 228 aa4.05□□□□□ -1.76
CCDC39-204ENST00000476379 FAM90A10PA6NDY2 464 aa4.05□□□□□ -1.76
CCDC39-204ENST00000476379 FAM90A18PA6NE21 464 aa4.05□□□□□ -1.76
CCDC39-204ENST00000476379 FAM90A16PA6NEW6 464 aa4.05□□□□□ -1.76
CCDC39-204ENST00000476379 FAM90A20PA6NIJ5 464 aa4.05□□□□□ -1.76
CCDC39-204ENST00000476379 FAM90A8PA6NJQ4 464 aa4.05□□□□□ -1.76
CCDC39-204ENST00000476379 FAM90A7PA6NKC0 464 aa4.05□□□□□ -1.76
CCDC39-204ENST00000476379 TMEM210A6NLX4 147 aa4.05□□□□□ -1.76
CCDC39-204ENST00000476379 C15orf61A6NNL5 157 aa4.05□□□□□ -1.76
CCDC39-204ENST00000476379 FAM90A22PA8MWA6 464 aa4.05□□□□□ -1.76
CCDC39-204ENST00000476379 FAM90A12PA8MX19 464 aa4.05□□□□□ -1.76
CCDC39-204ENST00000476379 FAM90A5PA8MXJ8 464 aa4.05□□□□□ -1.76
CCDC39-204ENST00000476379 FAM90A23PA8MXZ1 464 aa4.05□□□□□ -1.76
CCDC39-204ENST00000476379 SMAD7O15105 426 aaKnown RBP4.05□□□□□ -1.76
CCDC39-204ENST00000476379 FAM90A15PP0C7V4 464 aa4.05□□□□□ -1.76
CCDC39-204ENST00000476379 FAM90A13PP0C7W8 464 aa4.05□□□□□ -1.76
CCDC39-204ENST00000476379 FAM90A14PP0C7W9 464 aa4.05□□□□□ -1.76
CCDC39-204ENST00000476379 FAM90A24PP0C7X0 464 aa4.05□□□□□ -1.76
CCDC39-204ENST00000476379 BRWD1-AS2P59051 145 aa4.05□□□□□ -1.76
CCDC39-204ENST00000476379 ZNF146Q15072 292 aa4.05□□□□□ -1.76
CCDC39-204ENST00000476379 COLCA1Q6ZS62 124 aa4.05□□□□□ -1.76
CCDC39-204ENST00000476379 TMEM219Q86XT9 240 aa4.05□□□□□ -1.76
CCDC39-204ENST00000476379 STPG4Q8N801 248 aa4.05□□□□□ -1.76
CCDC39-204ENST00000476379 NUDT10Q8NFP7 164 aa4.05□□□□□ -1.76
CCDC39-204ENST00000476379 OR4F17Q8NGA8 305 aa4.05□□□□□ -1.76
CCDC39-204ENST00000476379 TMEM45BQ96B21 275 aa4.05□□□□□ -1.76
CCDC39-204ENST00000476379 NUDT11Q96G61 164 aa4.05□□□□□ -1.76
CCDC39-204ENST00000476379 MRPL36Q9P0J6 103 aaKnown RBP4.05□□□□□ -1.76
CCDC39-204ENST00000476379 KLF2Q9Y5W3 355 aaPredicted RBP4.05□□□□□ -1.76
CCDC39-204ENST00000476379 PEX7O00628 323 aa4.05□□□□□ -1.76
CCDC39-204ENST00000476379 APOHP02749 345 aaPredicted RBP4.05□□□□□ -1.76
CCDC39-204ENST00000476379 CYC1P08574 325 aa4.05□□□□□ -1.76
CCDC39-204ENST00000476379 STAG3L2P0CL84 134 aa4.05□□□□□ -1.76
CCDC39-204ENST00000476379 CFPP27918 469 aa4.05□□□□□ -1.76
CCDC39-204ENST00000476379 CSN1S1P47710 185 aa4.05□□□□□ -1.76
CCDC39-204ENST00000476379 DEFB1P60022 68 aa4.05□□□□□ -1.76
CCDC39-204ENST00000476379 NUTF2P61970 127 aaKnown RBP4.05□□□□□ -1.76
CCDC39-204ENST00000476379 COL5A1-AS1Q5SY13 56 aa4.05□□□□□ -1.76
CCDC39-204ENST00000476379 LDLRAD2Q5SZI1 272 aa4.05□□□□□ -1.76
CCDC39-204ENST00000476379 CLEC7AQ9BXN2 247 aa4.05□□□□□ -1.76
CCDC39-204ENST00000476379 LINC00470Q9BZP3 86 aa4.05□□□□□ -1.76
CCDC39-204ENST00000476379 NGBQ9NPG2 151 aa4.05□□□□□ -1.76
CCDC39-204ENST00000476379 IGKV1OR2-108A0A075B7D4 117 aa4.04□□□□□ -1.76
CCDC39-204ENST00000476379 ACTL10Q5JWF8 245 aa4.04□□□□□ -1.76
CCDC39-204ENST00000476379 KLHDC1Q8N7A1 406 aa4.04□□□□□ -1.76
CCDC39-204ENST00000476379 MDS2Q8NDY4 140 aa4.04□□□□□ -1.76
CCDC39-204ENST00000476379 THYN1Q9P016 225 aa4.04□□□□□ -1.76
CCDC39-204ENST00000476379 JPT1Q9UK76 154 aa4.04□□□□□ -1.76
CCDC39-204ENST00000476379 LAMTOR2Q9Y2Q5 125 aa4.04□□□□□ -1.76
CCDC39-204ENST00000476379 PPIAL4CA0A0B4J2A2 164 aa4.04□□□□□ -1.76
CCDC39-204ENST00000476379 A0A1B0GW15 77 aa4.04□□□□□ -1.76
CCDC39-204ENST00000476379 GOSR1O95249 250 aa4.04□□□□□ -1.76
CCDC39-204ENST00000476379 TYMSP04818 313 aa4.04□□□□□ -1.76
CCDC39-204ENST00000476379 PPIAL4GP0DN37 164 aa4.04□□□□□ -1.76
CCDC39-204ENST00000476379 CD99P14209 185 aa4.04□□□□□ -1.76
CCDC39-204ENST00000476379 HLA-DMBP28068 263 aa4.04□□□□□ -1.76
CCDC39-204ENST00000476379 GPR183P32249 361 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms