RNA–Protein interactions for RNA: ENST00000469300.6

LIMS2-213, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 4,807 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-213ENST00000469300 EPDR1Q9UM22 224 aa12.33□□□□□ -0.44
LIMS2-213ENST00000469300 IGHV3OR16-8A0A075B7F1 116 aa12.33□□□□□ -0.44
LIMS2-213ENST00000469300 IGKV1-5P01602 117 aa12.33□□□□□ -0.44
LIMS2-213ENST00000469300 ATP5G3P48201 142 aa12.33□□□□□ -0.44
LIMS2-213ENST00000469300 OR10W1Q8NGF6 305 aa12.33□□□□□ -0.44
LIMS2-213ENST00000469300 H7C2G1 150 aa12.32□□□□□ -0.44
LIMS2-213ENST00000469300 C10orf55Q5SWW7 151 aa12.32□□□□□ -0.44
LIMS2-213ENST00000469300 C1orf194Q5T5A4 169 aa12.32□□□□□ -0.44
LIMS2-213ENST00000469300 TREML4Q6UXN2 200 aa12.32□□□□□ -0.44
LIMS2-213ENST00000469300 TMEM14EPQ6UXP3 125 aa12.32□□□□□ -0.44
LIMS2-213ENST00000469300 NEU1Q99519 415 aa12.32□□□□□ -0.44
LIMS2-213ENST00000469300 NRN1Q9NPD7 142 aa12.32□□□□□ -0.44
LIMS2-213ENST00000469300 C9JCJ5 164 aa12.32□□□□□ -0.44
LIMS2-213ENST00000469300 LINC01587Q99440 93 aa12.32□□□□□ -0.44
LIMS2-213ENST00000469300 FAM208BQ5VWN6 2430 aa12.32□□□□□ -0.44
LIMS2-213ENST00000469300 TSPAN13O95857 204 aa12.32□□□□□ -0.44
LIMS2-213ENST00000469300 TNFRSF18Q9Y5U5 241 aa12.32□□□□□ -0.44
LIMS2-213ENST00000469300 SRSF3P84103 164 aaKnown RBP12.32□□□□□ -0.44
LIMS2-213ENST00000469300 BRD3OSQ6XYD6 125 aa12.32□□□□□ -0.44
LIMS2-213ENST00000469300 OR2K2Q8NGT1 345 aa12.32□□□□□ -0.44
LIMS2-213ENST00000469300 REG4Q9BYZ8 158 aa12.32□□□□□ -0.44
LIMS2-213ENST00000469300 HELZP42694 1942 aaKnown RBP12.32□□□□□ -0.44
LIMS2-213ENST00000469300 TRAV21A0A0B4J279 112 aa12.31□□□□□ -0.44
LIMS2-213ENST00000469300 SAA4P35542 130 aa12.31□□□□□ -0.44
LIMS2-213ENST00000469300 ACACBO00763 2458 aa12.31□□□□□ -0.44
LIMS2-213ENST00000469300 FNDC10F2Z333 226 aa12.31□□□□□ -0.44
LIMS2-213ENST00000469300 J3QLI3 93 aa12.31□□□□□ -0.44
LIMS2-213ENST00000469300 TMEM219Q86XT9 240 aa12.31□□□□□ -0.44
LIMS2-213ENST00000469300 FER1L6-AS1Q8NA97 138 aa12.31□□□□□ -0.44
LIMS2-213ENST00000469300 M0R381 172 aa12.31□□□□□ -0.44
LIMS2-213ENST00000469300 SERF1AO75920 110 aa12.31□□□□□ -0.44
LIMS2-213ENST00000469300 AMBPP02760 352 aa12.31□□□□□ -0.44
LIMS2-213ENST00000469300 GGTLC1Q9BX51 225 aa12.31□□□□□ -0.44
LIMS2-213ENST00000469300 LTBP2Q14767 1821 aa12.31□□□□□ -0.44
LIMS2-213ENST00000469300 FAM223BA6NKX1 122 aa12.31□□□□□ -0.44
LIMS2-213ENST00000469300 SRD5A1P18405 259 aa12.31□□□□□ -0.44
LIMS2-213ENST00000469300 TEX36Q5VZQ5 186 aa12.31□□□□□ -0.44
LIMS2-213ENST00000469300 FAM223AQ8IWN6 122 aa12.31□□□□□ -0.44
LIMS2-213ENST00000469300 TRAV9-2A0A087WT02 112 aa12.3□□□□□ -0.44
LIMS2-213ENST00000469300 ZNF324O75467 553 aaPredicted RBP12.3□□□□□ -0.44
LIMS2-213ENST00000469300 LY6HO94772 140 aa12.3□□□□□ -0.44
LIMS2-213ENST00000469300 Q6ZR03 302 aa12.3□□□□□ -0.44
LIMS2-213ENST00000469300 ST6GALNAC6Q969X2 333 aa12.3□□□□□ -0.44
LIMS2-213ENST00000469300 C5orf24Q7Z6I8 188 aa12.3□□□□□ -0.44
LIMS2-213ENST00000469300 COPS9Q8WXC6 57 aa12.3□□□□□ -0.44
LIMS2-213ENST00000469300 TRBV24-1A0A075B6N3 115 aa12.3□□□□□ -0.44
LIMS2-213ENST00000469300 LINC00473A8K010 186 aa12.3□□□□□ -0.44
LIMS2-213ENST00000469300 ZNF524Q96C55 264 aa12.3□□□□□ -0.44
LIMS2-213ENST00000469300 DOCK10Q96BY6 2186 aa12.3□□□□□ -0.44
LIMS2-213ENST00000469300 DKK1O94907 266 aa12.3□□□□□ -0.44
LIMS2-213ENST00000469300 ERVK11-1P61568 191 aa12.3□□□□□ -0.44
LIMS2-213ENST00000469300 ZNF414Q96IQ9 312 aa12.3□□□□□ -0.44
LIMS2-213ENST00000469300 OR11H12B2RN74 326 aa12.29□□□□□ -0.44
LIMS2-213ENST00000469300 OR11H1Q8NG94 326 aa12.29□□□□□ -0.44
LIMS2-213ENST00000469300 OR11H2Q8NH07 326 aa12.29□□□□□ -0.44
LIMS2-213ENST00000469300 MRPL16Q9NX20 251 aaKnown RBP12.29□□□□□ -0.44
LIMS2-213ENST00000469300 GTF3C1Q12789 2109 aa12.29□□□□□ -0.44
LIMS2-213ENST00000469300 WT1P19544 449 aaPredicted RBP12.29□□□□□ -0.44
LIMS2-213ENST00000469300 UBE2V1Q13404 147 aa12.29□□□□□ -0.44
LIMS2-213ENST00000469300 SIGLEC15Q6ZMC9 328 aa12.29□□□□□ -0.44
LIMS2-213ENST00000469300 IMMP2LQ96T52 175 aa12.29□□□□□ -0.44
LIMS2-213ENST00000469300 GTSCR1Q86UQ5 136 aa12.29□□□□□ -0.44
LIMS2-213ENST00000469300 OSTCQ9NRP0 149 aa12.29□□□□□ -0.44
LIMS2-213ENST00000469300 PSG8Q9UQ74 426 aa12.29□□□□□ -0.44
LIMS2-213ENST00000469300 E9PQ18 207 aa12.28□□□□□ -0.44
LIMS2-213ENST00000469300 ZNF562Q6V9R5 426 aa12.28□□□□□ -0.44
LIMS2-213ENST00000469300 LINC00311Q8N616 119 aa12.28□□□□□ -0.44
LIMS2-213ENST00000469300 ZGRF1Q86YA3 2104 aa12.28□□□□□ -0.44
LIMS2-213ENST00000469300 TRAV1-1A0A0B4J248 108 aa12.28□□□□□ -0.44
LIMS2-213ENST00000469300 ZNF585BQ52M93 769 aa12.28□□□□□ -0.44
LIMS2-213ENST00000469300 LINC00527Q9UJ94 153 aa12.28□□□□□ -0.44
LIMS2-213ENST00000469300 RNF114Q9Y508 228 aa12.28□□□□□ -0.44
LIMS2-213ENST00000469300 RNF223E7ERA6 249 aa12.28□□□□□ -0.44
LIMS2-213ENST00000469300 TMEM262E9PQX1 116 aa12.28□□□□□ -0.44
LIMS2-213ENST00000469300 PSG1P11464 419 aa12.28□□□□□ -0.44
LIMS2-213ENST00000469300 SPRY4Q9C004 299 aa12.28□□□□□ -0.44
LIMS2-213ENST00000469300 GEMIN7Q9H840 131 aaKnown RBP12.28□□□□□ -0.44
LIMS2-213ENST00000469300 RNASE4P34096 147 aaKnown RBP12.28□□□□□ -0.44
LIMS2-213ENST00000469300 C9orf139Q6ZV77 190 aa12.28□□□□□ -0.44
LIMS2-213ENST00000469300 PRELID3AQ96N28 172 aa12.28□□□□□ -0.44
LIMS2-213ENST00000469300 FNDC4Q9H6D8 234 aaPredicted RBP12.28□□□□□ -0.44
LIMS2-213ENST00000469300 TMEM242Q9NWH2 141 aa12.28□□□□□ -0.44
LIMS2-213ENST00000469300 IGHV2-70DA0A0C4DH43 119 aa12.27□□□□□ -0.44
LIMS2-213ENST00000469300 C7orf71A4D174 169 aa12.27□□□□□ -0.44
LIMS2-213ENST00000469300 SEC11AP67812 179 aa12.27□□□□□ -0.44
LIMS2-213ENST00000469300 GFI1BQ5VTD9 330 aa12.27□□□□□ -0.44
LIMS2-213ENST00000469300 KAAG1Q9UBP8 84 aa12.27□□□□□ -0.44
LIMS2-213ENST00000469300 TRGV11A0A075B6L2 103 aa12.27□□□□□ -0.44
LIMS2-213ENST00000469300 IGHV1-69DA0A0B4J2H0 117 aa12.27□□□□□ -0.44
LIMS2-213ENST00000469300 IGHV1-69P01742 117 aa12.27□□□□□ -0.44
LIMS2-213ENST00000469300 TMEM101Q96IK0 257 aa12.27□□□□□ -0.44
LIMS2-213ENST00000469300 CIRBPQ14011 172 aaKnown RBP12.27□□□□□ -0.45
LIMS2-213ENST00000469300 IZUMO1RA6ND01 250 aa12.27□□□□□ -0.45
LIMS2-213ENST00000469300 CKS1BP61024 79 aa12.27□□□□□ -0.45
LIMS2-213ENST00000469300 ORAOV1Q8WV07 137 aa12.27□□□□□ -0.45
LIMS2-213ENST00000469300 PCNTO95613 3336 aa12.27□□□□□ -0.45
LIMS2-213ENST00000469300 TRGV2A0A075B6R0 118 aa12.26□□□□□ -0.45
LIMS2-213ENST00000469300 PYYP10082 97 aa12.26□□□□□ -0.45
LIMS2-213ENST00000469300 RPL23P62829 140 aaKnown RBP12.26□□□□□ -0.45
LIMS2-213ENST00000469300 ZNF581Q9P0T4 197 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms