RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 KPNA4O00629 521 aaPredicted RBP1.44□□□□□ -2.18
BRCA2-202ENST00000470094 FAM107AO95990 144 aa1.44□□□□□ -2.18
BRCA2-202ENST00000470094 HTR1AP08908 422 aa1.44□□□□□ -2.18
BRCA2-202ENST00000470094 S100PP25815 95 aa1.44□□□□□ -2.18
BRCA2-202ENST00000470094 S100GP29377 79 aa1.44□□□□□ -2.18
BRCA2-202ENST00000470094 SRP9P49458 86 aaKnown RBP1.44□□□□□ -2.18
BRCA2-202ENST00000470094 SMCO1Q147U7 214 aa1.44□□□□□ -2.18
BRCA2-202ENST00000470094 SURF2Q15527 256 aaPredicted RBP1.44□□□□□ -2.18
BRCA2-202ENST00000470094 WHAMMP3Q1A5X7 153 aa1.44□□□□□ -2.18
BRCA2-202ENST00000470094 BCL2L15Q5TBC7 163 aa1.44□□□□□ -2.18
BRCA2-202ENST00000470094 C22orf39Q6P5X5 142 aa1.44□□□□□ -2.18
BRCA2-202ENST00000470094 DHFR2Q86XF0 187 aa1.44□□□□□ -2.18
BRCA2-202ENST00000470094 OR8B3Q8NGG8 313 aa1.44□□□□□ -2.18
BRCA2-202ENST00000470094 OR8D4Q8NGM9 314 aa1.44□□□□□ -2.18
BRCA2-202ENST00000470094 OR9Q1Q8NGQ5 310 aa1.44□□□□□ -2.18
BRCA2-202ENST00000470094 THEM6Q8WUY1 208 aa1.44□□□□□ -2.18
BRCA2-202ENST00000470094 TCEAL4Q96EI5 215 aa1.44□□□□□ -2.18
BRCA2-202ENST00000470094 HIST1H2BLQ99880 126 aa1.44□□□□□ -2.18
BRCA2-202ENST00000470094 C2orf88Q9BSF0 95 aa1.44□□□□□ -2.18
BRCA2-202ENST00000470094 EFCAB11Q9BUY7 163 aa1.44□□□□□ -2.18
BRCA2-202ENST00000470094 CCDC32Q9BV29 185 aa1.44□□□□□ -2.18
BRCA2-202ENST00000470094 TMEM126AQ9H061 195 aa1.44□□□□□ -2.18
BRCA2-202ENST00000470094 CKLFQ9UBR5 152 aa1.44□□□□□ -2.18
BRCA2-202ENST00000470094 PCTPQ9UKL6 214 aa1.44□□□□□ -2.18
BRCA2-202ENST00000470094 NUP98P52948 1817 aa1.44□□□□□ -2.18
BRCA2-202ENST00000470094 VIRMAQ69YN4 1812 aaKnown RBP1.44□□□□□ -2.18
BRCA2-202ENST00000470094 ERICH3Q5RHP9 1530 aa1.44□□□□□ -2.18
BRCA2-202ENST00000470094 NISCHQ9Y2I1 1504 aa1.44□□□□□ -2.18
BRCA2-202ENST00000470094 UHRF1BP1LA0JNW5 1464 aa1.43□□□□□ -2.18
BRCA2-202ENST00000470094 ERCC6Q03468 1493 aa1.43□□□□□ -2.18
BRCA2-202ENST00000470094 CCDC88AQ3V6T2 1871 aa1.43□□□□□ -2.18
BRCA2-202ENST00000470094 ANKRD31Q8N7Z5 1873 aa1.43□□□□□ -2.18
BRCA2-202ENST00000470094 DOCK4Q8N1I0 1966 aa1.43□□□□□ -2.18
BRCA2-202ENST00000470094 XIRP1Q702N8 1843 aaKnown RBP1.43□□□□□ -2.18
BRCA2-202ENST00000470094 VPS8Q8N3P4 1428 aa1.43□□□□□ -2.18
BRCA2-202ENST00000470094 TRGV10A0A0A0MS01 117 aa1.43□□□□□ -2.18
BRCA2-202ENST00000470094 C9orf170A2RU37 121 aa1.43□□□□□ -2.18
BRCA2-202ENST00000470094 LINC00587B1AMM8 73 aa1.43□□□□□ -2.18
BRCA2-202ENST00000470094 IBA57-AS1B1ANH7 110 aa1.43□□□□□ -2.18
BRCA2-202ENST00000470094 ATP6V1G2-DDX39BF2Z307 99 aa1.43□□□□□ -2.18
BRCA2-202ENST00000470094 TRGC2P03986 189 aa1.43□□□□□ -2.18
BRCA2-202ENST00000470094 SRP14P37108 136 aaKnown RBP1.43□□□□□ -2.18
BRCA2-202ENST00000470094 GNG2P59768 71 aa1.43□□□□□ -2.18
BRCA2-202ENST00000470094 KRTAP12-1P59990 96 aa1.43□□□□□ -2.18
BRCA2-202ENST00000470094 RPS28P62857 69 aaKnown RBP1.43□□□□□ -2.18
BRCA2-202ENST00000470094 UBE2BP63146 152 aa1.43□□□□□ -2.18
BRCA2-202ENST00000470094 EIF5AP63241 154 aaKnown RBP1.43□□□□□ -2.18
BRCA2-202ENST00000470094 PLCXD2Q0VAA5 305 aa1.43□□□□□ -2.18
BRCA2-202ENST00000470094 ZNF345Q14585 488 aa1.43□□□□□ -2.18
BRCA2-202ENST00000470094 PCOTHQ58A44 107 aa1.43□□□□□ -2.18
BRCA2-202ENST00000470094 FKBP1CQ5VVH2 108 aa1.43□□□□□ -2.18
BRCA2-202ENST00000470094 C1orf140Q5VVS0 124 aa1.43□□□□□ -2.18
BRCA2-202ENST00000470094 DPPA3Q6W0C5 159 aa1.43□□□□□ -2.18
BRCA2-202ENST00000470094 PRR15Q8IV56 129 aa1.43□□□□□ -2.18
BRCA2-202ENST00000470094 OR5A1Q8NGJ0 315 aa1.43□□□□□ -2.18
BRCA2-202ENST00000470094 MAFIPQ8WZ33 124 aa1.43□□□□□ -2.18
BRCA2-202ENST00000470094 BORCS5Q969J3 196 aa1.43□□□□□ -2.18
BRCA2-202ENST00000470094 AIF1LQ9BQI0 150 aa1.43□□□□□ -2.18
BRCA2-202ENST00000470094 GINS4Q9BRT9 223 aa1.43□□□□□ -2.18
BRCA2-202ENST00000470094 ASB4Q9Y574 426 aa1.43□□□□□ -2.18
BRCA2-202ENST00000470094 LHFPL6Q9Y693 200 aa1.43□□□□□ -2.18
BRCA2-202ENST00000470094 RTL9Q8NET4 1388 aa1.43□□□□□ -2.18
BRCA2-202ENST00000470094 ICE1Q9Y2F5 2266 aa1.42□□□□□ -2.18
BRCA2-202ENST00000470094 HEATR5AQ86XA9 2040 aa1.42□□□□□ -2.18
BRCA2-202ENST00000470094 CACNA1GO43497 2377 aa1.42□□□□□ -2.18
BRCA2-202ENST00000470094 FAM135BQ49AJ0 1406 aa1.42□□□□□ -2.18
BRCA2-202ENST00000470094 TRAPPC8Q9Y2L5 1435 aa1.42□□□□□ -2.18
BRCA2-202ENST00000470094 PTPRBP23467 1997 aa1.42□□□□□ -2.18
BRCA2-202ENST00000470094 TRAV5A0A0B4J249 113 aa1.42□□□□□ -2.18
BRCA2-202ENST00000470094 C1orf196B1AJZ1 125 aa1.42□□□□□ -2.18
BRCA2-202ENST00000470094 TMEM256-PLSCR3K7ERE1 68 aa1.42□□□□□ -2.18
BRCA2-202ENST00000470094 GADD45GO95257 159 aa1.42□□□□□ -2.18
BRCA2-202ENST00000470094 PMP2P02689 132 aa1.42□□□□□ -2.18
BRCA2-202ENST00000470094 COX4I1P13073 169 aa1.42□□□□□ -2.18
BRCA2-202ENST00000470094 NFYBP25208 207 aa1.42□□□□□ -2.18
BRCA2-202ENST00000470094 INSL3P51460 131 aa1.42□□□□□ -2.18
BRCA2-202ENST00000470094 POLR2HP52434 150 aaKnown RBP1.42□□□□□ -2.18
BRCA2-202ENST00000470094 PSPHP78330 225 aa1.42□□□□□ -2.18
BRCA2-202ENST00000470094 DEFB103AP81534 67 aa1.42□□□□□ -2.18
BRCA2-202ENST00000470094 Q6ZQT0 140 aa1.42□□□□□ -2.18
BRCA2-202ENST00000470094 ZNF826PQ6ZT77 177 aa1.42□□□□□ -2.18
BRCA2-202ENST00000470094 C3orf56Q8N813 242 aa1.42□□□□□ -2.18
BRCA2-202ENST00000470094 ST6GALNAC3Q8NDV1 305 aa1.42□□□□□ -2.18
BRCA2-202ENST00000470094 WFDC11Q8NEX6 87 aa1.42□□□□□ -2.18
BRCA2-202ENST00000470094 GRPEL2Q8TAA5 225 aa1.42□□□□□ -2.18
BRCA2-202ENST00000470094 STAG3L4Q8TBR4 150 aa1.42□□□□□ -2.18
BRCA2-202ENST00000470094 ISOC1Q96CN7 298 aa1.42□□□□□ -2.18
BRCA2-202ENST00000470094 CARD19Q96LW7 228 aa1.42□□□□□ -2.18
BRCA2-202ENST00000470094 CCDC115Q96NT0 180 aa1.42□□□□□ -2.18
BRCA2-202ENST00000470094 NHP2Q9NX24 153 aaKnown RBP1.42□□□□□ -2.18
BRCA2-202ENST00000470094 SPANXCQ9NY87 97 aa1.42□□□□□ -2.18
BRCA2-202ENST00000470094 ANKRD36BQ8N2N9 1353 aa1.42□□□□□ -2.18
BRCA2-202ENST00000470094 CECR2Q9BXF3 1484 aa1.42□□□□□ -2.18
BRCA2-202ENST00000470094 KIAA2026Q5HYC2 2103 aa1.42□□□□□ -2.18
BRCA2-202ENST00000470094 PLXNA3P51805 1871 aa1.41□□□□□ -2.18
BRCA2-202ENST00000470094 NUP210Q8TEM1 1887 aaPredicted RBP1.41□□□□□ -2.18
BRCA2-202ENST00000470094 EML6Q6ZMW3 1958 aa1.41□□□□□ -2.18
BRCA2-202ENST00000470094 BCL9O00512 1426 aa1.41□□□□□ -2.18
BRCA2-202ENST00000470094 DISP1Q96F81 1524 aa1.41□□□□□ -2.18
BRCA2-202ENST00000470094 COL11A1P12107 1806 aaPredicted RBP1.41□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms