RNA–Protein interactions for RNA: ENST00000462668.5

SMC4-203, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 4,235 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-203ENST00000462668 SRIP30626 198 aa1.65□□□□□ -2.14
SMC4-203ENST00000462668 FUSP35637 526 aaKnown RBP eCLIP1.65□□□□□ -2.14
SMC4-203ENST00000462668 RPL27AP46776 148 aaKnown RBP1.65□□□□□ -2.14
SMC4-203ENST00000462668 TAF6P49848 677 aa1.65□□□□□ -2.14
SMC4-203ENST00000462668 RRN3P1Q2M238 152 aa1.65□□□□□ -2.14
SMC4-203ENST00000462668 SSX8Q7RTT4 187 aa1.65□□□□□ -2.14
SMC4-203ENST00000462668 EIF4E3Q8N5X7 224 aaKnown RBP1.65□□□□□ -2.14
SMC4-203ENST00000462668 C11orf68Q9H3H3 251 aaKnown RBP1.65□□□□□ -2.14
SMC4-203ENST00000462668 R4GN34 69 aa1.65□□□□□ -2.14
SMC4-203ENST00000462668 BOD1L1Q8NFC6 3051 aa1.65□□□□□ -2.14
SMC4-203ENST00000462668 SCN10AQ9Y5Y9 1956 aa1.65□□□□□ -2.14
SMC4-203ENST00000462668 IGSF10Q6WRI0 2623 aa1.65□□□□□ -2.14
SMC4-203ENST00000462668 BIRC6Q9NR09 4857 aa1.65□□□□□ -2.15
SMC4-203ENST00000462668 LY6LH3BQJ8 138 aa1.65□□□□□ -2.15
SMC4-203ENST00000462668 H7BYZ3 331 aa1.65□□□□□ -2.15
SMC4-203ENST00000462668 M0R378 163 aa1.65□□□□□ -2.15
SMC4-203ENST00000462668 PRM2P04554 102 aa1.65□□□□□ -2.15
SMC4-203ENST00000462668 ZNF117Q03924 483 aa1.65□□□□□ -2.15
SMC4-203ENST00000462668 Q5XG85 94 aa1.65□□□□□ -2.15
SMC4-203ENST00000462668 RPL22L1Q6P5R6 122 aaKnown RBP1.65□□□□□ -2.15
SMC4-203ENST00000462668 STX19Q8N4C7 294 aa1.65□□□□□ -2.15
SMC4-203ENST00000462668 MALSU1Q96EH3 234 aa1.65□□□□□ -2.15
SMC4-203ENST00000462668 ADAT3Q96EY9 351 aaPredicted RBP1.65□□□□□ -2.15
SMC4-203ENST00000462668 TVP23BQ9NYZ1 205 aa1.65□□□□□ -2.15
SMC4-203ENST00000462668 THADAQ6YHU6 1953 aa1.65□□□□□ -2.15
SMC4-203ENST00000462668 LOC102725191A0A1B0GVB3 256 aa1.65□□□□□ -2.15
SMC4-203ENST00000462668 PIRO00625 290 aa1.65□□□□□ -2.15
SMC4-203ENST00000462668 NDUFA2O43678 99 aa1.65□□□□□ -2.15
SMC4-203ENST00000462668 CLPSP04118 112 aa1.65□□□□□ -2.15
SMC4-203ENST00000462668 HIST1H2BOP23527 126 aa1.65□□□□□ -2.15
SMC4-203ENST00000462668 HIST1H2BBP33778 126 aa1.65□□□□□ -2.15
SMC4-203ENST00000462668 HIST1H2BDP58876 126 aa1.65□□□□□ -2.15
SMC4-203ENST00000462668 TAS2R20P59543 309 aa1.65□□□□□ -2.15
SMC4-203ENST00000462668 HIST1H2BCP62807 126 aa1.65□□□□□ -2.15
SMC4-203ENST00000462668 HIST2H2BEQ16778 126 aa1.65□□□□□ -2.15
SMC4-203ENST00000462668 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.65□□□□□ -2.15
SMC4-203ENST00000462668 TCF24Q7RTU0 167 aa1.65□□□□□ -2.15
SMC4-203ENST00000462668 C10orf126Q8N4M7 172 aa1.65□□□□□ -2.15
SMC4-203ENST00000462668 C1orf64Q8NEQ6 169 aa1.65□□□□□ -2.15
SMC4-203ENST00000462668 HIST1H2BHQ93079 126 aa1.65□□□□□ -2.15
SMC4-203ENST00000462668 HIST1H2BNQ99877 126 aa1.65□□□□□ -2.15
SMC4-203ENST00000462668 HIST1H2BMQ99879 126 aa1.65□□□□□ -2.15
SMC4-203ENST00000462668 hCG_1818297A0A087WSY0 165 aa1.64□□□□□ -2.15
SMC4-203ENST00000462668 A8MT66 165 aa1.64□□□□□ -2.15
SMC4-203ENST00000462668 H7C1C5 153 aa1.64□□□□□ -2.15
SMC4-203ENST00000462668 GLRXP35754 106 aa1.64□□□□□ -2.15
SMC4-203ENST00000462668 NCALDP61601 193 aa1.64□□□□□ -2.15
SMC4-203ENST00000462668 LCN6P62502 163 aa1.64□□□□□ -2.15
SMC4-203ENST00000462668 KRTAP25-1Q3LHN0 102 aa1.64□□□□□ -2.15
SMC4-203ENST00000462668 RASL11AQ6T310 242 aa1.64□□□□□ -2.15
SMC4-203ENST00000462668 PHF5AQ7RTV0 110 aaKnown RBP1.64□□□□□ -2.15
SMC4-203ENST00000462668 TUBA4BQ9H853 241 aa1.64□□□□□ -2.15
SMC4-203ENST00000462668 CXorf21Q9HAI6 301 aa1.64□□□□□ -2.15
SMC4-203ENST00000462668 BATF3Q9NR55 127 aa1.64□□□□□ -2.15
SMC4-203ENST00000462668 ANKRD17O75179 2603 aaKnown RBP1.64□□□□□ -2.15
SMC4-203ENST00000462668 A8MWP6 167 aa1.64□□□□□ -2.15
SMC4-203ENST00000462668 ZNF73O43830 326 aaPredicted RBP1.64□□□□□ -2.15
SMC4-203ENST00000462668 SERPINA7P05543 415 aa1.64□□□□□ -2.15
SMC4-203ENST00000462668 MSNP26038 577 aaKnown RBP1.64□□□□□ -2.15
SMC4-203ENST00000462668 POLR2HP52434 150 aaKnown RBP1.64□□□□□ -2.15
SMC4-203ENST00000462668 GRK1Q15835 563 aa1.64□□□□□ -2.15
SMC4-203ENST00000462668 DAND5Q8N907 189 aa1.64□□□□□ -2.15
SMC4-203ENST00000462668 OR51T1Q8NGJ9 327 aa1.64□□□□□ -2.15
SMC4-203ENST00000462668 DCANP1Q8TF63 244 aa1.64□□□□□ -2.15
SMC4-203ENST00000462668 DOHHQ9BU89 302 aa1.64□□□□□ -2.15
SMC4-203ENST00000462668 COMMD5Q9GZQ3 224 aa1.64□□□□□ -2.15
SMC4-203ENST00000462668 CRYBG3Q68DQ2 2970 aa1.64□□□□□ -2.15
SMC4-203ENST00000462668 AIPO00170 330 aa1.64□□□□□ -2.15
SMC4-203ENST00000462668 ARPC5O15511 151 aa1.64□□□□□ -2.15
SMC4-203ENST00000462668 PGLYRP1O75594 196 aaPredicted RBP1.64□□□□□ -2.15
SMC4-203ENST00000462668 PIGPP57054 158 aa1.64□□□□□ -2.15
SMC4-203ENST00000462668 KRTAP10-3P60369 221 aa1.64□□□□□ -2.15
SMC4-203ENST00000462668 KRTAP10-5P60370 271 aa1.64□□□□□ -2.15
SMC4-203ENST00000462668 TMEM128Q5BJH2 165 aa1.64□□□□□ -2.15
SMC4-203ENST00000462668 ZNF322Q6U7Q0 402 aaPredicted RBP1.64□□□□□ -2.15
SMC4-203ENST00000462668 RPP25LQ8N5L8 163 aaKnown RBP1.64□□□□□ -2.15
SMC4-203ENST00000462668 PFN4Q8NHR9 129 aa1.64□□□□□ -2.15
SMC4-203ENST00000462668 HIST1H2BAQ96A08 127 aa1.64□□□□□ -2.15
SMC4-203ENST00000462668 C12orf43Q96C57 262 aaKnown RBP1.64□□□□□ -2.15
SMC4-203ENST00000462668 DERL1Q9BUN8 251 aa1.64□□□□□ -2.15
SMC4-203ENST00000462668 TMEM126AQ9H061 195 aa1.64□□□□□ -2.15
SMC4-203ENST00000462668 SPANXA1Q9NS26 97 aa1.64□□□□□ -2.15
SMC4-203ENST00000462668 IL36BQ9NZH7 164 aa1.64□□□□□ -2.15
SMC4-203ENST00000462668 PTPRBP23467 1997 aa1.64□□□□□ -2.15
SMC4-203ENST00000462668 SVILO95425 2214 aa1.64□□□□□ -2.15
SMC4-203ENST00000462668 MEIS3P1A6NDR6 274 aa1.64□□□□□ -2.15
SMC4-203ENST00000462668 CPSF4O95639 269 aaKnown RBP1.64□□□□□ -2.15
SMC4-203ENST00000462668 IFNA10P01566 189 aa1.64□□□□□ -2.15
SMC4-203ENST00000462668 IGHV1-69P01742 117 aa1.64□□□□□ -2.15
SMC4-203ENST00000462668 CRABP1P29762 137 aa1.64□□□□□ -2.15
SMC4-203ENST00000462668 HIST1H4AP62805 103 aaKnown RBP1.64□□□□□ -2.15
SMC4-203ENST00000462668 GNG5P63218 68 aa1.64□□□□□ -2.15
SMC4-203ENST00000462668 DCUN1D2Q6PH85 259 aa1.64□□□□□ -2.15
SMC4-203ENST00000462668 TMPPEQ6ZT21 453 aa1.64□□□□□ -2.15
SMC4-203ENST00000462668 RSPO3Q9BXY4 272 aaPredicted RBP1.64□□□□□ -2.15
SMC4-203ENST00000462668 SMAD5-AS1Q9Y6J3 95 aa1.64□□□□□ -2.15
SMC4-203ENST00000462668 HERC2O95714 4834 aa1.63□□□□□ -2.15
SMC4-203ENST00000462668 PKHD1P08F94 4074 aa1.63□□□□□ -2.15
SMC4-203ENST00000462668 ANKRD12Q6UB98 2062 aa1.63□□□□□ -2.15
SMC4-203ENST00000462668 GADD45GO95257 159 aa1.63□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms