RNA–Protein interactions for RNA: ENST00000467563.3

CHRNA4-203, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 2,098 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-203ENST00000467563 AP4M1O00189 453 aa14.61□□□□□ -0.07
CHRNA4-203ENST00000467563 HOXA3O43365 443 aaPredicted RBP14.61□□□□□ -0.07
CHRNA4-203ENST00000467563 OR2C1O95371 312 aa14.61□□□□□ -0.07
CHRNA4-203ENST00000467563 SNRPCP09234 159 aaKnown RBP14.61□□□□□ -0.07
CHRNA4-203ENST00000467563 ZNF414Q96IQ9 312 aa14.61□□□□□ -0.07
CHRNA4-203ENST00000467563 SCO2A0A1W2PP80 73 aa14.6□□□□□ -0.07
CHRNA4-203ENST00000467563 F6UZH7 168 aa14.6□□□□□ -0.07
CHRNA4-203ENST00000467563 NDUFB4O95168 129 aa14.6□□□□□ -0.07
CHRNA4-203ENST00000467563 CLEC3BP05452 202 aa14.6□□□□□ -0.07
CHRNA4-203ENST00000467563 USF2Q15853 346 aaPredicted RBP14.6□□□□□ -0.07
CHRNA4-203ENST00000467563 TMEM95Q3KNT9 176 aa14.6□□□□□ -0.07
CHRNA4-203ENST00000467563 Q8WTZ3 238 aa14.6□□□□□ -0.07
CHRNA4-203ENST00000467563 DERL1Q9BUN8 251 aa14.6□□□□□ -0.07
CHRNA4-203ENST00000467563 GGTLC3B5MD39 225 aa14.59□□□□□ -0.07
CHRNA4-203ENST00000467563 TRGV3P03979 118 aa14.59□□□□□ -0.07
CHRNA4-203ENST00000467563 SDF2L1Q9HCN8 221 aa14.59□□□□□ -0.07
CHRNA4-203ENST00000467563 GP9P14770 177 aa14.59□□□□□ -0.07
CHRNA4-203ENST00000467563 ATP5G2Q06055 141 aa14.59□□□□□ -0.07
CHRNA4-203ENST00000467563 RHEBQ15382 184 aa14.59□□□□□ -0.07
CHRNA4-203ENST00000467563 CLEC19AQ6UXS0 136 aa14.59□□□□□ -0.07
CHRNA4-203ENST00000467563 STXBP6Q8NFX7 210 aa14.59□□□□□ -0.07
CHRNA4-203ENST00000467563 EEF1AKMT3Q96AZ1 226 aa14.59□□□□□ -0.07
CHRNA4-203ENST00000467563 IGHV3-35A0A0C4DH35 117 aa14.58□□□□□ -0.08
CHRNA4-203ENST00000467563 A0A1W2PRE2 83 aa14.58□□□□□ -0.08
CHRNA4-203ENST00000467563 FAM223BA6NKX1 122 aa14.58□□□□□ -0.08
CHRNA4-203ENST00000467563 FAM223AQ8IWN6 122 aa14.58□□□□□ -0.08
CHRNA4-203ENST00000467563 SHANK2-AS3Q9BTD1 123 aa14.58□□□□□ -0.08
CHRNA4-203ENST00000467563 TRBV7-1A0A0A6YYK4 115 aa14.57□□□□□ -0.08
CHRNA4-203ENST00000467563 H3BRN7 92 aa14.57□□□□□ -0.08
CHRNA4-203ENST00000467563 SCGB2A1O75556 95 aa14.57□□□□□ -0.08
CHRNA4-203ENST00000467563 CFHR3Q02985 330 aa14.57□□□□□ -0.08
CHRNA4-203ENST00000467563 ZNF343Q6P1L6 599 aa14.57□□□□□ -0.08
CHRNA4-203ENST00000467563 BRI3O95415 125 aa14.57□□□□□ -0.08
CHRNA4-203ENST00000467563 TPPP2P59282 170 aa14.57□□□□□ -0.08
CHRNA4-203ENST00000467563 SUMO1P63165 101 aaKnown RBP14.57□□□□□ -0.08
CHRNA4-203ENST00000467563 SIGLECL1Q8N7X8 197 aa14.57□□□□□ -0.08
CHRNA4-203ENST00000467563 KLK15Q9H2R5 256 aa14.57□□□□□ -0.08
CHRNA4-203ENST00000467563 NAT8Q9UHE5 227 aa14.57□□□□□ -0.08
CHRNA4-203ENST00000467563 MYO9AB2RTY4 2548 aa14.56□□□□□ -0.08
CHRNA4-203ENST00000467563 NOTCH2Q04721 2471 aa14.56□□□□□ -0.08
CHRNA4-203ENST00000467563 H3BUA1 57 aa14.56□□□□□ -0.08
CHRNA4-203ENST00000467563 TMEM241Q24JQ0 296 aa14.56□□□□□ -0.08
CHRNA4-203ENST00000467563 C11orf52Q96A22 123 aa14.56□□□□□ -0.08
CHRNA4-203ENST00000467563 ZNF580Q9UK33 172 aa14.56□□□□□ -0.08
CHRNA4-203ENST00000467563 CD5LO43866 347 aa14.56□□□□□ -0.08
CHRNA4-203ENST00000467563 IGLV1-40P01703 118 aa14.56□□□□□ -0.08
CHRNA4-203ENST00000467563 PNRC1Q12796 327 aaPredicted RBP14.56□□□□□ -0.08
CHRNA4-203ENST00000467563 ZNF600Q6ZNG1 722 aa14.56□□□□□ -0.08
CHRNA4-203ENST00000467563 BLNKQ8WV28 456 aa14.56□□□□□ -0.08
CHRNA4-203ENST00000467563 GAR1Q9NY12 217 aaKnown RBP14.56□□□□□ -0.08
CHRNA4-203ENST00000467563 TGOLN2O43493 480 aa14.55□□□□□ -0.08
CHRNA4-203ENST00000467563 NBEAP1P0C6P0 100 aa14.55□□□□□ -0.08
CHRNA4-203ENST00000467563 LCNL1Q6ZST4 164 aa14.55□□□□□ -0.08
CHRNA4-203ENST00000467563 DUX5Q96PT3 197 aa14.55□□□□□ -0.08
CHRNA4-203ENST00000467563 ELOVL1Q9BW60 279 aa14.55□□□□□ -0.08
CHRNA4-203ENST00000467563 TMEM14CQ9P0S9 112 aa14.55□□□□□ -0.08
CHRNA4-203ENST00000467563 TMA7Q9Y2S6 64 aaKnown RBP14.55□□□□□ -0.08
CHRNA4-203ENST00000467563 TRBV20OR9-2A0A075B6H5 130 aa14.54□□□□□ -0.08
CHRNA4-203ENST00000467563 IGHV3OR16-8A0A075B7F1 116 aa14.54□□□□□ -0.08
CHRNA4-203ENST00000467563 PF4V1P10720 104 aa14.54□□□□□ -0.08
CHRNA4-203ENST00000467563 CRYBB3P26998 211 aa14.54□□□□□ -0.08
CHRNA4-203ENST00000467563 TEX29Q8N6K0 151 aa14.54□□□□□ -0.08
CHRNA4-203ENST00000467563 GNB4Q9HAV0 340 aa14.54□□□□□ -0.08
CHRNA4-203ENST00000467563 ZNF98A6NK75 572 aa14.54□□□□□ -0.08
CHRNA4-203ENST00000467563 H3BTX0 84 aa14.54□□□□□ -0.08
CHRNA4-203ENST00000467563 RPL23P62829 140 aaKnown RBP14.54□□□□□ -0.08
CHRNA4-203ENST00000467563 TOMM20LQ6UXN7 152 aa14.54□□□□□ -0.08
CHRNA4-203ENST00000467563 ZNF329Q86UD4 541 aa14.54□□□□□ -0.08
CHRNA4-203ENST00000467563 SMCO4Q9NRQ5 59 aa14.54□□□□□ -0.08
CHRNA4-203ENST00000467563 PPP5D1E7EU14 171 aa14.53□□□□□ -0.08
CHRNA4-203ENST00000467563 SRP14P37108 136 aaKnown RBP14.53□□□□□ -0.08
CHRNA4-203ENST00000467563 MYCNOSP40205 109 aa14.53□□□□□ -0.08
CHRNA4-203ENST00000467563 RANP62826 216 aaKnown RBP14.53□□□□□ -0.08
CHRNA4-203ENST00000467563 ADIRFQ15847 76 aa14.53□□□□□ -0.08
CHRNA4-203ENST00000467563 ZFAND3Q9H8U3 227 aa14.53□□□□□ -0.08
CHRNA4-203ENST00000467563 ZNF702PQ9H963 129 aa14.53□□□□□ -0.08
CHRNA4-203ENST00000467563 YAE1D1Q9NRH1 226 aa14.53□□□□□ -0.08
CHRNA4-203ENST00000467563 USMG5Q96IX5 58 aa14.53□□□□□ -0.08
CHRNA4-203ENST00000467563 ATP6V0BQ99437 205 aa14.53□□□□□ -0.08
CHRNA4-203ENST00000467563 ZNF586Q9NXT0 402 aa14.53□□□□□ -0.08
CHRNA4-203ENST00000467563 MRPS12O15235 138 aaKnown RBP14.52□□□□□ -0.09
CHRNA4-203ENST00000467563 C2CD4CQ8TF44 421 aa14.52□□□□□ -0.09
CHRNA4-203ENST00000467563 ISOC2Q96AB3 205 aa14.52□□□□□ -0.09
CHRNA4-203ENST00000467563 PRSS22Q9GZN4 317 aa14.52□□□□□ -0.09
CHRNA4-203ENST00000467563 A0A087WWC5 75 aa14.51□□□□□ -0.09
CHRNA4-203ENST00000467563 PGPEP1LA6NFU8 196 aa14.51□□□□□ -0.09
CHRNA4-203ENST00000467563 B4DEV8 164 aa14.51□□□□□ -0.09
CHRNA4-203ENST00000467563 TSPAN4O14817 238 aa14.51□□□□□ -0.09
CHRNA4-203ENST00000467563 TRBV12-3P01733 135 aa14.51□□□□□ -0.09
CHRNA4-203ENST00000467563 HIST1H1EP10412 219 aaKnown RBP14.51□□□□□ -0.09
CHRNA4-203ENST00000467563 RPL35P42766 123 aaKnown RBP14.51□□□□□ -0.09
CHRNA4-203ENST00000467563 RAB9AP51151 201 aa14.51□□□□□ -0.09
CHRNA4-203ENST00000467563 C10orf99Q6UWK7 81 aa14.51□□□□□ -0.09
CHRNA4-203ENST00000467563 BPIFA4PQ86YQ2 179 aa14.51□□□□□ -0.09
CHRNA4-203ENST00000467563 NPFFR1Q9GZQ6 430 aa14.51□□□□□ -0.09
CHRNA4-203ENST00000467563 BMPR1BO00238 502 aa14.51□□□□□ -0.09
CHRNA4-203ENST00000467563 IGHV3-11P01762 117 aa14.51□□□□□ -0.09
CHRNA4-203ENST00000467563 IGHG4P01861 327 aa14.51□□□□□ -0.09
CHRNA4-203ENST00000467563 AURKAIP1Q9NWT8 199 aaPredicted RBP14.51□□□□□ -0.09
CHRNA4-203ENST00000467563 RABAC1Q9UI14 185 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms