RNA–Protein interactions for RNA: ENST00000463147.1

USH2A-203, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 618 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-203ENST00000463147 PDCD5O14737 125 aa1.99□□□□□ -2.09
USH2A-203ENST00000463147 HMGB3O15347 200 aaKnown RBP1.99□□□□□ -2.09
USH2A-203ENST00000463147 GNRH2O43555 120 aa1.99□□□□□ -2.09
USH2A-203ENST00000463147 BANF1O75531 89 aa1.99□□□□□ -2.09
USH2A-203ENST00000463147 PIAS1O75925 651 aa1.99□□□□□ -2.09
USH2A-203ENST00000463147 GADD45GO95257 159 aa1.99□□□□□ -2.09
USH2A-203ENST00000463147 NPYP01303 97 aa1.99□□□□□ -2.09
USH2A-203ENST00000463147 IFNGP01579 166 aa1.99□□□□□ -2.09
USH2A-203ENST00000463147 APOC3P02656 99 aa1.99□□□□□ -2.09
USH2A-203ENST00000463147 OR4E1P0C645 316 aa1.99□□□□□ -2.09
USH2A-203ENST00000463147 DEFA4P12838 97 aa1.99□□□□□ -2.09
USH2A-203ENST00000463147 S100A7P31151 101 aa1.99□□□□□ -2.09
USH2A-203ENST00000463147 GABRA4P48169 554 aa1.99□□□□□ -2.09
USH2A-203ENST00000463147 RAB5CP51148 216 aa1.99□□□□□ -2.09
USH2A-203ENST00000463147 TAS2R41P59536 307 aa1.99□□□□□ -2.09
USH2A-203ENST00000463147 TAS2R20P59543 309 aa1.99□□□□□ -2.09
USH2A-203ENST00000463147 NCS1P62166 190 aa1.99□□□□□ -2.09
USH2A-203ENST00000463147 SMIM15Q7Z3B0 74 aa1.99□□□□□ -2.09
USH2A-203ENST00000463147 OOSP2Q86WS3 158 aa1.99□□□□□ -2.09
USH2A-203ENST00000463147 PDZD9Q8IXQ8 264 aa1.99□□□□□ -2.09
USH2A-203ENST00000463147 LYPD1Q8N2G4 141 aa1.99□□□□□ -2.09
USH2A-203ENST00000463147 OR8D4Q8NGM9 314 aa1.99□□□□□ -2.09
USH2A-203ENST00000463147 CT55Q8WUE5 264 aa1.99□□□□□ -2.09
USH2A-203ENST00000463147 CANT1Q8WVQ1 401 aa1.99□□□□□ -2.09
USH2A-203ENST00000463147 PRRT1Q99946 306 aa1.99□□□□□ -2.09
USH2A-203ENST00000463147 NIPSNAP1Q9BPW8 284 aa1.99□□□□□ -2.09
USH2A-203ENST00000463147 GINS4Q9BRT9 223 aa1.99□□□□□ -2.09
USH2A-203ENST00000463147 TXNL4BQ9NX01 149 aaKnown RBP1.99□□□□□ -2.09
USH2A-203ENST00000463147 FMN2Q9NZ56 1722 aa1.99□□□□□ -2.09
USH2A-203ENST00000463147 MARF1Q9Y4F3 1742 aaKnown RBP1.99□□□□□ -2.09
USH2A-203ENST00000463147 ALKQ9UM73 1620 aa1.99□□□□□ -2.09
USH2A-203ENST00000463147 NRKQ7Z2Y5 1582 aa1.98□□□□□ -2.09
USH2A-203ENST00000463147 ANKRD36CQ5JPF3 1778 aa1.98□□□□□ -2.09
USH2A-203ENST00000463147 MYH9P35579 1960 aaKnown RBP1.98□□□□□ -2.09
USH2A-203ENST00000463147 hCG_1818297A0A087WSY0 165 aa1.98□□□□□ -2.09
USH2A-203ENST00000463147 C9orf170A2RU37 121 aa1.98□□□□□ -2.09
USH2A-203ENST00000463147 A8MT66 165 aa1.98□□□□□ -2.09
USH2A-203ENST00000463147 BBIP1A8MTZ0 92 aa1.98□□□□□ -2.09
USH2A-203ENST00000463147 C3orf84H3BNL1 204 aa1.98□□□□□ -2.09
USH2A-203ENST00000463147 M0QZK8 103 aa1.98□□□□□ -2.09
USH2A-203ENST00000463147 TPST1O60507 370 aa1.98□□□□□ -2.09
USH2A-203ENST00000463147 ATG12O94817 140 aa1.98□□□□□ -2.09
USH2A-203ENST00000463147 ZNF682O95780 498 aa1.98□□□□□ -2.09
USH2A-203ENST00000463147 SMIM17P0DL12 118 aa1.98□□□□□ -2.09
USH2A-203ENST00000463147 HLA-DMBP28068 263 aa1.98□□□□□ -2.09
USH2A-203ENST00000463147 CA5AP35218 305 aa1.98□□□□□ -2.09
USH2A-203ENST00000463147 CSN1S1P47710 185 aa1.98□□□□□ -2.09
USH2A-203ENST00000463147 PKIAP61925 76 aa1.98□□□□□ -2.09
USH2A-203ENST00000463147 HBA1P69905 142 aa1.98□□□□□ -2.09
USH2A-203ENST00000463147 KISS1Q15726 138 aa1.98□□□□□ -2.09
USH2A-203ENST00000463147 RNASE10Q5GAN6 216 aaKnown RBP1.98□□□□□ -2.09
USH2A-203ENST00000463147 ZCCHC23Q6ZST2 131 aa1.98□□□□□ -2.09
USH2A-203ENST00000463147 SVBPQ8N300 66 aa1.98□□□□□ -2.09
USH2A-203ENST00000463147 OR4C16Q8NGL9 310 aa1.98□□□□□ -2.09
USH2A-203ENST00000463147 OR10J5Q8NHC4 309 aa1.98□□□□□ -2.09
USH2A-203ENST00000463147 POP5Q969H6 163 aaKnown RBP1.98□□□□□ -2.09
USH2A-203ENST00000463147 REG4Q9BYZ8 158 aa1.98□□□□□ -2.09
USH2A-203ENST00000463147 IL36BQ9NZH7 164 aa1.98□□□□□ -2.09
USH2A-203ENST00000463147 METTL1Q9UBP6 276 aaKnown RBP1.98□□□□□ -2.09
USH2A-203ENST00000463147 CCL26Q9Y258 94 aa1.98□□□□□ -2.09
USH2A-203ENST00000463147 CYSLTR1Q9Y271 337 aa1.98□□□□□ -2.09
USH2A-203ENST00000463147 NUBP2Q9Y5Y2 271 aa1.98□□□□□ -2.09
USH2A-203ENST00000463147 PTPRMP28827 1452 aa1.98□□□□□ -2.09
USH2A-203ENST00000463147 USP54Q70EL1 1684 aa1.98□□□□□ -2.09
USH2A-203ENST00000463147 NALCNQ8IZF0 1738 aa1.97□□□□□ -2.09
USH2A-203ENST00000463147 NWD2Q9ULI1 1742 aa1.97□□□□□ -2.09
USH2A-203ENST00000463147 SLIT1O75093 1534 aa1.97□□□□□ -2.09
USH2A-203ENST00000463147 A2ML1A8K2U0 1454 aa1.97□□□□□ -2.09
USH2A-203ENST00000463147 LOC100130705A0A1B0GUX0 176 aa1.97□□□□□ -2.09
USH2A-203ENST00000463147 A0A1B0GW54 56 aa1.97□□□□□ -2.09
USH2A-203ENST00000463147 TRAPPC13A5PLN9 417 aa1.97□□□□□ -2.09
USH2A-203ENST00000463147 PRORSD1PA6NEY8 169 aa1.97□□□□□ -2.09
USH2A-203ENST00000463147 E7EQL1 145 aa1.97□□□□□ -2.09
USH2A-203ENST00000463147 GNGT2O14610 69 aa1.97□□□□□ -2.09
USH2A-203ENST00000463147 ZNF73O43830 326 aaPredicted RBP1.97□□□□□ -2.09
USH2A-203ENST00000463147 PROSCO94903 275 aa1.97□□□□□ -2.09
USH2A-203ENST00000463147 S1PR2O95136 353 aa1.97□□□□□ -2.09
USH2A-203ENST00000463147 CD2P06729 351 aa1.97□□□□□ -2.09
USH2A-203ENST00000463147 TSPAN19P0C672 248 aa1.97□□□□□ -2.09
USH2A-203ENST00000463147 CBR1P16152 277 aa1.97□□□□□ -2.09
USH2A-203ENST00000463147 ZNF25P17030 456 aaPredicted RBP1.97□□□□□ -2.09
USH2A-203ENST00000463147 CD24P25063 80 aa1.97□□□□□ -2.09
USH2A-203ENST00000463147 BLVRBP30043 206 aaPredicted RBP1.97□□□□□ -2.09
USH2A-203ENST00000463147 CCR2P41597 374 aa1.97□□□□□ -2.09
USH2A-203ENST00000463147 CCL20P78556 96 aa1.97□□□□□ -2.09
USH2A-203ENST00000463147 TNFRSF9Q07011 255 aa1.97□□□□□ -2.09
USH2A-203ENST00000463147 HES1Q14469 280 aa1.97□□□□□ -2.09
USH2A-203ENST00000463147 PEA15Q15121 130 aa1.97□□□□□ -2.09
USH2A-203ENST00000463147 SS18Q15532 418 aa1.97□□□□□ -2.09
USH2A-203ENST00000463147 MIAQ16674 131 aa1.97□□□□□ -2.09
USH2A-203ENST00000463147 TEX36Q5VZQ5 186 aa1.97□□□□□ -2.09
USH2A-203ENST00000463147 HCP5Q6MZN7 132 aa1.97□□□□□ -2.09
USH2A-203ENST00000463147 ZNF720Q7Z2F6 126 aa1.97□□□□□ -2.09
USH2A-203ENST00000463147 SLC36A1Q7Z2H8 476 aa1.97□□□□□ -2.09
USH2A-203ENST00000463147 OR51T1Q8NGJ9 327 aa1.97□□□□□ -2.09
USH2A-203ENST00000463147 OR9Q1Q8NGQ5 310 aa1.97□□□□□ -2.09
USH2A-203ENST00000463147 OR13C6PQ8NH95 151 aa1.97□□□□□ -2.09
USH2A-203ENST00000463147 GNPDA2Q8TDQ7 276 aa1.97□□□□□ -2.09
USH2A-203ENST00000463147 TMEM203Q969S6 136 aa1.97□□□□□ -2.09
USH2A-203ENST00000463147 C14orf144Q96I85 54 aa1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms