RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 OVOL3O00110 214 aa10.85□□□□□ -0.67
BRCA1-209ENST00000470026 IGLV2-11P01706 119 aa10.85□□□□□ -0.67
BRCA1-209ENST00000470026 P01737 135 aa10.85□□□□□ -0.67
BRCA1-209ENST00000470026 PSG1P11464 419 aa10.85□□□□□ -0.67
BRCA1-209ENST00000470026 FOSL1P15407 271 aa10.85□□□□□ -0.67
BRCA1-209ENST00000470026 G0S2P27469 103 aa10.85□□□□□ -0.67
BRCA1-209ENST00000470026 GPR6P46095 362 aaPredicted RBP10.85□□□□□ -0.67
BRCA1-209ENST00000470026 CAMPP49913 170 aa10.85□□□□□ -0.67
BRCA1-209ENST00000470026 Q86TA4 180 aa10.85□□□□□ -0.67
BRCA1-209ENST00000470026 KLHDC1Q8N7A1 406 aa10.85□□□□□ -0.67
BRCA1-209ENST00000470026 SH3BGRL2Q9UJC5 107 aa10.85□□□□□ -0.67
BRCA1-209ENST00000470026 TTC28Q96AY4 2481 aa10.84□□□□□ -0.67
BRCA1-209ENST00000470026 C20orf202A1L168 122 aa10.84□□□□□ -0.67
BRCA1-209ENST00000470026 FAM120AOSQ5T036 256 aa10.84□□□□□ -0.67
BRCA1-209ENST00000470026 LEMD1Q68G75 181 aa10.84□□□□□ -0.67
BRCA1-209ENST00000470026 SRSF12Q8WXF0 261 aaKnown RBP10.84□□□□□ -0.67
BRCA1-209ENST00000470026 SLC25A39Q9BZJ4 359 aaPredicted RBP10.84□□□□□ -0.67
BRCA1-209ENST00000470026 GSX1Q9H4S2 264 aaPredicted RBP10.84□□□□□ -0.67
BRCA1-209ENST00000470026 C1RLQ9NZP8 487 aa10.84□□□□□ -0.67
BRCA1-209ENST00000470026 ROS1P08922 2347 aa10.84□□□□□ -0.67
BRCA1-209ENST00000470026 IGHV3-21A0A0B4J1V1 117 aa10.84□□□□□ -0.67
BRCA1-209ENST00000470026 A6NNC1 897 aa10.84□□□□□ -0.67
BRCA1-209ENST00000470026 M0R2Z0 102 aa10.84□□□□□ -0.67
BRCA1-209ENST00000470026 BTF3P20290 206 aaKnown RBP10.84□□□□□ -0.67
BRCA1-209ENST00000470026 FOXA3P55318 350 aaPredicted RBP10.84□□□□□ -0.67
BRCA1-209ENST00000470026 DLX1P56177 255 aa10.84□□□□□ -0.67
BRCA1-209ENST00000470026 COL5A1-AS1Q5SY13 56 aa10.84□□□□□ -0.67
BRCA1-209ENST00000470026 RBPMS2Q6ZRY4 209 aaKnown RBP10.84□□□□□ -0.67
BRCA1-209ENST00000470026 WNT10AQ9GZT5 417 aa10.84□□□□□ -0.67
BRCA1-209ENST00000470026 CRXO43186 299 aaPredicted RBP10.83□□□□□ -0.68
BRCA1-209ENST00000470026 IGKV1-17P01599 117 aa10.83□□□□□ -0.68
BRCA1-209ENST00000470026 APOHP02749 345 aaPredicted RBP10.83□□□□□ -0.68
BRCA1-209ENST00000470026 APELAP0DMC3 54 aa10.83□□□□□ -0.68
BRCA1-209ENST00000470026 DMRTA1Q5VZB9 504 aa10.83□□□□□ -0.68
BRCA1-209ENST00000470026 LCN12Q6JVE5 192 aa10.83□□□□□ -0.68
BRCA1-209ENST00000470026 FBXL15Q9H469 300 aa10.83□□□□□ -0.68
BRCA1-209ENST00000470026 RPH3ALQ9UNE2 315 aa10.83□□□□□ -0.68
BRCA1-209ENST00000470026 DMXL1Q9Y485 3027 aa10.83□□□□□ -0.68
BRCA1-209ENST00000470026 RP1L1Q8IWN7 2480 aaPredicted RBP10.83□□□□□ -0.68
BRCA1-209ENST00000470026 TRAV9-2A0A087WT02 112 aa10.82□□□□□ -0.68
BRCA1-209ENST00000470026 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.82□□□□□ -0.68
BRCA1-209ENST00000470026 ZNF785A8K8V0 405 aa10.82□□□□□ -0.68
BRCA1-209ENST00000470026 CD3EP07766 207 aa10.82□□□□□ -0.68
BRCA1-209ENST00000470026 OR2D3Q8NGH3 330 aa10.82□□□□□ -0.68
BRCA1-209ENST00000470026 CHCHD1Q96BP2 118 aaKnown RBP10.82□□□□□ -0.68
BRCA1-209ENST00000470026 LYZP61626 148 aa10.82□□□□□ -0.68
BRCA1-209ENST00000470026 RNASEKQ6P5S7 137 aaKnown RBP10.82□□□□□ -0.68
BRCA1-209ENST00000470026 LY6G5BQ8NDX9 201 aa10.82□□□□□ -0.68
BRCA1-209ENST00000470026 RPEQ96AT9 228 aa10.82□□□□□ -0.68
BRCA1-209ENST00000470026 NDFIP1Q9BT67 221 aa10.82□□□□□ -0.68
BRCA1-209ENST00000470026 MRPS16Q9Y3D3 137 aaKnown RBP10.82□□□□□ -0.68
BRCA1-209ENST00000470026 PKDREJQ9NTG1 2253 aa10.82□□□□□ -0.68
BRCA1-209ENST00000470026 PPIAL4CA0A0B4J2A2 164 aa10.81□□□□□ -0.68
BRCA1-209ENST00000470026 H3BTX0 84 aa10.81□□□□□ -0.68
BRCA1-209ENST00000470026 K7EIM0 57 aa10.81□□□□□ -0.68
BRCA1-209ENST00000470026 HAX1O00165 279 aa10.81□□□□□ -0.68
BRCA1-209ENST00000470026 PPIAL4GP0DN37 164 aa10.81□□□□□ -0.68
BRCA1-209ENST00000470026 CYB5R2Q6BCY4 276 aa10.81□□□□□ -0.68
BRCA1-209ENST00000470026 GATD1Q8NB37 220 aa10.81□□□□□ -0.68
BRCA1-209ENST00000470026 DAZAP1Q96EP5 407 aaKnown RBP10.81□□□□□ -0.68
BRCA1-209ENST00000470026 PGLYRP4Q96LB8 373 aa10.81□□□□□ -0.68
BRCA1-209ENST00000470026 VKORC1Q9BQB6 163 aa10.81□□□□□ -0.68
BRCA1-209ENST00000470026 SHANK2-AS3Q9BTD1 123 aa10.81□□□□□ -0.68
BRCA1-209ENST00000470026 LAMTOR2Q9Y2Q5 125 aa10.81□□□□□ -0.68
BRCA1-209ENST00000470026 MGAQ8IWI9 3026 aa10.81□□□□□ -0.68
BRCA1-209ENST00000470026 BSNQ9UPA5 3926 aa10.81□□□□□ -0.68
BRCA1-209ENST00000470026 H3BRN7 92 aa10.81□□□□□ -0.68
BRCA1-209ENST00000470026 HNRNPA3P51991 378 aaKnown RBP10.81□□□□□ -0.68
BRCA1-209ENST00000470026 PRR30Q53SZ7 412 aaPredicted RBP10.81□□□□□ -0.68
BRCA1-209ENST00000470026 LDLRAD2Q5SZI1 272 aa10.81□□□□□ -0.68
BRCA1-209ENST00000470026 Q6ZN92 141 aa10.81□□□□□ -0.68
BRCA1-209ENST00000470026 TXN2Q99757 166 aa10.81□□□□□ -0.68
BRCA1-209ENST00000470026 RASL11BQ9BPW5 248 aa10.81□□□□□ -0.68
BRCA1-209ENST00000470026 GOLT1BQ9Y3E0 138 aa10.81□□□□□ -0.68
BRCA1-209ENST00000470026 TRBV19A0A075B6N1 114 aa10.8□□□□□ -0.68
BRCA1-209ENST00000470026 LINC00614P0C842 121 aa10.8□□□□□ -0.68
BRCA1-209ENST00000470026 TSPOP30536 169 aa10.8□□□□□ -0.68
BRCA1-209ENST00000470026 PRB3Q04118 309 aaPredicted RBP10.8□□□□□ -0.68
BRCA1-209ENST00000470026 MAJINQ3KP22 176 aa10.8□□□□□ -0.68
BRCA1-209ENST00000470026 SPATA12Q7Z6I5 190 aa10.8□□□□□ -0.68
BRCA1-209ENST00000470026 LYPD1Q8N2G4 141 aa10.8□□□□□ -0.68
BRCA1-209ENST00000470026 CIARTQ8N365 385 aaPredicted RBP10.8□□□□□ -0.68
BRCA1-209ENST00000470026 KIR3DL3Q8N743 410 aa10.8□□□□□ -0.68
BRCA1-209ENST00000470026 TMEM75Q8N9X5 138 aa10.8□□□□□ -0.68
BRCA1-209ENST00000470026 RNF24Q9Y225 148 aa10.8□□□□□ -0.68
BRCA1-209ENST00000470026 LOC102724200A0A096LPH7 203 aaPredicted RBP10.79□□□□□ -0.68
BRCA1-209ENST00000470026 TRAV8-1A0A0A6YYK1 113 aa10.79□□□□□ -0.68
BRCA1-209ENST00000470026 LYNX1G3V0Z9 82 aa10.79□□□□□ -0.68
BRCA1-209ENST00000470026 MRPS12O15235 138 aaKnown RBP10.79□□□□□ -0.68
BRCA1-209ENST00000470026 LYNX1P0DP58 116 aa10.79□□□□□ -0.68
BRCA1-209ENST00000470026 COX7A1P24310 79 aa10.79□□□□□ -0.68
BRCA1-209ENST00000470026 ATOH7Q8N100 152 aa10.79□□□□□ -0.68
BRCA1-209ENST00000470026 EXOC3-AS1Q8N2X6 119 aa10.79□□□□□ -0.68
BRCA1-209ENST00000470026 TMEM70Q9BUB7 260 aa10.79□□□□□ -0.68
BRCA1-209ENST00000470026 SCNM1Q9BWG6 230 aa10.79□□□□□ -0.68
BRCA1-209ENST00000470026 ZFP30Q9Y2G7 519 aa10.79□□□□□ -0.68
BRCA1-209ENST00000470026 PCNX1Q96RV3 2341 aa10.79□□□□□ -0.68
BRCA1-209ENST00000470026 CEP250Q9BV73 2442 aa10.79□□□□□ -0.68
BRCA1-209ENST00000470026 NPSP0C0P6 89 aa10.79□□□□□ -0.68
BRCA1-209ENST00000470026 COL8A1P27658 744 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 114.4 ms