RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 FXYD5Q96DB9 178 aa7.32□□□□□ -1.24
SMC1A-205ENST00000469129 SHANK2-AS3Q9BTD1 123 aa7.32□□□□□ -1.24
SMC1A-205ENST00000469129 SLC25A39Q9BZJ4 359 aaPredicted RBP7.32□□□□□ -1.24
SMC1A-205ENST00000469129 GSX1Q9H4S2 264 aaPredicted RBP7.32□□□□□ -1.24
SMC1A-205ENST00000469129 MRPL27Q9P0M9 148 aaKnown RBP7.32□□□□□ -1.24
SMC1A-205ENST00000469129 TACC2O95359 2948 aa7.32□□□□□ -1.24
SMC1A-205ENST00000469129 SPG11Q96JI7 2443 aa7.31□□□□□ -1.24
SMC1A-205ENST00000469129 TRAV5A0A0B4J249 113 aa7.31□□□□□ -1.24
SMC1A-205ENST00000469129 GGTLC3B5MD39 225 aa7.31□□□□□ -1.24
SMC1A-205ENST00000469129 H7BYZ3 331 aa7.31□□□□□ -1.24
SMC1A-205ENST00000469129 BMPR1BO00238 502 aa7.31□□□□□ -1.24
SMC1A-205ENST00000469129 AMY1AP04745 511 aa7.31□□□□□ -1.24
SMC1A-205ENST00000469129 PYYP10082 97 aa7.31□□□□□ -1.24
SMC1A-205ENST00000469129 FOLR2P14207 255 aa7.31□□□□□ -1.24
SMC1A-205ENST00000469129 ATF4P18848 351 aaPredicted RBP7.31□□□□□ -1.24
SMC1A-205ENST00000469129 S100PP25815 95 aa7.31□□□□□ -1.24
SMC1A-205ENST00000469129 RAB9AP51151 201 aa7.31□□□□□ -1.24
SMC1A-205ENST00000469129 CNN1P51911 297 aaKnown RBP7.31□□□□□ -1.24
SMC1A-205ENST00000469129 RNF212Q495C1 297 aa7.31□□□□□ -1.24
SMC1A-205ENST00000469129 KRTAP1-3Q8IUG1 177 aa7.31□□□□□ -1.24
SMC1A-205ENST00000469129 ZNF491Q8N8L2 437 aa7.31□□□□□ -1.24
SMC1A-205ENST00000469129 HIST1H2BAQ96A08 127 aa7.31□□□□□ -1.24
SMC1A-205ENST00000469129 BTF3L4Q96K17 158 aa7.31□□□□□ -1.24
SMC1A-205ENST00000469129 OR5B12Q96R08 314 aa7.31□□□□□ -1.24
SMC1A-205ENST00000469129 AKAP9Q99996 3911 aa7.31□□□□□ -1.24
SMC1A-205ENST00000469129 CCDC168Q8NDH2 2452 aa7.3□□□□□ -1.24
SMC1A-205ENST00000469129 OR2T8A6NH00 312 aa7.3□□□□□ -1.24
SMC1A-205ENST00000469129 SH2D7A6NKC9 451 aaPredicted RBP7.3□□□□□ -1.24
SMC1A-205ENST00000469129 COLCA2A8K830 154 aa7.3□□□□□ -1.24
SMC1A-205ENST00000469129 F8W735 103 aaPredicted RBP7.3□□□□□ -1.24
SMC1A-205ENST00000469129 G3V318 75 aa7.3□□□□□ -1.24
SMC1A-205ENST00000469129 TGOLN2O43493 480 aa7.3□□□□□ -1.24
SMC1A-205ENST00000469129 S100A9P06702 114 aaKnown RBP7.3□□□□□ -1.24
SMC1A-205ENST00000469129 HIST1H1EP10412 219 aaKnown RBP7.3□□□□□ -1.24
SMC1A-205ENST00000469129 NPPCP23582 126 aa7.3□□□□□ -1.24
SMC1A-205ENST00000469129 GNG4P50150 75 aa7.3□□□□□ -1.24
SMC1A-205ENST00000469129 TAS2R60P59551 318 aa7.3□□□□□ -1.24
SMC1A-205ENST00000469129 SUMO1P63165 101 aaKnown RBP7.3□□□□□ -1.24
SMC1A-205ENST00000469129 RELQ04864 619 aaPredicted RBP7.3□□□□□ -1.24
SMC1A-205ENST00000469129 ATP5G2Q06055 141 aa7.3□□□□□ -1.24
SMC1A-205ENST00000469129 DEFB112Q30KQ8 113 aa7.3□□□□□ -1.24
SMC1A-205ENST00000469129 FAM209BQ5JX69 171 aa7.3□□□□□ -1.24
SMC1A-205ENST00000469129 KCNIP4Q6PIL6 250 aa7.3□□□□□ -1.24
SMC1A-205ENST00000469129 LINC01551Q86U37 167 aa7.3□□□□□ -1.24
SMC1A-205ENST00000469129 C5orf17Q8NAS9 161 aa7.3□□□□□ -1.24
SMC1A-205ENST00000469129 DERL1Q9BUN8 251 aa7.3□□□□□ -1.24
SMC1A-205ENST00000469129 OTORQ9NRC9 128 aa7.3□□□□□ -1.24
SMC1A-205ENST00000469129 RABAC1Q9UI14 185 aa7.3□□□□□ -1.24
SMC1A-205ENST00000469129 VPREB3Q9UKI3 123 aa7.3□□□□□ -1.24
SMC1A-205ENST00000469129 HELTA6NFD8 242 aa7.29□□□□□ -1.24
SMC1A-205ENST00000469129 PEX7O00628 323 aa7.29□□□□□ -1.24
SMC1A-205ENST00000469129 TRGV3P03979 118 aa7.29□□□□□ -1.24
SMC1A-205ENST00000469129 SLC25A5P05141 298 aaKnown RBP7.29□□□□□ -1.24
SMC1A-205ENST00000469129 CTSGP08311 255 aa7.29□□□□□ -1.24
SMC1A-205ENST00000469129 NBEAP1P0C6P0 100 aa7.29□□□□□ -1.24
SMC1A-205ENST00000469129 RPL7P18124 248 aaKnown RBP7.29□□□□□ -1.24
SMC1A-205ENST00000469129 CRYBB3P26998 211 aa7.29□□□□□ -1.24
SMC1A-205ENST00000469129 GPR183P32249 361 aa7.29□□□□□ -1.24
SMC1A-205ENST00000469129 RPL35P42766 123 aaKnown RBP7.29□□□□□ -1.24
SMC1A-205ENST00000469129 IER3P46695 156 aa7.29□□□□□ -1.24
SMC1A-205ENST00000469129 RAB5BP61020 215 aa7.29□□□□□ -1.24
SMC1A-205ENST00000469129 UBE2G1P62253 170 aa7.29□□□□□ -1.24
SMC1A-205ENST00000469129 PDE6HQ13956 83 aa7.29□□□□□ -1.24
SMC1A-205ENST00000469129 ZNF329Q86UD4 541 aa7.29□□□□□ -1.24
SMC1A-205ENST00000469129 LURAP1LQ8IV03 231 aa7.29□□□□□ -1.24
SMC1A-205ENST00000469129 LYPD1Q8N2G4 141 aa7.29□□□□□ -1.24
SMC1A-205ENST00000469129 MAPK1IP1LQ8NDC0 245 aa7.29□□□□□ -1.24
SMC1A-205ENST00000469129 C2CD4CQ8TF44 421 aa7.29□□□□□ -1.24
SMC1A-205ENST00000469129 ISOC2Q96AB3 205 aa7.29□□□□□ -1.24
SMC1A-205ENST00000469129 SMIM12Q96EX1 92 aa7.29□□□□□ -1.24
SMC1A-205ENST00000469129 USMG5Q96IX5 58 aa7.29□□□□□ -1.24
SMC1A-205ENST00000469129 GPR82Q96P67 336 aa7.29□□□□□ -1.24
SMC1A-205ENST00000469129 FOXC2Q99958 501 aa7.29□□□□□ -1.24
SMC1A-205ENST00000469129 ELOVL1Q9BW60 279 aa7.29□□□□□ -1.24
SMC1A-205ENST00000469129 MLXQ9UH92 298 aa7.29□□□□□ -1.24
SMC1A-205ENST00000469129 CDC42EP3Q9UKI2 254 aa7.29□□□□□ -1.24
SMC1A-205ENST00000469129 S4R3C0 116 aa7.29□□□□□ -1.24
SMC1A-205ENST00000469129 OTOGQ6ZRI0 2925 aa7.28□□□□□ -1.24
SMC1A-205ENST00000469129 A0A0G2JLM5 398 aa7.28□□□□□ -1.24
SMC1A-205ENST00000469129 TMEM89A2RUT3 159 aa7.28□□□□□ -1.24
SMC1A-205ENST00000469129 ZNF98A6NK75 572 aa7.28□□□□□ -1.24
SMC1A-205ENST00000469129 C1orf196B1AJZ1 125 aa7.28□□□□□ -1.24
SMC1A-205ENST00000469129 IGHV3-23P01764 117 aa7.28□□□□□ -1.24
SMC1A-205ENST00000469129 IGHV4-59P01825 116 aa7.28□□□□□ -1.24
SMC1A-205ENST00000469129 RAB5AP20339 215 aa7.28□□□□□ -1.24
SMC1A-205ENST00000469129 SRP14P37108 136 aaKnown RBP7.28□□□□□ -1.24
SMC1A-205ENST00000469129 MYCNOSP40205 109 aa7.28□□□□□ -1.24
SMC1A-205ENST00000469129 TPPP2P59282 170 aa7.28□□□□□ -1.24
SMC1A-205ENST00000469129 FLI1Q01543 452 aaPredicted RBP7.28□□□□□ -1.24
SMC1A-205ENST00000469129 USF2Q15853 346 aaPredicted RBP7.28□□□□□ -1.24
SMC1A-205ENST00000469129 CENPWQ5EE01 88 aa7.28□□□□□ -1.24
SMC1A-205ENST00000469129 ZNF343Q6P1L6 599 aa7.28□□□□□ -1.24
SMC1A-205ENST00000469129 Q6YL49 198 aa7.28□□□□□ -1.24
SMC1A-205ENST00000469129 FAM24BQ8N5W8 94 aa7.28□□□□□ -1.24
SMC1A-205ENST00000469129 BLNKQ8WV28 456 aa7.28□□□□□ -1.24
SMC1A-205ENST00000469129 SFRP2Q96HF1 295 aa7.28□□□□□ -1.24
SMC1A-205ENST00000469129 CCDC140Q96MF4 163 aa7.28□□□□□ -1.24
SMC1A-205ENST00000469129 ATG101Q9BSB4 218 aa7.28□□□□□ -1.24
SMC1A-205ENST00000469129 GNB4Q9HAV0 340 aa7.28□□□□□ -1.24
SMC1A-205ENST00000469129 TRBV20OR9-2A0A075B6H5 130 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms