RNA–Protein interactions for RNA: ENST00000473711.1

SP140-208, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 644 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-208ENST00000473711 FUT9Q9Y231 359 aa8.31□□□□□ -1.08
SP140-208ENST00000473711 PRELID1Q9Y255 219 aa8.31□□□□□ -1.08
SP140-208ENST00000473711 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.3□□□□□ -1.08
SP140-208ENST00000473711 WI2-2373I1.2A0A1W2PRP0 233 aa8.3□□□□□ -1.08
SP140-208ENST00000473711 NUDT19A8MXV4 375 aa8.3□□□□□ -1.08
SP140-208ENST00000473711 TCF21O43680 179 aa8.3□□□□□ -1.08
SP140-208ENST00000473711 SCO1O75880 301 aa8.3□□□□□ -1.08
SP140-208ENST00000473711 TRBV12-3P01733 135 aa8.3□□□□□ -1.08
SP140-208ENST00000473711 IL4P05112 153 aa8.3□□□□□ -1.08
SP140-208ENST00000473711 ARL3P36405 182 aa8.3□□□□□ -1.08
SP140-208ENST00000473711 RPL15P61313 204 aaKnown RBP8.3□□□□□ -1.08
SP140-208ENST00000473711 SRSF3P84103 164 aaKnown RBP8.3□□□□□ -1.08
SP140-208ENST00000473711 SRSF2Q01130 221 aaKnown RBP8.3□□□□□ -1.08
SP140-208ENST00000473711 ZNF343Q6P1L6 599 aa8.3□□□□□ -1.08
SP140-208ENST00000473711 SHISA2Q6UWI4 295 aa8.3□□□□□ -1.08
SP140-208ENST00000473711 ZNF600Q6ZNG1 722 aa8.3□□□□□ -1.08
SP140-208ENST00000473711 LINC00305Q7Z4B0 112 aa8.3□□□□□ -1.08
SP140-208ENST00000473711 IQCF2Q8IXL9 164 aa8.3□□□□□ -1.08
SP140-208ENST00000473711 COMMD1Q8N668 190 aa8.3□□□□□ -1.08
SP140-208ENST00000473711 KLHDC1Q8N7A1 406 aa8.3□□□□□ -1.08
SP140-208ENST00000473711 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.3□□□□□ -1.08
SP140-208ENST00000473711 OR5AU1Q8NGC0 362 aa8.3□□□□□ -1.08
SP140-208ENST00000473711 RNF2Q99496 336 aa8.3□□□□□ -1.08
SP140-208ENST00000473711 C16orf95Q9H693 158 aa8.3□□□□□ -1.08
SP140-208ENST00000473711 TECRQ9NZ01 308 aaKnown RBP8.3□□□□□ -1.08
SP140-208ENST00000473711 HIGD1AQ9Y241 93 aa8.3□□□□□ -1.08
SP140-208ENST00000473711 PUS1Q9Y606 427 aaKnown RBP eCLIP8.3□□□□□ -1.08
SP140-208ENST00000473711 IGHV3OR16-8A0A075B7F1 116 aa8.29□□□□□ -1.08
SP140-208ENST00000473711 RAB19A4D1S5 217 aa8.29□□□□□ -1.08
SP140-208ENST00000473711 OR2C1O95371 312 aa8.29□□□□□ -1.08
SP140-208ENST00000473711 CXorf1O96002 111 aa8.29□□□□□ -1.08
SP140-208ENST00000473711 STAG3L2P0CL84 134 aa8.29□□□□□ -1.08
SP140-208ENST00000473711 STAG3L3P0CL85 134 aa8.29□□□□□ -1.08
SP140-208ENST00000473711 ARL14EPLP0DKL9 152 aa8.29□□□□□ -1.08
SP140-208ENST00000473711 C8orf88P0DMB2 117 aa8.29□□□□□ -1.08
SP140-208ENST00000473711 GUK1Q16774 197 aa8.29□□□□□ -1.08
SP140-208ENST00000473711 HAGHQ16775 308 aa8.29□□□□□ -1.08
SP140-208ENST00000473711 MORN5Q5VZ52 161 aa8.29□□□□□ -1.08
SP140-208ENST00000473711 TOMM20LQ6UXN7 152 aa8.29□□□□□ -1.08
SP140-208ENST00000473711 EIF4E3Q8N5X7 224 aaKnown RBP8.29□□□□□ -1.08
SP140-208ENST00000473711 RNF125Q96EQ8 232 aa8.29□□□□□ -1.08
SP140-208ENST00000473711 ZNF414Q96IQ9 312 aa8.29□□□□□ -1.08
SP140-208ENST00000473711 ATP6V0BQ99437 205 aa8.29□□□□□ -1.08
SP140-208ENST00000473711 MRPL32Q9BYC8 188 aaKnown RBP8.29□□□□□ -1.08
SP140-208ENST00000473711 TMEM231Q9H6L2 316 aa8.29□□□□□ -1.08
SP140-208ENST00000473711 MRPL27Q9P0M9 148 aaKnown RBP8.29□□□□□ -1.08
SP140-208ENST00000473711 GNG13Q9P2W3 67 aa8.29□□□□□ -1.08
SP140-208ENST00000473711 SONP18583 2426 aaKnown RBP8.29□□□□□ -1.08
SP140-208ENST00000473711 HIVEP2P31629 2446 aa8.28□□□□□ -1.08
SP140-208ENST00000473711 RBFOX3A6NFN3 312 aa8.28□□□□□ -1.08
SP140-208ENST00000473711 ATF4P18848 351 aaPredicted RBP8.28□□□□□ -1.08
SP140-208ENST00000473711 TAS2R45P59539 299 aa8.28□□□□□ -1.08
SP140-208ENST00000473711 RELQ04864 619 aaPredicted RBP8.28□□□□□ -1.08
SP140-208ENST00000473711 USF2Q15853 346 aaPredicted RBP8.28□□□□□ -1.08
SP140-208ENST00000473711 RNF152Q8N8N0 203 aa8.28□□□□□ -1.08
SP140-208ENST00000473711 LINC01006Q8NI28 216 aa8.28□□□□□ -1.08
SP140-208ENST00000473711 FAM167A-AS1Q96KT0 104 aa8.28□□□□□ -1.08
SP140-208ENST00000473711 RARRES2Q99969 163 aa8.28□□□□□ -1.08
SP140-208ENST00000473711 SCRT1Q9BWW7 348 aa8.28□□□□□ -1.08
SP140-208ENST00000473711 SLC25A2Q9BXI2 301 aa8.28□□□□□ -1.08
SP140-208ENST00000473711 SLC25A39Q9BZJ4 359 aaPredicted RBP8.28□□□□□ -1.08
SP140-208ENST00000473711 EIF5A2Q9GZV4 153 aaKnown RBP8.28□□□□□ -1.08
SP140-208ENST00000473711 TREM1Q9NP99 234 aa8.28□□□□□ -1.08
SP140-208ENST00000473711 PEF1Q9UBV8 284 aaKnown RBP8.28□□□□□ -1.08
SP140-208ENST00000473711 TLN2Q9Y4G6 2542 aa8.28□□□□□ -1.08
SP140-208ENST00000473711 TSPAN4O14817 238 aa8.27□□□□□ -1.09
SP140-208ENST00000473711 OR7C2O60412 319 aa8.27□□□□□ -1.09
SP140-208ENST00000473711 NDUFA7O95182 113 aa8.27□□□□□ -1.09
SP140-208ENST00000473711 GCHFRP30047 84 aa8.27□□□□□ -1.09
SP140-208ENST00000473711 KHDC3LQ587J8 217 aa8.27□□□□□ -1.09
SP140-208ENST00000473711 TCTEX1D4Q5JR98 221 aa8.27□□□□□ -1.09
SP140-208ENST00000473711 LEMD1Q68G75 181 aa8.27□□□□□ -1.09
SP140-208ENST00000473711 HIST2H2BDQ6DRA6 164 aa8.27□□□□□ -1.09
SP140-208ENST00000473711 MYOZ3Q8TDC0 251 aa8.27□□□□□ -1.09
SP140-208ENST00000473711 ZNF503Q96F45 646 aa8.27□□□□□ -1.09
SP140-208ENST00000473711 UBE2E2Q96LR5 201 aa8.27□□□□□ -1.09
SP140-208ENST00000473711 LINC00052Q96N35 136 aa8.27□□□□□ -1.09
SP140-208ENST00000473711 NIPBLQ6KC79 2804 aaeCLIP8.26□□□□□ -1.09
SP140-208ENST00000473711 LOC102723971A0A1B0GUV8 181 aa8.26□□□□□ -1.09
SP140-208ENST00000473711 SCO2A0A1W2PP80 73 aa8.26□□□□□ -1.09
SP140-208ENST00000473711 H3BRN7 92 aa8.26□□□□□ -1.09
SP140-208ENST00000473711 BMPR1BO00238 502 aa8.26□□□□□ -1.09
SP140-208ENST00000473711 ZNF207O43670 478 aaKnown RBP8.26□□□□□ -1.09
SP140-208ENST00000473711 GGCTO75223 188 aaKnown RBP8.26□□□□□ -1.09
SP140-208ENST00000473711 IFNA1P01562 189 aa8.26□□□□□ -1.09
SP140-208ENST00000473711 OR10J4P0C629 311 aa8.26□□□□□ -1.09
SP140-208ENST00000473711 PSMB3P49720 205 aa8.26□□□□□ -1.09
SP140-208ENST00000473711 UBE2G2P60604 165 aa8.26□□□□□ -1.09
SP140-208ENST00000473711 PEA15Q15121 130 aa8.26□□□□□ -1.09
SP140-208ENST00000473711 UQCC3Q6UW78 93 aa8.26□□□□□ -1.09
SP140-208ENST00000473711 PQLC2Q6ZP29 291 aa8.26□□□□□ -1.09
SP140-208ENST00000473711 C18orf65Q6ZTR6 163 aa8.26□□□□□ -1.09
SP140-208ENST00000473711 RXFP4Q8TDU9 374 aa8.26□□□□□ -1.09
SP140-208ENST00000473711 SHANK2-AS3Q9BTD1 123 aa8.26□□□□□ -1.09
SP140-208ENST00000473711 PAXXQ9BUH6 204 aa8.26□□□□□ -1.09
SP140-208ENST00000473711 C20orf24Q9BUV8 137 aa8.26□□□□□ -1.09
SP140-208ENST00000473711 OR51M1Q9H341 326 aa8.26□□□□□ -1.09
SP140-208ENST00000473711 RABAC1Q9UI14 185 aa8.26□□□□□ -1.09
SP140-208ENST00000473711 ZNF98A6NK75 572 aa8.25□□□□□ -1.09
SP140-208ENST00000473711 C9JQL5 133 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms