RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-215ENST00000475319 DSCR4P56555 118 aaPredicted RBP4.77□□□□□ -1.65
ECHDC1-215ENST00000475319 CLDN17P56750 224 aa4.77□□□□□ -1.65
ECHDC1-215ENST00000475319 GNB1P62873 340 aa4.77□□□□□ -1.65
ECHDC1-215ENST00000475319 FAM27E3Q08E93 113 aa4.77□□□□□ -1.65
ECHDC1-215ENST00000475319 LGALS9BQ3B8N2 356 aa4.77□□□□□ -1.65
ECHDC1-215ENST00000475319 LGALS9CQ6DKI2 356 aa4.77□□□□□ -1.65
ECHDC1-215ENST00000475319 Q71RC1 249 aaPredicted RBP4.77□□□□□ -1.65
ECHDC1-215ENST00000475319 ATP5L2Q7Z4Y8 100 aa4.77□□□□□ -1.65
ECHDC1-215ENST00000475319 RPS19BP1Q86WX3 136 aaKnown RBP4.77□□□□□ -1.65
ECHDC1-215ENST00000475319 MEX3DQ86XN8 651 aaKnown RBP4.77□□□□□ -1.65
ECHDC1-215ENST00000475319 C15orf53Q8NAA6 179 aa4.77□□□□□ -1.65
ECHDC1-215ENST00000475319 TMEM255BQ8WV15 326 aa4.77□□□□□ -1.65
ECHDC1-215ENST00000475319 MRPL20Q9BYC9 149 aaKnown RBP4.77□□□□□ -1.65
ECHDC1-215ENST00000475319 TTTY10Q9BZA0 68 aa4.77□□□□□ -1.65
ECHDC1-215ENST00000475319 AAMDCQ9H7C9 122 aa4.77□□□□□ -1.65
ECHDC1-215ENST00000475319 RETNQ9HD89 108 aa4.77□□□□□ -1.65
ECHDC1-215ENST00000475319 NHP2Q9NX24 153 aaKnown RBP4.77□□□□□ -1.65
ECHDC1-215ENST00000475319 IL36RNQ9UBH0 155 aa4.77□□□□□ -1.65
ECHDC1-215ENST00000475319 V9GYV3 84 aa4.77□□□□□ -1.65
ECHDC1-215ENST00000475319 TRAV2A0A0B4J234 112 aa4.77□□□□□ -1.65
ECHDC1-215ENST00000475319 TRAV8-4A0A0B4J246 113 aa4.77□□□□□ -1.65
ECHDC1-215ENST00000475319 TCRBV4S1A1TA0A5B7 111 aa4.77□□□□□ -1.65
ECHDC1-215ENST00000475319 RBAKDNA6NC62 111 aa4.77□□□□□ -1.65
ECHDC1-215ENST00000475319 NDUFC2-KCTD14E9PQ53 114 aa4.77□□□□□ -1.65
ECHDC1-215ENST00000475319 C5orf67F2Z3F1 127 aa4.77□□□□□ -1.65
ECHDC1-215ENST00000475319 LINC01619G3V211 115 aa4.77□□□□□ -1.65
ECHDC1-215ENST00000475319 TMEM178BH3BS89 294 aa4.77□□□□□ -1.65
ECHDC1-215ENST00000475319 SSSCA1O60232 199 aa4.77□□□□□ -1.65
ECHDC1-215ENST00000475319 PDCD6O75340 191 aa4.77□□□□□ -1.65
ECHDC1-215ENST00000475319 CST7O76096 145 aa4.77□□□□□ -1.65
ECHDC1-215ENST00000475319 SLC25A14O95258 325 aaPredicted RBP4.77□□□□□ -1.65
ECHDC1-215ENST00000475319 PPYP01298 95 aa4.77□□□□□ -1.65
ECHDC1-215ENST00000475319 MGST1P10620 155 aaKnown RBP4.77□□□□□ -1.65
ECHDC1-215ENST00000475319 COX5AP20674 150 aa4.77□□□□□ -1.65
ECHDC1-215ENST00000475319 FXYD2P54710 66 aa4.77□□□□□ -1.65
ECHDC1-215ENST00000475319 FOXA3P55318 350 aaPredicted RBP4.77□□□□□ -1.65
ECHDC1-215ENST00000475319 C12orf74Q32Q52 190 aa4.77□□□□□ -1.65
ECHDC1-215ENST00000475319 C1orf140Q5VVS0 124 aa4.77□□□□□ -1.65
ECHDC1-215ENST00000475319 AAED1Q7RTV5 226 aa4.77□□□□□ -1.65
ECHDC1-215ENST00000475319 LYZL2Q7Z4W2 148 aa4.77□□□□□ -1.65
ECHDC1-215ENST00000475319 AMN1Q8IY45 258 aa4.77□□□□□ -1.65
ECHDC1-215ENST00000475319 LINC00476Q8WZB0 136 aa4.77□□□□□ -1.65
ECHDC1-215ENST00000475319 BMFQ96LC9 184 aa4.77□□□□□ -1.65
ECHDC1-215ENST00000475319 C18orf15Q96N68 181 aa4.77□□□□□ -1.65
ECHDC1-215ENST00000475319 FAM173AQ9BQD7 235 aa4.77□□□□□ -1.65
ECHDC1-215ENST00000475319 CHCHD5Q9BSY4 110 aa4.77□□□□□ -1.65
ECHDC1-215ENST00000475319 CHAC1Q9BUX1 264 aa4.77□□□□□ -1.65
ECHDC1-215ENST00000475319 GLIPR2Q9H4G4 154 aa4.77□□□□□ -1.65
ECHDC1-215ENST00000475319 VSIRQ9H7M9 311 aa4.77□□□□□ -1.65
ECHDC1-215ENST00000475319 COL6A3P12111 3177 aa4.76□□□□□ -1.65
ECHDC1-215ENST00000475319 MUC6Q6W4X9 2439 aa4.76□□□□□ -1.65
ECHDC1-215ENST00000475319 SCN5AQ14524 2016 aa4.76□□□□□ -1.65
ECHDC1-215ENST00000475319 TRAV13-1A0A0B4J241 112 aa4.76□□□□□ -1.65
ECHDC1-215ENST00000475319 SMIM28A0A1B0GU29 152 aa4.76□□□□□ -1.65
ECHDC1-215ENST00000475319 SMIM27A0A1W2PRY6 76 aa4.76□□□□□ -1.65
ECHDC1-215ENST00000475319 C15orf61A6NNL5 157 aa4.76□□□□□ -1.65
ECHDC1-215ENST00000475319 TMEM14DPA8MWL7 114 aa4.76□□□□□ -1.65
ECHDC1-215ENST00000475319 MGST3O14880 152 aa4.76□□□□□ -1.65
ECHDC1-215ENST00000475319 NDUFB4O95168 129 aa4.76□□□□□ -1.65
ECHDC1-215ENST00000475319 NDUFB2O95178 105 aa4.76□□□□□ -1.65
ECHDC1-215ENST00000475319 GYPBP06028 91 aa4.76□□□□□ -1.65
ECHDC1-215ENST00000475319 ASAH2BP0C7U1 165 aa4.76□□□□□ -1.65
ECHDC1-215ENST00000475319 WT1P19544 449 aaPredicted RBP4.76□□□□□ -1.65
ECHDC1-215ENST00000475319 NPPCP23582 126 aa4.76□□□□□ -1.65
ECHDC1-215ENST00000475319 LEPP41159 167 aa4.76□□□□□ -1.65
ECHDC1-215ENST00000475319 QRFPP83859 136 aa4.76□□□□□ -1.65
ECHDC1-215ENST00000475319 MRPL2Q5T653 305 aaKnown RBP4.76□□□□□ -1.65
ECHDC1-215ENST00000475319 HES3Q5TGS1 186 aa4.76□□□□□ -1.65
ECHDC1-215ENST00000475319 Q6YL49 198 aa4.76□□□□□ -1.65
ECHDC1-215ENST00000475319 Q6ZSR3 168 aa4.76□□□□□ -1.65
ECHDC1-215ENST00000475319 LYPD6Q86Y78 171 aa4.76□□□□□ -1.65
ECHDC1-215ENST00000475319 PIANPQ8IYJ0 282 aa4.76□□□□□ -1.65
ECHDC1-215ENST00000475319 EXOC3-AS1Q8N2X6 119 aa4.76□□□□□ -1.65
ECHDC1-215ENST00000475319 SLC22A24Q8N4F4 322 aa4.76□□□□□ -1.65
ECHDC1-215ENST00000475319 FAM57AQ8TBR7 257 aa4.76□□□□□ -1.65
ECHDC1-215ENST00000475319 TMEM158Q8WZ71 300 aa4.76□□□□□ -1.65
ECHDC1-215ENST00000475319 UBE2E3Q969T4 207 aa4.76□□□□□ -1.65
ECHDC1-215ENST00000475319 C11orf52Q96A22 123 aa4.76□□□□□ -1.65
ECHDC1-215ENST00000475319 LINC01600Q96MT4 127 aa4.76□□□□□ -1.65
ECHDC1-215ENST00000475319 PLA2G2FQ9BZM2 168 aa4.76□□□□□ -1.65
ECHDC1-215ENST00000475319 NINQ8N4C6 2090 aa4.76□□□□□ -1.65
ECHDC1-215ENST00000475319 SCN8AQ9UQD0 1980 aa4.76□□□□□ -1.65
ECHDC1-215ENST00000475319 NCKAP5O14513 1909 aa4.75□□□□□ -1.65
ECHDC1-215ENST00000475319 LMX1BO60663 402 aa4.75□□□□□ -1.65
ECHDC1-215ENST00000475319 ZFAND5O76080 213 aa4.75□□□□□ -1.65
ECHDC1-215ENST00000475319 IL4P05112 153 aa4.75□□□□□ -1.65
ECHDC1-215ENST00000475319 CD7P09564 240 aa4.75□□□□□ -1.65
ECHDC1-215ENST00000475319 P0DMU3 169 aa4.75□□□□□ -1.65
ECHDC1-215ENST00000475319 FAM231AP0DMU4 169 aa4.75□□□□□ -1.65
ECHDC1-215ENST00000475319 FAM231CP0DMU5 169 aa4.75□□□□□ -1.65
ECHDC1-215ENST00000475319 RPL13AP40429 203 aaKnown RBP4.75□□□□□ -1.65
ECHDC1-215ENST00000475319 SSR2P43308 183 aa4.75□□□□□ -1.65
ECHDC1-215ENST00000475319 ARFRP1Q13795 201 aa4.75□□□□□ -1.65
ECHDC1-215ENST00000475319 TRIP6Q15654 476 aaKnown RBP4.75□□□□□ -1.65
ECHDC1-215ENST00000475319 ZNF575Q86XF7 245 aa4.75□□□□□ -1.65
ECHDC1-215ENST00000475319 SFTPA2Q8IWL1 248 aa4.75□□□□□ -1.65
ECHDC1-215ENST00000475319 ODF3L1Q8IXM7 274 aa4.75□□□□□ -1.65
ECHDC1-215ENST00000475319 RPP25LQ8N5L8 163 aaKnown RBP4.75□□□□□ -1.65
ECHDC1-215ENST00000475319 ZNF525Q8N782 197 aa4.75□□□□□ -1.65
ECHDC1-215ENST00000475319 TAF15Q92804 592 aaKnown RBP eCLIP4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms