RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 THAP8Q8NA92 274 aa14.93□□□□□ -0.02
ECHDC1-214ENST00000474289 PRSS3P2Q8NHM4 247 aa14.93□□□□□ -0.02
ECHDC1-214ENST00000474289 PERPQ96FX8 193 aa14.93□□□□□ -0.02
ECHDC1-214ENST00000474289 SPRY4Q9C004 299 aa14.93□□□□□ -0.02
ECHDC1-214ENST00000474289 ARMS2P0C7Q2 107 aa14.92□□□□□ -0.02
ECHDC1-214ENST00000474289 MEF2CQ06413 473 aaPredicted RBP14.92□□□□□ -0.02
ECHDC1-214ENST00000474289 LPAL2Q16609 132 aa14.92□□□□□ -0.02
ECHDC1-214ENST00000474289 OR5AN1Q8NGI8 311 aa14.92□□□□□ -0.02
ECHDC1-214ENST00000474289 OR9G4Q8NGQ1 327 aa14.92□□□□□ -0.02
ECHDC1-214ENST00000474289 RAB9BQ9NP90 201 aa14.92□□□□□ -0.02
ECHDC1-214ENST00000474289 A0A1B0GUT8 65 aa14.92□□□□□ -0.02
ECHDC1-214ENST00000474289 LOXL1Q08397 574 aaPredicted RBP14.92□□□□□ -0.02
ECHDC1-214ENST00000474289 Q6ZT83 130 aa14.92□□□□□ -0.02
ECHDC1-214ENST00000474289 HARBI1Q96MB7 349 aa14.92□□□□□ -0.02
ECHDC1-214ENST00000474289 Q9H3A6 140 aa14.92□□□□□ -0.02
ECHDC1-214ENST00000474289 PLXNB1O43157 2135 aa14.91□□□□□ -0.02
ECHDC1-214ENST00000474289 A0A1W2PNU3 283 aaPredicted RBP14.91□□□□□ -0.02
ECHDC1-214ENST00000474289 HOXC12P31275 282 aa14.91□□□□□ -0.02
ECHDC1-214ENST00000474289 MZT1Q08AG7 82 aa14.91□□□□□ -0.02
ECHDC1-214ENST00000474289 MBNL2Q5VZF2 373 aaKnown RBP14.91□□□□□ -0.02
ECHDC1-214ENST00000474289 Q86TA4 180 aa14.91□□□□□ -0.02
ECHDC1-214ENST00000474289 FAM222BQ8WU58 562 aa14.91□□□□□ -0.02
ECHDC1-214ENST00000474289 GUCD1Q96NT3 240 aa14.91□□□□□ -0.02
ECHDC1-214ENST00000474289 CADP27708 2225 aa14.91□□□□□ -0.02
ECHDC1-214ENST00000474289 CEACAM3P40198 252 aa14.91□□□□□ -0.02
ECHDC1-214ENST00000474289 C10orf55Q5SWW7 151 aa14.91□□□□□ -0.02
ECHDC1-214ENST00000474289 MOGAT3Q86VF5 341 aa14.91□□□□□ -0.02
ECHDC1-214ENST00000474289 INSIG2Q9Y5U4 225 aa14.91□□□□□ -0.02
ECHDC1-214ENST00000474289 TRGV5A0A0B4J1U4 118 aa14.9□□□□□ -0.02
ECHDC1-214ENST00000474289 TEX48A0A1B0GUV7 120 aa14.9□□□□□ -0.02
ECHDC1-214ENST00000474289 CFHR2P36980 270 aa14.9□□□□□ -0.02
ECHDC1-214ENST00000474289 IFI27P40305 119 aaPredicted RBP14.9□□□□□ -0.02
ECHDC1-214ENST00000474289 RUSC1-AS1Q66K80 236 aa14.9□□□□□ -0.02
ECHDC1-214ENST00000474289 SLC25A48Q6ZT89 311 aaKnown RBP14.9□□□□□ -0.02
ECHDC1-214ENST00000474289 ABHD17AQ96GS6 310 aa14.9□□□□□ -0.02
ECHDC1-214ENST00000474289 SPENQ96T58 3664 aaKnown RBP14.9□□□□□ -0.02
ECHDC1-214ENST00000474289 SVILO95425 2214 aa14.9□□□□□ -0.02
ECHDC1-214ENST00000474289 CGB1A6NKQ9 187 aa14.9□□□□□ -0.02
ECHDC1-214ENST00000474289 GP9P14770 177 aa14.9□□□□□ -0.02
ECHDC1-214ENST00000474289 RPL24P83731 157 aaKnown RBP14.9□□□□□ -0.02
ECHDC1-214ENST00000474289 LGALS9BQ3B8N2 356 aa14.9□□□□□ -0.02
ECHDC1-214ENST00000474289 LGALS9CQ6DKI2 356 aa14.9□□□□□ -0.02
ECHDC1-214ENST00000474289 PRSS57Q6UWY2 283 aa14.9□□□□□ -0.02
ECHDC1-214ENST00000474289 RPRMLQ8N4K4 120 aa14.9□□□□□ -0.02
ECHDC1-214ENST00000474289 ZADH2Q8N4Q0 377 aa14.9□□□□□ -0.02
ECHDC1-214ENST00000474289 OR4X2Q8NGF9 303 aa14.9□□□□□ -0.02
ECHDC1-214ENST00000474289 C22orf46C9J442 243 aa14.89□□□□□ -0.03
ECHDC1-214ENST00000474289 INS-IGF2F8WCM5 200 aa14.89□□□□□ -0.03
ECHDC1-214ENST00000474289 KLRC4-KLRK1H3BQV0 150 aa14.89□□□□□ -0.03
ECHDC1-214ENST00000474289 SIVA1O15304 175 aa14.89□□□□□ -0.03
ECHDC1-214ENST00000474289 FABP2P12104 132 aa14.89□□□□□ -0.03
ECHDC1-214ENST00000474289 AZU1P20160 251 aa14.89□□□□□ -0.03
ECHDC1-214ENST00000474289 CACNG7P62955 275 aa14.89□□□□□ -0.03
ECHDC1-214ENST00000474289 MSMPQ1L6U9 139 aa14.89□□□□□ -0.03
ECHDC1-214ENST00000474289 PEAR1Q5VY43 1037 aaPredicted RBP14.89□□□□□ -0.03
ECHDC1-214ENST00000474289 C16orf54Q6UWD8 224 aa14.89□□□□□ -0.03
ECHDC1-214ENST00000474289 ZCCHC24Q8N2G6 241 aaKnown RBP14.89□□□□□ -0.03
ECHDC1-214ENST00000474289 MDS2Q8NDY4 140 aa14.89□□□□□ -0.03
ECHDC1-214ENST00000474289 LOC400499M0QZD8 3231 aa14.89□□□□□ -0.03
ECHDC1-214ENST00000474289 PPIAL4CA0A0B4J2A2 164 aa14.88□□□□□ -0.03
ECHDC1-214ENST00000474289 PCP2Q8IVA1 136 aa14.88□□□□□ -0.03
ECHDC1-214ENST00000474289 SVIPQ8NHG7 77 aa14.88□□□□□ -0.03
ECHDC1-214ENST00000474289 OSR1Q8TAX0 266 aaPredicted RBP14.88□□□□□ -0.03
ECHDC1-214ENST00000474289 GTSF1LQ9H1H1 148 aa14.88□□□□□ -0.03
ECHDC1-214ENST00000474289 hADV38S2A0JD32 116 aa14.88□□□□□ -0.03
ECHDC1-214ENST00000474289 M0R296 226 aa14.88□□□□□ -0.03
ECHDC1-214ENST00000474289 NDUFS8O00217 210 aa14.88□□□□□ -0.03
ECHDC1-214ENST00000474289 FLYWCH2Q96CP2 140 aaKnown RBP14.88□□□□□ -0.03
ECHDC1-214ENST00000474289 MRPL20Q9BYC9 149 aaKnown RBP14.88□□□□□ -0.03
ECHDC1-214ENST00000474289 ICE1Q9Y2F5 2266 aa14.88□□□□□ -0.03
ECHDC1-214ENST00000474289 PRNTQ86SH4 94 aa14.87□□□□□ -0.03
ECHDC1-214ENST00000474289 CNEP1R1Q8N9A8 125 aa14.87□□□□□ -0.03
ECHDC1-214ENST00000474289 SRSF12Q8WXF0 261 aaKnown RBP14.87□□□□□ -0.03
ECHDC1-214ENST00000474289 ASPMQ8IZT6 3477 aa14.87□□□□□ -0.03
ECHDC1-214ENST00000474289 ZNF785A8K8V0 405 aa14.87□□□□□ -0.03
ECHDC1-214ENST00000474289 LHBP01229 141 aa14.87□□□□□ -0.03
ECHDC1-214ENST00000474289 IGLV2-11P01706 119 aa14.87□□□□□ -0.03
ECHDC1-214ENST00000474289 RIGQ13278 110 aa14.87□□□□□ -0.03
ECHDC1-214ENST00000474289 TM4SF20Q53R12 229 aa14.87□□□□□ -0.03
ECHDC1-214ENST00000474289 SAMD5Q5TGI4 173 aa14.87□□□□□ -0.03
ECHDC1-214ENST00000474289 SSUH2Q9Y2M2 353 aa14.87□□□□□ -0.03
ECHDC1-214ENST00000474289 LOC389332A0A1B0GUA5 103 aa14.86□□□□□ -0.03
ECHDC1-214ENST00000474289 NMUP48645 174 aa14.86□□□□□ -0.03
ECHDC1-214ENST00000474289 GATD1Q8NB37 220 aa14.86□□□□□ -0.03
ECHDC1-214ENST00000474289 RPUSD1Q9UJJ7 312 aaKnown RBP14.86□□□□□ -0.03
ECHDC1-214ENST00000474289 ABCA1O95477 2261 aa14.86□□□□□ -0.03
ECHDC1-214ENST00000474289 SMAGPQ0VAQ4 97 aa14.86□□□□□ -0.03
ECHDC1-214ENST00000474289 COL25A1Q9BXS0 654 aaPredicted RBP14.86□□□□□ -0.03
ECHDC1-214ENST00000474289 F11RQ9Y624 299 aaKnown RBP14.86□□□□□ -0.03
ECHDC1-214ENST00000474289 PPIAL4EA0A075B759 164 aa14.85□□□□□ -0.03
ECHDC1-214ENST00000474289 IGHV1-18A0A0C4DH31 117 aa14.85□□□□□ -0.03
ECHDC1-214ENST00000474289 PPIAL4FP0DN26 164 aa14.85□□□□□ -0.03
ECHDC1-214ENST00000474289 SCGB1A1P11684 91 aa14.85□□□□□ -0.03
ECHDC1-214ENST00000474289 SUB1P53999 127 aaKnown RBP eCLIP14.85□□□□□ -0.03
ECHDC1-214ENST00000474289 ATP1A1-AS1Q5TC04 95 aa14.85□□□□□ -0.03
ECHDC1-214ENST00000474289 GOLT1AQ6ZVE7 132 aa14.85□□□□□ -0.03
ECHDC1-214ENST00000474289 CLUHP3Q96NS8 147 aa14.85□□□□□ -0.03
ECHDC1-214ENST00000474289 SIGLEC8Q9NYZ4 499 aa14.85□□□□□ -0.03
ECHDC1-214ENST00000474289 FCGR2BP31994 310 aaPredicted RBP14.85□□□□□ -0.03
ECHDC1-214ENST00000474289 FXYD7P58549 80 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms