RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 MYL6P60660 151 aa0.54□□□□□ -2.32
CLK1-209ENST00000472679 PDZD9Q8IXQ8 264 aa0.54□□□□□ -2.32
CLK1-209ENST00000472679 GPER1Q99527 375 aa0.54□□□□□ -2.32
CLK1-209ENST00000472679 TMEM126AQ9H061 195 aa0.54□□□□□ -2.32
CLK1-209ENST00000472679 C10orf95Q9H7T3 257 aa0.54□□□□□ -2.32
CLK1-209ENST00000472679 UNC13CQ8NB66 2214 aa0.53□□□□□ -2.32
CLK1-209ENST00000472679 NUPR1O60356 82 aa0.53□□□□□ -2.32
CLK1-209ENST00000472679 PIGPP57054 158 aa0.53□□□□□ -2.32
CLK1-209ENST00000472679 PPP1R14BQ96C90 147 aa0.53□□□□□ -2.32
CLK1-209ENST00000472679 LINC00052Q96N35 136 aa0.53□□□□□ -2.32
CLK1-209ENST00000472679 CHD8Q9HCK8 2581 aa0.52□□□□□ -2.33
CLK1-209ENST00000472679 PLXNA4Q9HCM2 1894 aa0.52□□□□□ -2.33
CLK1-209ENST00000472679 OR2T8A6NH00 312 aa0.52□□□□□ -2.33
CLK1-209ENST00000472679 ROMO1P60602 79 aa0.52□□□□□ -2.33
CLK1-209ENST00000472679 KRR1Q13601 381 aaKnown RBP0.52□□□□□ -2.33
CLK1-209ENST00000472679 LYRM7Q5U5X0 104 aa0.52□□□□□ -2.33
CLK1-209ENST00000472679 ORMDL1Q9P0S3 153 aa0.52□□□□□ -2.33
CLK1-209ENST00000472679 KIAA1109Q2LD37 5005 aa0.52□□□□□ -2.33
CLK1-209ENST00000472679 TRAV4A0A0B4J268 109 aa0.51□□□□□ -2.33
CLK1-209ENST00000472679 B4DSR2 109 aa0.51□□□□□ -2.33
CLK1-209ENST00000472679 CD2P06729 351 aa0.51□□□□□ -2.33
CLK1-209ENST00000472679 HOXA6P31267 233 aa0.51□□□□□ -2.33
CLK1-209ENST00000472679 CDKN2CP42773 168 aa0.51□□□□□ -2.33
CLK1-209ENST00000472679 TNS3Q68CZ2 1445 aa0.51□□□□□ -2.33
CLK1-209ENST00000472679 PLPP5Q8NEB5 264 aa0.51□□□□□ -2.33
CLK1-209ENST00000472679 SIGMAR1Q99720 223 aa0.51□□□□□ -2.33
CLK1-209ENST00000472679 TEP1Q99973 2627 aaKnown RBP0.51□□□□□ -2.33
CLK1-209ENST00000472679 MUC2Q02817 5179 aa0.51□□□□□ -2.33
CLK1-209ENST00000472679 KIF1BO60333 1816 aa0.5□□□□□ -2.33
CLK1-209ENST00000472679 PHRF1Q9P1Y6 1649 aaKnown RBP0.5□□□□□ -2.33
CLK1-209ENST00000472679 NDUFB3O43676 98 aa0.5□□□□□ -2.33
CLK1-209ENST00000472679 ERP29P30040 261 aaKnown RBP0.5□□□□□ -2.33
CLK1-209ENST00000472679 RRN3P1Q2M238 152 aa0.5□□□□□ -2.33
CLK1-209ENST00000472679 RGS21Q2M5E4 152 aa0.5□□□□□ -2.33
CLK1-209ENST00000472679 KRTAP26-1Q6PEX3 210 aa0.5□□□□□ -2.33
CLK1-209ENST00000472679 ZNF833PQ6ZTB9 187 aa0.5□□□□□ -2.33
CLK1-209ENST00000472679 OR10K1Q8NGX5 313 aa0.5□□□□□ -2.33
CLK1-209ENST00000472679 PRAP1Q96NZ9 151 aa0.5□□□□□ -2.33
CLK1-209ENST00000472679 TP53RKQ96S44 253 aa0.5□□□□□ -2.33
CLK1-209ENST00000472679 PSTPIP2Q9H939 334 aa0.5□□□□□ -2.33
CLK1-209ENST00000472679 PCTPQ9UKL6 214 aa0.5□□□□□ -2.33
CLK1-209ENST00000472679 ARHGEF11O15085 1522 aa0.49□□□□□ -2.33
CLK1-209ENST00000472679 CITO14578 2027 aa0.49□□□□□ -2.33
CLK1-209ENST00000472679 TMEM114B3SHH9 223 aa0.49□□□□□ -2.33
CLK1-209ENST00000472679 ATP5G3P48201 142 aa0.49□□□□□ -2.33
CLK1-209ENST00000472679 C22orf39Q6P5X5 142 aa0.49□□□□□ -2.33
CLK1-209ENST00000472679 LINC00467Q9BRT7 94 aa0.49□□□□□ -2.33
CLK1-209ENST00000472679 MYO18AQ92614 2054 aaKnown RBP0.49□□□□□ -2.33
CLK1-209ENST00000472679 NEBP20929 6669 aa0.48□□□□□ -2.33
CLK1-209ENST00000472679 FMN1Q68DA7 1419 aa0.48□□□□□ -2.33
CLK1-209ENST00000472679 NAV3Q8IVL0 2385 aa0.48□□□□□ -2.33
CLK1-209ENST00000472679 USP9XQ93008 2570 aaPredicted RBP0.48□□□□□ -2.33
CLK1-209ENST00000472679 TRGV10A0A0A0MS01 117 aa0.48□□□□□ -2.33
CLK1-209ENST00000472679 TRAV10A0A0B4J240 114 aa0.48□□□□□ -2.33
CLK1-209ENST00000472679 OR7C1O76099 320 aaPredicted RBP0.48□□□□□ -2.33
CLK1-209ENST00000472679 CCL7P80098 99 aa0.48□□□□□ -2.33
CLK1-209ENST00000472679 C2orf82Q6UX34 121 aa0.48□□□□□ -2.33
CLK1-209ENST00000472679 SLC25A21Q9BQT8 299 aaPredicted RBP0.48□□□□□ -2.33
CLK1-209ENST00000472679 PARVBQ9HBI1 364 aa0.48□□□□□ -2.33
CLK1-209ENST00000472679 SLC22A13Q9Y226 551 aa0.48□□□□□ -2.33
CLK1-209ENST00000472679 SYNE2Q8WXH0 6885 aaKnown RBP0.48□□□□□ -2.33
CLK1-209ENST00000472679 SETXQ7Z333 2677 aaKnown RBP0.48□□□□□ -2.33
CLK1-209ENST00000472679 COL6A5A8TX70 2615 aa0.48□□□□□ -2.33
CLK1-209ENST00000472679 PTPN13Q12923 2485 aa0.47□□□□□ -2.33
CLK1-209ENST00000472679 MAST4O15021 2626 aa0.47□□□□□ -2.33
CLK1-209ENST00000472679 A8MWV9 139 aa0.47□□□□□ -2.33
CLK1-209ENST00000472679 PRH1P02810 166 aa0.47□□□□□ -2.33
CLK1-209ENST00000472679 C4orf22Q6V702 233 aa0.47□□□□□ -2.33
CLK1-209ENST00000472679 GRINAQ7Z429 371 aa0.47□□□□□ -2.33
CLK1-209ENST00000472679 OR11H6Q8NGC7 330 aa0.47□□□□□ -2.33
CLK1-209ENST00000472679 OR5D14Q8NGL3 314 aa0.47□□□□□ -2.33
CLK1-209ENST00000472679 GNPDA2Q8TDQ7 276 aa0.47□□□□□ -2.33
CLK1-209ENST00000472679 KIFC1Q9BW19 673 aa0.47□□□□□ -2.33
CLK1-209ENST00000472679 TNFSF18Q9UNG2 199 aa0.47□□□□□ -2.33
CLK1-209ENST00000472679 NCOR2Q9Y618 2525 aa0.47□□□□□ -2.33
CLK1-209ENST00000472679 FRAS1Q86XX4 4008 aa0.47□□□□□ -2.33
CLK1-209ENST00000472679 DSTQ03001 7570 aaKnown RBP0.47□□□□□ -2.33
CLK1-209ENST00000472679 ABCA2Q9BZC7 2435 aa0.46□□□□□ -2.34
CLK1-209ENST00000472679 MUC5ACP98088 5654 aa0.46□□□□□ -2.34
CLK1-209ENST00000472679 SETD2Q9BYW2 2564 aaPredicted RBP0.46□□□□□ -2.34
CLK1-209ENST00000472679 TRBV19A0A075B6N1 114 aa0.46□□□□□ -2.34
CLK1-209ENST00000472679 HAGHLQ6PII5 290 aaPredicted RBP0.46□□□□□ -2.34
CLK1-209ENST00000472679 Q8TAT8 98 aa0.46□□□□□ -2.34
CLK1-209ENST00000472679 CHD3Q12873 2000 aaKnown RBP0.46□□□□□ -2.34
CLK1-209ENST00000472679 SRCAPQ6ZRS2 3230 aa0.46□□□□□ -2.34
CLK1-209ENST00000472679 CECR2Q9BXF3 1484 aa0.46□□□□□ -2.34
CLK1-209ENST00000472679 ANKRD17O75179 2603 aaKnown RBP0.46□□□□□ -2.34
CLK1-209ENST00000472679 KDM6AO15550 1401 aaPredicted RBP0.46□□□□□ -2.34
CLK1-209ENST00000472679 VWFP04275 2813 aa0.46□□□□□ -2.34
CLK1-209ENST00000472679 FAM159BA6NKW6 160 aa0.45□□□□□ -2.34
CLK1-209ENST00000472679 E7EUB6 86 aa0.45□□□□□ -2.34
CLK1-209ENST00000472679 DSCR4P56555 118 aaPredicted RBP0.45□□□□□ -2.34
CLK1-209ENST00000472679 YPEL2Q96QA6 119 aa0.45□□□□□ -2.34
CLK1-209ENST00000472679 LY96Q9Y6Y9 160 aa0.45□□□□□ -2.34
CLK1-209ENST00000472679 CHD6Q8TD26 2715 aa0.45□□□□□ -2.34
CLK1-209ENST00000472679 BPTFQ12830 3046 aa0.45□□□□□ -2.34
CLK1-209ENST00000472679 JMJD1CQ15652 2540 aa0.44□□□□□ -2.34
CLK1-209ENST00000472679 TET1Q8NFU7 2136 aa0.44□□□□□ -2.34
CLK1-209ENST00000472679 M0R378 163 aa0.44□□□□□ -2.34
CLK1-209ENST00000472679 TAX1BP3O14907 124 aa0.44□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms